RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 LINC01465Q8N7H1 131 aa18.17■□□□□ 0.5
DDR1-246ENST00000485023 TMEM40Q8WWA1 233 aa18.17■□□□□ 0.5
DDR1-246ENST00000485023 APBB2Q92870 758 aa18.17■□□□□ 0.5
DDR1-246ENST00000485023 CEP170P1Q96L14 293 aa18.17■□□□□ 0.5
DDR1-246ENST00000485023 SCLT1Q96NL6 688 aa18.17■□□□□ 0.5
DDR1-246ENST00000485023 CYP26B1Q9NR63 512 aa18.17■□□□□ 0.5
DDR1-246ENST00000485023 PTPRSQ13332 1948 aa18.17■□□□□ 0.5
DDR1-246ENST00000485023 TLL1O43897 1013 aa18.16■□□□□ 0.5
DDR1-246ENST00000485023 EFCAB14O75071 495 aa18.16■□□□□ 0.5
DDR1-246ENST00000485023 UPP2O95045 317 aa18.16■□□□□ 0.5
DDR1-246ENST00000485023 CA3P07451 260 aa18.16■□□□□ 0.5
DDR1-246ENST00000485023 NLRP11P59045 1033 aaKnown RBP18.16■□□□□ 0.5
DDR1-246ENST00000485023 NFX1Q12986 1120 aaKnown RBP18.16■□□□□ 0.5
DDR1-246ENST00000485023 XKR9Q5GH70 373 aa18.16■□□□□ 0.5
DDR1-246ENST00000485023 PPP2R2DQ66LE6 453 aa18.16■□□□□ 0.5
DDR1-246ENST00000485023 C4orf19Q8IY42 314 aa18.16■□□□□ 0.5
DDR1-246ENST00000485023 C4orf32Q8N8J7 132 aa18.16■□□□□ 0.5
DDR1-246ENST00000485023 PHOSPHO2Q8TCD6 241 aa18.16■□□□□ 0.5
DDR1-246ENST00000485023 CEP89Q96ST8 783 aa18.16■□□□□ 0.5
DDR1-246ENST00000485023 SEMA6BQ9H3T3 888 aa18.16■□□□□ 0.5
DDR1-246ENST00000485023 ZNF576Q9H609 170 aa18.16■□□□□ 0.5
DDR1-246ENST00000485023 MTMR10Q9NXD2 777 aa18.16■□□□□ 0.5
DDR1-246ENST00000485023 PADI3Q9ULW8 664 aa18.16■□□□□ 0.5
DDR1-246ENST00000485023 PCDHA11Q9Y5I1 949 aa18.16■□□□□ 0.5
DDR1-246ENST00000485023 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.15■□□□□ 0.5
DDR1-246ENST00000485023 LCHNA4D1U4 455 aa18.15■□□□□ 0.5
DDR1-246ENST00000485023 MAFO75444 373 aaPredicted RBP18.15■□□□□ 0.5
DDR1-246ENST00000485023 RPS6KA5O75582 802 aa18.15■□□□□ 0.5
DDR1-246ENST00000485023 POLGP54098 1239 aaPredicted RBP18.15■□□□□ 0.5
DDR1-246ENST00000485023 MKRN4PQ13434 485 aaPredicted RBP18.15■□□□□ 0.5
DDR1-246ENST00000485023 RILPL1Q5EBL4 403 aa18.15■□□□□ 0.5
DDR1-246ENST00000485023 NEK9Q8TD19 979 aa18.15■□□□□ 0.5
DDR1-246ENST00000485023 PIGOQ8TEQ8 1089 aa18.15■□□□□ 0.5
DDR1-246ENST00000485023 SNX21Q969T3 373 aa18.15■□□□□ 0.5
DDR1-246ENST00000485023 CCDC43Q96MW1 224 aaKnown RBP18.15■□□□□ 0.5
DDR1-246ENST00000485023 GUCD1Q96NT3 240 aa18.15■□□□□ 0.5
DDR1-246ENST00000485023 HSD17B14Q9BPX1 270 aa18.15■□□□□ 0.5
DDR1-246ENST00000485023 SLC28A3Q9HAS3 691 aa18.15■□□□□ 0.5
DDR1-246ENST00000485023 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.15■□□□□ 0.5
DDR1-246ENST00000485023 NOC2LQ9Y3T9 749 aaKnown RBP18.15■□□□□ 0.5
DDR1-246ENST00000485023 KDM3AQ9Y4C1 1321 aa18.15■□□□□ 0.5
DDR1-246ENST00000485023 GPR32O75388 356 aa18.14■□□□□ 0.49
DDR1-246ENST00000485023 MED24O75448 989 aa18.14■□□□□ 0.49
DDR1-246ENST00000485023 ARHGEF15O94989 841 aa18.14■□□□□ 0.49
DDR1-246ENST00000485023 PDCP20941 246 aa18.14■□□□□ 0.49
DDR1-246ENST00000485023 GPC3P51654 580 aa18.14■□□□□ 0.49
DDR1-246ENST00000485023 CRYBB1P53674 252 aaPredicted RBP18.14■□□□□ 0.49
DDR1-246ENST00000485023 GRIN2CQ14957 1233 aa18.14■□□□□ 0.49
DDR1-246ENST00000485023 POTEGQ6S5H5 508 aa18.14■□□□□ 0.49
DDR1-246ENST00000485023 OTUD6AQ7L8S5 288 aa18.14■□□□□ 0.49
DDR1-246ENST00000485023 USP38Q8NB14 1042 aa18.14■□□□□ 0.49
DDR1-246ENST00000485023 NLRP7Q8WX94 980 aa18.14■□□□□ 0.49
DDR1-246ENST00000485023 LINC01599Q8WXQ3 324 aa18.14■□□□□ 0.49
DDR1-246ENST00000485023 SLC7A3Q8WY07 619 aa18.14■□□□□ 0.49
DDR1-246ENST00000485023 INTS4Q96HW7 963 aaKnown RBP18.14■□□□□ 0.49
DDR1-246ENST00000485023 CERS4Q9HA82 394 aa18.14■□□□□ 0.49
DDR1-246ENST00000485023 MICAL3Q7RTP6 2002 aa18.13■□□□□ 0.49
DDR1-246ENST00000485023 PP2D1A8MPX8 630 aa18.13■□□□□ 0.49
DDR1-246ENST00000485023 GJB5O95377 273 aa18.13■□□□□ 0.49
DDR1-246ENST00000485023 HSP90AA1P07900 732 aaKnown RBP18.13■□□□□ 0.49
DDR1-246ENST00000485023 SYT1P21579 422 aa18.13■□□□□ 0.49
DDR1-246ENST00000485023 DNM2P50570 870 aa18.13■□□□□ 0.49
DDR1-246ENST00000485023 EMC2Q15006 297 aa18.13■□□□□ 0.49
DDR1-246ENST00000485023 FAM228AQ86W67 206 aa18.13■□□□□ 0.49
DDR1-246ENST00000485023 CATSPER3Q86XQ3 398 aa18.13■□□□□ 0.49
DDR1-246ENST00000485023 RHPN2Q8IUC4 686 aa18.13■□□□□ 0.49
DDR1-246ENST00000485023 KSR1Q8IVT5 923 aa18.13■□□□□ 0.49
DDR1-246ENST00000485023 SPRYD3Q8NCJ5 442 aa18.13■□□□□ 0.49
DDR1-246ENST00000485023 SLC17A8Q8NDX2 589 aa18.13■□□□□ 0.49
DDR1-246ENST00000485023 ERMNQ8TAM6 284 aa18.13■□□□□ 0.49
DDR1-246ENST00000485023 MYLIPQ8WY64 445 aa18.13■□□□□ 0.49
DDR1-246ENST00000485023 TMEM143Q96AN5 459 aa18.13■□□□□ 0.49
DDR1-246ENST00000485023 SUCLA2Q9P2R7 463 aaPredicted RBP18.13■□□□□ 0.49
DDR1-246ENST00000485023 LRWD1Q9UFC0 647 aa18.13■□□□□ 0.49
DDR1-246ENST00000485023 TMEM265A0A087WTH1 108 aa18.12■□□□□ 0.49
DDR1-246ENST00000485023 IGKV6-21A0A0C4DH24 114 aa18.12■□□□□ 0.49
DDR1-246ENST00000485023 CSDE1O75534 798 aaKnown RBP18.12■□□□□ 0.49
DDR1-246ENST00000485023 SPATA31C1P0DKV0 1188 aa18.12■□□□□ 0.49
DDR1-246ENST00000485023 FGFR4P22455 802 aa18.12■□□□□ 0.49
DDR1-246ENST00000485023 FXR2P51116 673 aaKnown RBP eCLIP18.12■□□□□ 0.494e-6■■■□□ 17.9
DDR1-246ENST00000485023 IL17AQ16552 155 aa18.12■□□□□ 0.49
DDR1-246ENST00000485023 SPRED2Q7Z698 418 aa18.12■□□□□ 0.49
DDR1-246ENST00000485023 NLRP4Q96MN2 994 aa18.12■□□□□ 0.49
DDR1-246ENST00000485023 CDX2Q99626 313 aaPredicted RBP18.12■□□□□ 0.49
DDR1-246ENST00000485023 ADAMTS10Q9H324 1103 aa18.12■□□□□ 0.49
DDR1-246ENST00000485023 TMX1Q9H3N1 280 aa18.12■□□□□ 0.49
DDR1-246ENST00000485023 ERVK-5Q9HDB9 667 aa18.12■□□□□ 0.49
DDR1-246ENST00000485023 TUFT1Q9NNX1 390 aa18.12■□□□□ 0.49
DDR1-246ENST00000485023 ST3GAL5Q9UNP4 418 aa18.12■□□□□ 0.49
DDR1-246ENST00000485023 SQORQ9Y6N5 450 aa18.12■□□□□ 0.49
DDR1-246ENST00000485023 ARID2Q68CP9 1835 aa18.12■□□□□ 0.49
DDR1-246ENST00000485023 EVPLQ92817 2033 aa18.11■□□□□ 0.49
DDR1-246ENST00000485023 ENPP3O14638 875 aa18.11■□□□□ 0.49
DDR1-246ENST00000485023 LYPLA2O95372 231 aa18.11■□□□□ 0.49
DDR1-246ENST00000485023 CCT6AP40227 531 aaKnown RBP18.11■□□□□ 0.49
DDR1-246ENST00000485023 RFC5P40937 340 aa18.11■□□□□ 0.49
DDR1-246ENST00000485023 DTHD1Q6ZMT9 781 aa18.11■□□□□ 0.49
DDR1-246ENST00000485023 BRAPQ7Z569 592 aa18.11■□□□□ 0.49
DDR1-246ENST00000485023 SNX29Q8TEQ0 813 aa18.11■□□□□ 0.49
DDR1-246ENST00000485023 JPH2Q9BR39 696 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms