RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 SPDYE3A6NKU9 549 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 TMCO5BA8MYB1 307 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 HMGB1P1B2RPK0 211 aaPredicted RBP5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 ERVV-1B6SEH8 477 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 ANKRD65E5RJM6 399 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 FAM229AH3BQW9 127 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 CES2O00748 559 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 NDUFAB1O14561 156 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 IRS4O14654 1257 aaPredicted RBP5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 CHUKO15111 745 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 ZNF185O15231 689 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 PRKAB2O43741 272 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 PRDM1O75626 825 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 KIAA0754O94854 1291 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 PAEPP09466 180 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 TRIM21P19474 475 aaKnown RBP5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 ATP2B4P23634 1241 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 GPTP24298 496 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 BRD2P25440 801 aaKnown RBP5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 TARSP26639 723 aaKnown RBP5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 GRNP28799 593 aaKnown RBP5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 LSP1P33241 339 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 HSPA9P38646 679 aaKnown RBP5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 KIF11P52732 1056 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 SETQ01105 290 aaPredicted RBP5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 MLLT1Q03111 559 aaPredicted RBP5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 ACTN3Q08043 901 aaPredicted RBP5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 PDCLQ13371 301 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 ORC2Q13416 577 aaPredicted RBP5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 EZH2Q15910 746 aaKnown RBP5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 PTGISQ16647 500 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 ASTE1Q2TB18 679 aaPredicted RBP5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 PRRT3Q5FWE3 981 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 FKBP15Q5T1M5 1219 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 IFIT1BQ5T764 474 aaKnown RBP5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 NAA35Q5VZE5 725 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 GALNT17Q6IS24 598 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 C8orf74Q6P047 294 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 C6orf89Q6UWU4 347 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 IQCA1Q86XH1 822 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 IFT20Q8IY31 132 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 Q8N3U1 123 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 MAGEC3Q8TD91 643 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 SYN2Q92777 582 aaPredicted RBP5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 P3H4Q92791 437 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 CLP1Q92989 425 aaKnown RBP5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 ARL8AQ96BM9 186 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 CNOT6LQ96LI5 555 aaKnown RBP5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 AK8Q96MA6 479 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 ZIM3Q96PE6 472 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 RUFY1Q96T51 708 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 C7orf25Q9BPX7 421 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 RIOK1Q9BRS2 568 aaKnown RBP5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 TUBGCP2Q9BSJ2 902 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 LRRC1Q9BTT6 524 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 IFIH1Q9BYX4 1025 aaKnown RBP5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 ACTR5Q9H9F9 607 aaPredicted RBP5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 JADE2Q9NQC1 790 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 ARHGAP20Q9P2F6 1191 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 LRWD1Q9UFC0 647 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 SIK3Q9Y2K2 1263 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 PCDHA13Q9Y5I0 950 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 PHLPP1O60346 1717 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 MYH6P13533 1939 aa5.17□□□□□ -1.58
SMARCC1-206ENST00000485737 TNRC6CQ9HCJ0 1690 aaKnown RBP5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 MACROD2A1Z1Q3 448 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 C5orf60A6NFR6 353 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 ZNF233A6NK53 670 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 BTNL10A8MVZ5 291 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 OPLAHO14841 1288 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 LILRB5O75023 590 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 COBLO75128 1261 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 XYLBO75191 536 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 RASSF9O75901 435 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 STARD3NLO95772 234 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 FAM107AO95990 144 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 ITGB2P05107 769 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 IL2RBP14784 551 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 CPB1P15086 417 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 NR1D1P20393 614 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 MAP2K2P36507 400 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 PAFAH1B1P43034 410 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 BAG6P46379 1132 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 MAN2A1Q16706 1144 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 CCDC96Q2M329 555 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 CFAP221Q4G0U5 840 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 PREPLQ4J6C6 727 aaPredicted RBP5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 TRAPPC3LQ5T215 181 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 CFAP58Q5T655 872 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 WLSQ5T9L3 541 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 FBXW10Q5XX13 1052 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 PPP4R3AQ6IN85 833 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 PSAPL1Q6NUJ1 521 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 CNNM4Q6P4Q7 775 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 PIK3AP1Q6ZUJ8 805 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 CCDC84Q86UT8 332 aaPredicted RBP5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 FAM35AQ86V20 835 aa5.16□□□□□ -1.58
SMARCC1-206ENST00000485737 CERS3Q8IU89 383 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 519.2 ms