RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 IFIH1Q9BYX4 1025 aaKnown RBP13.93□□□□□ -0.18
HMG20B-211ENST00000486028 RAB34Q9BZG1 259 aa13.93□□□□□ -0.18
HMG20B-211ENST00000486028 CYP26B1Q9NR63 512 aa13.93□□□□□ -0.18
HMG20B-211ENST00000486028 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.93□□□□□ -0.18
HMG20B-211ENST00000486028 WRAP73Q9P2S5 460 aaPredicted RBP13.93□□□□□ -0.18
HMG20B-211ENST00000486028 MSRAQ9UJ68 235 aa13.93□□□□□ -0.18
HMG20B-211ENST00000486028 AKT3Q9Y243 479 aa13.93□□□□□ -0.18
HMG20B-211ENST00000486028 TANC1Q9C0D5 1861 aa13.93□□□□□ -0.18
HMG20B-211ENST00000486028 KDM3AQ9Y4C1 1321 aa13.92□□□□□ -0.18
HMG20B-211ENST00000486028 POTEMA6NI47 508 aa13.92□□□□□ -0.18
HMG20B-211ENST00000486028 GRXCR1A8MXD5 290 aa13.92□□□□□ -0.18
HMG20B-211ENST00000486028 LYPLA2O95372 231 aa13.92□□□□□ -0.18
HMG20B-211ENST00000486028 RFC5P40937 340 aa13.92□□□□□ -0.18
HMG20B-211ENST00000486028 PRPHP41219 470 aa13.92□□□□□ -0.18
HMG20B-211ENST00000486028 FXR2P51116 673 aaKnown RBP eCLIP13.92□□□□□ -0.18
HMG20B-211ENST00000486028 CLCN3P51790 818 aa13.92□□□□□ -0.18
HMG20B-211ENST00000486028 CRYBB1P53674 252 aaPredicted RBP13.92□□□□□ -0.18
HMG20B-211ENST00000486028 WDR5P61964 334 aaKnown RBP13.92□□□□□ -0.18
HMG20B-211ENST00000486028 CDC42EP1Q00587 391 aa13.92□□□□□ -0.18
HMG20B-211ENST00000486028 PDIA5Q14554 519 aa13.92□□□□□ -0.18
HMG20B-211ENST00000486028 RAB30Q15771 203 aa13.92□□□□□ -0.18
HMG20B-211ENST00000486028 TCTN1Q2MV58 587 aa13.92□□□□□ -0.18
HMG20B-211ENST00000486028 PLA2G4FQ68DD2 849 aa13.92□□□□□ -0.18
HMG20B-211ENST00000486028 DTHD1Q6ZMT9 781 aa13.92□□□□□ -0.18
HMG20B-211ENST00000486028 TSHZ1Q6ZSZ6 1077 aa13.92□□□□□ -0.18
HMG20B-211ENST00000486028 FAM43BQ6ZT52 329 aaPredicted RBP13.92□□□□□ -0.18
HMG20B-211ENST00000486028 LRRC71Q8N4P6 559 aa13.92□□□□□ -0.18
HMG20B-211ENST00000486028 CEP89Q96ST8 783 aa13.92□□□□□ -0.18
HMG20B-211ENST00000486028 OSBPL7Q9BZF2 842 aa13.92□□□□□ -0.18
HMG20B-211ENST00000486028 TUFT1Q9NNX1 390 aa13.92□□□□□ -0.18
HMG20B-211ENST00000486028 GINS2Q9Y248 185 aa13.92□□□□□ -0.18
HMG20B-211ENST00000486028 STK24Q9Y6E0 443 aa13.92□□□□□ -0.18
HMG20B-211ENST00000486028 AMHP03971 560 aa13.91□□□□□ -0.18
HMG20B-211ENST00000486028 VTNP04004 478 aa13.91□□□□□ -0.18
HMG20B-211ENST00000486028 XRCC6P12956 609 aaKnown RBP eCLIP13.91□□□□□ -0.18
HMG20B-211ENST00000486028 NPEPPSP55786 919 aa13.91□□□□□ -0.18
HMG20B-211ENST00000486028 KIZQ2M2Z5 673 aa13.91□□□□□ -0.18
HMG20B-211ENST00000486028 XKR9Q5GH70 373 aa13.91□□□□□ -0.18
HMG20B-211ENST00000486028 ODR4Q5SWX8 454 aa13.91□□□□□ -0.18
HMG20B-211ENST00000486028 FERMT3Q86UX7 667 aa13.91□□□□□ -0.18
HMG20B-211ENST00000486028 HERC6Q8IVU3 1022 aa13.91□□□□□ -0.18
HMG20B-211ENST00000486028 LINC01465Q8N7H1 131 aa13.91□□□□□ -0.18
HMG20B-211ENST00000486028 SLC7A3Q8WY07 619 aa13.91□□□□□ -0.18
HMG20B-211ENST00000486028 TIFAQ96CG3 184 aa13.91□□□□□ -0.18
HMG20B-211ENST00000486028 FAM212AQ96EL1 285 aa13.91□□□□□ -0.18
HMG20B-211ENST00000486028 SH2D3AQ9BRG2 576 aa13.91□□□□□ -0.18
HMG20B-211ENST00000486028 POLR3CQ9BUI4 534 aaPredicted RBP13.91□□□□□ -0.18
HMG20B-211ENST00000486028 ANKEF1Q9NU02 776 aa13.91□□□□□ -0.18
HMG20B-211ENST00000486028 LRWD1Q9UFC0 647 aa13.91□□□□□ -0.18
HMG20B-211ENST00000486028 WDR81Q562E7 1941 aa13.9□□□□□ -0.18
HMG20B-211ENST00000486028 IGKV6-21A0A0C4DH24 114 aa13.9□□□□□ -0.18
HMG20B-211ENST00000486028 STX6O43752 255 aa13.9□□□□□ -0.18
HMG20B-211ENST00000486028 GPR32O75388 356 aa13.9□□□□□ -0.18
HMG20B-211ENST00000486028 MAFO75444 373 aaPredicted RBP13.9□□□□□ -0.18
HMG20B-211ENST00000486028 BMP15O95972 392 aa13.9□□□□□ -0.18
HMG20B-211ENST00000486028 SPATA31C1P0DKV0 1188 aa13.9□□□□□ -0.18
HMG20B-211ENST00000486028 PDIA4P13667 645 aaKnown RBP13.9□□□□□ -0.18
HMG20B-211ENST00000486028 DNAJB2P25686 324 aa13.9□□□□□ -0.18
HMG20B-211ENST00000486028 RPA1P27694 616 aa13.9□□□□□ -0.18
HMG20B-211ENST00000486028 CD52P31358 61 aa13.9□□□□□ -0.18
HMG20B-211ENST00000486028 POLGP54098 1239 aaPredicted RBP13.9□□□□□ -0.18
HMG20B-211ENST00000486028 NLRP11P59045 1033 aaKnown RBP13.9□□□□□ -0.18
HMG20B-211ENST00000486028 ATP2C1P98194 919 aaPredicted RBP13.9□□□□□ -0.18
HMG20B-211ENST00000486028 PAK2Q13177 524 aa13.9□□□□□ -0.18
HMG20B-211ENST00000486028 HAUS3Q68CZ6 603 aa13.9□□□□□ -0.18
HMG20B-211ENST00000486028 CATSPER3Q86XQ3 398 aa13.9□□□□□ -0.18
HMG20B-211ENST00000486028 DEFB123Q8N688 67 aa13.9□□□□□ -0.18
HMG20B-211ENST00000486028 ZNF579Q8NAF0 562 aaKnown RBP13.9□□□□□ -0.18
HMG20B-211ENST00000486028 CCDC43Q96MW1 224 aaKnown RBP13.9□□□□□ -0.18
HMG20B-211ENST00000486028 NACC1Q96RE7 527 aa13.9□□□□□ -0.18
HMG20B-211ENST00000486028 ZBED2Q9BTP6 218 aa13.9□□□□□ -0.18
HMG20B-211ENST00000486028 PBX4Q9BYU1 374 aa13.9□□□□□ -0.18
HMG20B-211ENST00000486028 AGO3Q9H9G7 860 aaKnown RBP13.9□□□□□ -0.18
HMG20B-211ENST00000486028 CDHR5Q9HBB8 845 aa13.9□□□□□ -0.18
HMG20B-211ENST00000486028 SUCLA2Q9P2R7 463 aaPredicted RBP13.9□□□□□ -0.18
HMG20B-211ENST00000486028 MTMR6Q9Y217 621 aa13.9□□□□□ -0.18
HMG20B-211ENST00000486028 PCDHA11Q9Y5I1 949 aa13.9□□□□□ -0.18
HMG20B-211ENST00000486028 EVPLQ92817 2033 aa13.9□□□□□ -0.18
HMG20B-211ENST00000486028 TMEM265A0A087WTH1 108 aa13.89□□□□□ -0.19
HMG20B-211ENST00000486028 ZBTB39O15060 712 aa13.89□□□□□ -0.19
HMG20B-211ENST00000486028 GPR182O15218 404 aa13.89□□□□□ -0.19
HMG20B-211ENST00000486028 GAS2O43903 313 aaKnown RBP13.89□□□□□ -0.19
HMG20B-211ENST00000486028 MED24O75448 989 aa13.89□□□□□ -0.19
HMG20B-211ENST00000486028 RPS6KA5O75582 802 aa13.89□□□□□ -0.19
HMG20B-211ENST00000486028 MUTP22033 750 aa13.89□□□□□ -0.19
HMG20B-211ENST00000486028 CCT6AP40227 531 aaKnown RBP13.89□□□□□ -0.19
HMG20B-211ENST00000486028 PBX2P40425 430 aa13.89□□□□□ -0.19
HMG20B-211ENST00000486028 RABGGTBP53611 331 aa13.89□□□□□ -0.19
HMG20B-211ENST00000486028 DEFB103AP81534 67 aa13.89□□□□□ -0.19
HMG20B-211ENST00000486028 ZNF697Q5TEC3 545 aa13.89□□□□□ -0.19
HMG20B-211ENST00000486028 ARL6IP4Q66PJ3 421 aaKnown RBP13.89□□□□□ -0.19
HMG20B-211ENST00000486028 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.89□□□□□ -0.19
HMG20B-211ENST00000486028 IGSF22Q8N9C0 903 aa13.89□□□□□ -0.19
HMG20B-211ENST00000486028 NLRP7Q8WX94 980 aa13.89□□□□□ -0.19
HMG20B-211ENST00000486028 SCLT1Q96NL6 688 aa13.89□□□□□ -0.19
HMG20B-211ENST00000486028 PPP1R16BQ96T49 567 aa13.89□□□□□ -0.19
HMG20B-211ENST00000486028 OSMRQ99650 979 aa13.89□□□□□ -0.19
HMG20B-211ENST00000486028 FTHL17Q9BXU8 183 aa13.89□□□□□ -0.19
HMG20B-211ENST00000486028 ADAMTS10Q9H324 1103 aa13.89□□□□□ -0.19
HMG20B-211ENST00000486028 ZSCAN16Q9H4T2 348 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms