RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 SESN3P58005 492 aa5.15□□□□□ -1.59
RTN4-213ENST00000485749 ERVK-21P61565 698 aa5.15□□□□□ -1.59
RTN4-213ENST00000485749 DMTNQ08495 405 aa5.15□□□□□ -1.59
RTN4-213ENST00000485749 GRM1Q13255 1194 aa5.15□□□□□ -1.59
RTN4-213ENST00000485749 LVRNQ6Q4G3 990 aa5.15□□□□□ -1.59
RTN4-213ENST00000485749 MCM10Q7L590 875 aa5.15□□□□□ -1.59
RTN4-213ENST00000485749 SPACA3Q8IXA5 215 aa5.15□□□□□ -1.59
RTN4-213ENST00000485749 CPA6Q8N4T0 437 aa5.15□□□□□ -1.59
RTN4-213ENST00000485749 NKAIN3Q8N8D7 197 aa5.15□□□□□ -1.59
RTN4-213ENST00000485749 FBXO15Q8NCQ5 510 aaPredicted RBP5.15□□□□□ -1.59
RTN4-213ENST00000485749 DNAJB8Q8NHS0 232 aa5.15□□□□□ -1.59
RTN4-213ENST00000485749 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.15□□□□□ -1.593e-47■□□□□ 9.6
RTN4-213ENST00000485749 COG1Q8WTW3 980 aa5.15□□□□□ -1.59
RTN4-213ENST00000485749 TTC17Q96AE7 1141 aa5.15□□□□□ -1.59
RTN4-213ENST00000485749 TNIP3Q96KP6 325 aa5.15□□□□□ -1.59
RTN4-213ENST00000485749 KREMEN1Q96MU8 473 aa5.15□□□□□ -1.59
RTN4-213ENST00000485749 AIFM3Q96NN9 605 aa5.15□□□□□ -1.59
RTN4-213ENST00000485749 FAM167BQ9BTA0 163 aa5.15□□□□□ -1.59
RTN4-213ENST00000485749 CABP5Q9NP86 173 aa5.15□□□□□ -1.59
RTN4-213ENST00000485749 HELLSQ9NRZ9 838 aa5.15□□□□□ -1.59
RTN4-213ENST00000485749 B4GALT6Q9UBX8 382 aa5.15□□□□□ -1.59
RTN4-213ENST00000485749 TBK1Q9UHD2 729 aa5.15□□□□□ -1.59
RTN4-213ENST00000485749 RCAN3Q9UKA8 241 aa5.15□□□□□ -1.59
RTN4-213ENST00000485749 ZKSCAN5Q9Y2L8 839 aa5.15□□□□□ -1.59
RTN4-213ENST00000485749 LUC7L2Q9Y383 392 aaKnown RBP5.15□□□□□ -1.59
RTN4-213ENST00000485749 NPFFR2Q9Y5X5 522 aa5.15□□□□□ -1.59
RTN4-213ENST00000485749 BLACEA4D250 179 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 ZNF503-AS2A6NEH8 195 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 TSPY2A6NKD2 308 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 FAM25EA8MYX2 175 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 FAM155AB1AL88 458 aaPredicted RBP5.14□□□□□ -1.59
RTN4-213ENST00000485749 FZD9O00144 591 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 CCP110O43303 1012 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 TPM3P06753 285 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 TSPY3P0CV98 308 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 TSPY8P0CW00 308 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 TYRP1P17643 537 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 DESP17661 470 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 HPDP32754 393 aaPredicted RBP5.14□□□□□ -1.59
RTN4-213ENST00000485749 ETV3P41162 512 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 MAPK9P45984 424 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 IL2P60568 153 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 GPR85P60893 370 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 AMPD2Q01433 879 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 TSPY1Q01534 308 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 ROR1Q01973 937 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 GUCY1A3Q02108 690 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 EIF2B5Q13144 721 aaKnown RBP5.14□□□□□ -1.59
RTN4-213ENST00000485749 PRKG2Q13237 762 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 KLF1Q13351 362 aaPredicted RBP5.14□□□□□ -1.59
RTN4-213ENST00000485749 SF3B3Q15393 1217 aaKnown RBP5.14□□□□□ -1.59
RTN4-213ENST00000485749 SF1Q15637 639 aaKnown RBP5.14□□□□□ -1.59
RTN4-213ENST00000485749 INF2Q27J81 1249 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 ATP13A4Q4VNC1 1196 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 COBLL1Q53SF7 1204 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 KIAA1614Q5VZ46 1190 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 SYDE1Q6ZW31 735 aaPredicted RBP5.14□□□□□ -1.59
RTN4-213ENST00000485749 CATSPER4Q7RTX7 472 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 KREMEN2Q8NCW0 462 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 ADCY4Q8NFM4 1077 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 GSDMBQ8TAX9 411 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 USP33Q8TEY7 942 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 RNF141Q8WVD5 230 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 SH3KBP1Q96B97 665 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 COX4I2Q96KJ9 171 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 HEXIM2Q96MH2 286 aaKnown RBP5.14□□□□□ -1.59
RTN4-213ENST00000485749 UIMC1Q96RL1 719 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 DPH2Q9BQC3 489 aaPredicted RBP5.14□□□□□ -1.59
RTN4-213ENST00000485749 EIF2AK1Q9BQI3 630 aaKnown RBP5.14□□□□□ -1.59
RTN4-213ENST00000485749 NUDT16L1Q9BRJ7 211 aaKnown RBP5.14□□□□□ -1.59
RTN4-213ENST00000485749 CELF4Q9BZC1 486 aaKnown RBP5.14□□□□□ -1.59
RTN4-213ENST00000485749 RASSF1Q9NS23 344 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 ZNHIT6Q9NWK9 470 aaKnown RBP5.14□□□□□ -1.59
RTN4-213ENST00000485749 C6orf203Q9P0P8 240 aaPredicted RBP5.14□□□□□ -1.59
RTN4-213ENST00000485749 EPS15L1Q9UBC2 864 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.14□□□□□ -1.59
RTN4-213ENST00000485749 PCSK1NQ9UHG2 260 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 RAPGEFL1Q9UHV5 662 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 FBXL21Q9UKT6 434 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 TPCN1Q9ULQ1 816 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 TRAF6Q9Y4K3 522 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 PCDHA9Q9Y5H5 950 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 ITIH6Q6UXX5 1313 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 PITPNM2Q9BZ72 1349 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 ASXL2Q76L83 1435 aa5.14□□□□□ -1.59
RTN4-213ENST00000485749 KLRG2A4D1S0 409 aaPredicted RBP5.13□□□□□ -1.59
RTN4-213ENST00000485749 VGLL3A8MV65 326 aa5.13□□□□□ -1.59
RTN4-213ENST00000485749 J3KRW8 73 aa5.13□□□□□ -1.59
RTN4-213ENST00000485749 TOR1BO14657 336 aa5.13□□□□□ -1.59
RTN4-213ENST00000485749 WNT9AO14904 365 aa5.13□□□□□ -1.59
RTN4-213ENST00000485749 GLRX3O76003 335 aaKnown RBP5.13□□□□□ -1.59
RTN4-213ENST00000485749 MYBL2P10244 700 aa5.13□□□□□ -1.59
RTN4-213ENST00000485749 STT3AP46977 705 aa5.13□□□□□ -1.59
RTN4-213ENST00000485749 UBASH3AP57075 661 aa5.13□□□□□ -1.59
RTN4-213ENST00000485749 UBXN2AP68543 259 aa5.13□□□□□ -1.59
RTN4-213ENST00000485749 MRPS35P82673 323 aaKnown RBP5.13□□□□□ -1.59
RTN4-213ENST00000485749 APBA1Q02410 837 aa5.13□□□□□ -1.59
RTN4-213ENST00000485749 COX10Q12887 443 aa5.13□□□□□ -1.59
RTN4-213ENST00000485749 MRPL28Q13084 256 aaKnown RBP5.13□□□□□ -1.59
RTN4-213ENST00000485749 PPP2R5CQ13362 524 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms