RNA–Protein interactions for RNA: ENST00000485140.1

VPS50-217, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-217ENST00000485140 MAN2A1Q16706 1144 aa5.19□□□□□ -1.58
VPS50-217ENST00000485140 DGKDQ16760 1214 aa5.19□□□□□ -1.58
VPS50-217ENST00000485140 MIIPQ5JXC2 388 aa5.19□□□□□ -1.58
VPS50-217ENST00000485140 SPDYAQ5MJ70 313 aa5.19□□□□□ -1.58
VPS50-217ENST00000485140 MAMDC4Q6UXC1 1216 aa5.19□□□□□ -1.58
VPS50-217ENST00000485140 KIF18BQ86Y91 864 aa5.19□□□□□ -1.58
VPS50-217ENST00000485140 PALM2Q8IXS6 379 aa5.19□□□□□ -1.58
VPS50-217ENST00000485140 FUKQ8N0W3 1084 aa5.19□□□□□ -1.58
VPS50-217ENST00000485140 THEMISQ8N1K5 641 aaPredicted RBP5.19□□□□□ -1.58
VPS50-217ENST00000485140 IGSF22Q8N9C0 903 aa5.19□□□□□ -1.58
VPS50-217ENST00000485140 SLC16A11Q8NCK7 471 aa5.19□□□□□ -1.58
VPS50-217ENST00000485140 RABGGTAQ92696 567 aa5.19□□□□□ -1.58
VPS50-217ENST00000485140 SLC7A6OSQ96CW6 309 aaPredicted RBP5.19□□□□□ -1.58
VPS50-217ENST00000485140 WWC2-AS2Q96NR7 200 aa5.19□□□□□ -1.58
VPS50-217ENST00000485140 GNRHR2Q96P88 292 aa5.19□□□□□ -1.58
VPS50-217ENST00000485140 PLA2G12BQ9BX93 195 aa5.19□□□□□ -1.58
VPS50-217ENST00000485140 AMNQ9BXJ7 453 aa5.19□□□□□ -1.58
VPS50-217ENST00000485140 TRIM39Q9HCM9 518 aa5.19□□□□□ -1.58
VPS50-217ENST00000485140 KCMF1Q9P0J7 381 aa5.19□□□□□ -1.58
VPS50-217ENST00000485140 PRAMEF22A3QJZ6 481 aa5.18□□□□□ -1.58
VPS50-217ENST00000485140 PPFIA4O75335 1185 aa5.18□□□□□ -1.58
VPS50-217ENST00000485140 FSHBP01225 129 aa5.18□□□□□ -1.58
VPS50-217ENST00000485140 ACO1P21399 889 aaKnown RBP5.18□□□□□ -1.58
VPS50-217ENST00000485140 MC4RP32245 332 aa5.18□□□□□ -1.58
VPS50-217ENST00000485140 MCM7P33993 719 aa5.18□□□□□ -1.58
VPS50-217ENST00000485140 ADCY8P40145 1251 aa5.18□□□□□ -1.58
VPS50-217ENST00000485140 HMGA2P52926 109 aa5.18□□□□□ -1.58
VPS50-217ENST00000485140 FOXE3Q13461 319 aa5.18□□□□□ -1.58
VPS50-217ENST00000485140 EPHA7Q15375 998 aa5.18□□□□□ -1.58
VPS50-217ENST00000485140 GAGE13Q4V321 117 aa5.18□□□□□ -1.58
VPS50-217ENST00000485140 TTC38Q5R3I4 469 aa5.18□□□□□ -1.58
VPS50-217ENST00000485140 AMER2Q8N7J2 671 aa5.18□□□□□ -1.58
VPS50-217ENST00000485140 SHCBP1Q8NEM2 672 aa5.18□□□□□ -1.58
VPS50-217ENST00000485140 PMFBP1Q8TBY8 1022 aa5.18□□□□□ -1.58
VPS50-217ENST00000485140 UBXN4Q92575 508 aa5.18□□□□□ -1.58
VPS50-217ENST00000485140 OR14A2Q96R54 314 aa5.18□□□□□ -1.58
VPS50-217ENST00000485140 PTPN18Q99952 460 aa5.18□□□□□ -1.58
VPS50-217ENST00000485140 SLC6A15Q9H2J7 730 aa5.18□□□□□ -1.58
VPS50-217ENST00000485140 MAGEC2Q9UBF1 373 aaPredicted RBP5.18□□□□□ -1.58
VPS50-217ENST00000485140 FAM184BQ9ULE4 1060 aa5.18□□□□□ -1.58
VPS50-217ENST00000485140 GIT1Q9Y2X7 761 aa5.18□□□□□ -1.58
VPS50-217ENST00000485140 UBA6A0AVT1 1052 aaPredicted RBP5.17□□□□□ -1.58
VPS50-217ENST00000485140 OPA1O60313 960 aa5.17□□□□□ -1.58
VPS50-217ENST00000485140 KIF11P52732 1056 aa5.17□□□□□ -1.58
VPS50-217ENST00000485140 NRN1LQ496H8 165 aa5.17□□□□□ -1.58
VPS50-217ENST00000485140 CATSPEREQ5SY80 951 aa5.17□□□□□ -1.58
VPS50-217ENST00000485140 MFSD5Q6N075 450 aa5.17□□□□□ -1.58
VPS50-217ENST00000485140 TIGD7Q6NT04 549 aaPredicted RBP5.17□□□□□ -1.58
VPS50-217ENST00000485140 BMP8AQ7Z5Y6 402 aa5.17□□□□□ -1.58
VPS50-217ENST00000485140 FILIP1Q7Z7B0 1213 aa5.17□□□□□ -1.58
VPS50-217ENST00000485140 PASD1Q8IV76 773 aa5.17□□□□□ -1.58
VPS50-217ENST00000485140 GCDHQ92947 438 aaPredicted RBP5.17□□□□□ -1.58
VPS50-217ENST00000485140 SCLYQ96I15 445 aa5.17□□□□□ -1.58
VPS50-217ENST00000485140 MAML3Q96JK9 1138 aa5.17□□□□□ -1.58
VPS50-217ENST00000485140 DPYSL5Q9BPU6 564 aa5.17□□□□□ -1.58
VPS50-217ENST00000485140 ORAI3Q9BRQ5 295 aa5.17□□□□□ -1.58
VPS50-217ENST00000485140 ZNF341Q9BYN7 854 aa5.17□□□□□ -1.58
VPS50-217ENST00000485140 ZNF703Q9H7S9 590 aaPredicted RBP5.17□□□□□ -1.58
VPS50-217ENST00000485140 PLA2G3Q9NZ20 509 aa5.17□□□□□ -1.58
VPS50-217ENST00000485140 SAMD15Q9P1V8 674 aa5.17□□□□□ -1.58
VPS50-217ENST00000485140 CDK11AQ9UQ88 783 aaPredicted RBP5.17□□□□□ -1.58
VPS50-217ENST00000485140 DAPK3O43293 454 aa5.16□□□□□ -1.58
VPS50-217ENST00000485140 MECP2P51608 486 aaKnown RBP5.16□□□□□ -1.58
VPS50-217ENST00000485140 OCRLQ01968 901 aa5.16□□□□□ -1.58
VPS50-217ENST00000485140 HGFACQ04756 655 aa5.16□□□□□ -1.58
VPS50-217ENST00000485140 DUSP8Q13202 625 aa5.16□□□□□ -1.58
VPS50-217ENST00000485140 GRM7Q14831 915 aa5.16□□□□□ -1.58
VPS50-217ENST00000485140 TAF7LQ5H9L4 462 aa5.16□□□□□ -1.58
VPS50-217ENST00000485140 SLFN12LQ6IEE8 588 aa5.16□□□□□ -1.58
VPS50-217ENST00000485140 DRC1Q96MC2 740 aa5.16□□□□□ -1.58
VPS50-217ENST00000485140 PARPBPQ9NWS1 579 aa5.16□□□□□ -1.58
VPS50-217ENST00000485140 PTPN22Q9Y2R2 807 aa5.16□□□□□ -1.58
VPS50-217ENST00000485140 CTDP1Q9Y5B0 961 aaPredicted RBP5.16□□□□□ -1.58
VPS50-217ENST00000485140 PRLP01236 227 aa5.15□□□□□ -1.59
VPS50-217ENST00000485140 AMHP03971 560 aa5.15□□□□□ -1.59
VPS50-217ENST00000485140 PTH1RQ03431 593 aa5.15□□□□□ -1.59
VPS50-217ENST00000485140 SEC23AQ15436 765 aa5.15□□□□□ -1.59
VPS50-217ENST00000485140 TCEA2Q15560 299 aa5.15□□□□□ -1.59
VPS50-217ENST00000485140 USP39Q53GS9 565 aaKnown RBP5.15□□□□□ -1.59
VPS50-217ENST00000485140 LARP4Q71RC2 724 aaKnown RBP eCLIP5.15□□□□□ -1.59
VPS50-217ENST00000485140 RTN4RL1Q86UN2 441 aaPredicted RBP5.15□□□□□ -1.59
VPS50-217ENST00000485140 D2HGDHQ8N465 521 aa5.15□□□□□ -1.59
VPS50-217ENST00000485140 OR5AN1Q8NGI8 311 aa5.15□□□□□ -1.59
VPS50-217ENST00000485140 CFHR4Q92496 578 aa5.15□□□□□ -1.59
VPS50-217ENST00000485140 KIAA1683Q9H0B3 1180 aa5.15□□□□□ -1.59
VPS50-217ENST00000485140 USP36Q9P275 1121 aaKnown RBP5.15□□□□□ -1.59
VPS50-217ENST00000485140 B4GALT6Q9UBX8 382 aa5.15□□□□□ -1.59
VPS50-217ENST00000485140 CDC42EP3Q9UKI2 254 aa5.15□□□□□ -1.59
VPS50-217ENST00000485140 DENND2AQ9ULE3 1009 aa5.15□□□□□ -1.59
VPS50-217ENST00000485140 ZKSCAN5Q9Y2L8 839 aa5.15□□□□□ -1.59
VPS50-217ENST00000485140 A0A1W2PRX2 142 aa5.14□□□□□ -1.59
VPS50-217ENST00000485140 KRTAP23-1A1A580 65 aa5.14□□□□□ -1.59
VPS50-217ENST00000485140 M0R2C6 588 aa5.14□□□□□ -1.59
VPS50-217ENST00000485140 KCNK3O14649 394 aa5.14□□□□□ -1.59
VPS50-217ENST00000485140 NRP1O14786 923 aa5.14□□□□□ -1.59
VPS50-217ENST00000485140 JUNP05412 331 aaKnown RBP5.14□□□□□ -1.59
VPS50-217ENST00000485140 ZBTB48P10074 688 aaPredicted RBP5.14□□□□□ -1.59
VPS50-217ENST00000485140 KCNA6P17658 529 aa5.14□□□□□ -1.59
VPS50-217ENST00000485140 HIBADHP31937 336 aaKnown RBP5.14□□□□□ -1.59
VPS50-217ENST00000485140 MSX2P35548 267 aaPredicted RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms