RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 HOMER2Q9NSB8 354 aa9.07□□□□□ -0.96
UBR3-210ENST00000484596 H2AFY2Q9P0M6 372 aaPredicted RBP9.07□□□□□ -0.96
UBR3-210ENST00000484596 ARHGAP28Q9P2N2 729 aa9.07□□□□□ -0.96
UBR3-210ENST00000484596 CD40P25942 277 aa9.06□□□□□ -0.96
UBR3-210ENST00000484596 ID4P47928 161 aa9.06□□□□□ -0.96
UBR3-210ENST00000484596 CDKN1CP49918 316 aaPredicted RBP9.06□□□□□ -0.96
UBR3-210ENST00000484596 PFKPQ01813 784 aa9.06□□□□□ -0.96
UBR3-210ENST00000484596 EPHA7Q15375 998 aa9.06□□□□□ -0.96
UBR3-210ENST00000484596 DDB1Q16531 1140 aa9.06□□□□□ -0.96
UBR3-210ENST00000484596 SKIDA1Q1XH10 827 aa9.06□□□□□ -0.96
UBR3-210ENST00000484596 CD276Q5ZPR3 534 aa9.06□□□□□ -0.96
UBR3-210ENST00000484596 IQSEC1Q6DN90 963 aa9.06□□□□□ -0.96
UBR3-210ENST00000484596 LIMS2Q7Z4I7 341 aa9.06□□□□□ -0.96
UBR3-210ENST00000484596 NUDT10Q8NFP7 164 aa9.06□□□□□ -0.96
UBR3-210ENST00000484596 SLC5A5Q92911 643 aa9.06□□□□□ -0.96
UBR3-210ENST00000484596 NUDT11Q96G61 164 aa9.06□□□□□ -0.96
UBR3-210ENST00000484596 LOXL4Q96JB6 756 aa9.06□□□□□ -0.96
UBR3-210ENST00000484596 SAMD11Q96NU1 681 aa9.06□□□□□ -0.96
UBR3-210ENST00000484596 PUS7LQ9H0K6 701 aaKnown RBP9.06□□□□□ -0.96
UBR3-210ENST00000484596 SLC5A4Q9NY91 659 aa9.06□□□□□ -0.96
UBR3-210ENST00000484596 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.05□□□□□ -0.96
UBR3-210ENST00000484596 LAMTOR5O43504 91 aa9.05□□□□□ -0.96
UBR3-210ENST00000484596 GLRBP48167 497 aa9.05□□□□□ -0.96
UBR3-210ENST00000484596 SMAD3P84022 425 aaKnown RBP9.05□□□□□ -0.96
UBR3-210ENST00000484596 NFATC3Q12968 1075 aa9.05□□□□□ -0.96
UBR3-210ENST00000484596 SURF1Q15526 300 aa9.05□□□□□ -0.96
UBR3-210ENST00000484596 SMAD2Q15796 467 aaKnown RBP9.05□□□□□ -0.96
UBR3-210ENST00000484596 CATSPEREQ5SY80 951 aa9.05□□□□□ -0.96
UBR3-210ENST00000484596 KBTBD2Q8IY47 623 aa9.05□□□□□ -0.96
UBR3-210ENST00000484596 KLHL36Q8N4N3 616 aa9.05□□□□□ -0.96
UBR3-210ENST00000484596 ASB15Q8WXK1 588 aa9.05□□□□□ -0.96
UBR3-210ENST00000484596 GBP4Q96PP9 640 aa9.05□□□□□ -0.96
UBR3-210ENST00000484596 GPR20Q99678 358 aa9.05□□□□□ -0.96
UBR3-210ENST00000484596 ZDHHC9Q9Y397 364 aa9.05□□□□□ -0.96
UBR3-210ENST00000484596 TGM5O43548 720 aa9.04□□□□□ -0.96
UBR3-210ENST00000484596 RAB11FIP3O75154 756 aa9.04□□□□□ -0.96
UBR3-210ENST00000484596 KLHL18O94889 574 aa9.04□□□□□ -0.96
UBR3-210ENST00000484596 FBXO21O94952 628 aa9.04□□□□□ -0.96
UBR3-210ENST00000484596 INSRRP14616 1297 aa9.04□□□□□ -0.96
UBR3-210ENST00000484596 AOAHP28039 575 aa9.04□□□□□ -0.96
UBR3-210ENST00000484596 GUCY2FP51841 1108 aa9.04□□□□□ -0.96
UBR3-210ENST00000484596 ADAM17P78536 824 aa9.04□□□□□ -0.96
UBR3-210ENST00000484596 TERF2Q15554 542 aa9.04□□□□□ -0.96
UBR3-210ENST00000484596 ZXDCQ2QGD7 858 aaPredicted RBP9.04□□□□□ -0.96
UBR3-210ENST00000484596 GLB1LQ6UWU2 654 aa9.04□□□□□ -0.96
UBR3-210ENST00000484596 PLEKHH3Q7Z736 793 aa9.04□□□□□ -0.96
UBR3-210ENST00000484596 RPUSD2Q8IZ73 545 aaKnown RBP9.04□□□□□ -0.96
UBR3-210ENST00000484596 ZNF610Q8N9Z0 462 aa9.04□□□□□ -0.96
UBR3-210ENST00000484596 HIPK4Q8NE63 616 aa9.04□□□□□ -0.96
UBR3-210ENST00000484596 IGDCC4Q8TDY8 1250 aa9.04□□□□□ -0.96
UBR3-210ENST00000484596 C16orf92Q96LL3 132 aa9.04□□□□□ -0.96
UBR3-210ENST00000484596 KRTAP4-5Q9BYR2 181 aa9.04□□□□□ -0.96
UBR3-210ENST00000484596 BARX1Q9HBU1 254 aaPredicted RBP9.04□□□□□ -0.96
UBR3-210ENST00000484596 PPP4R1LQ9P1A2 415 aa9.04□□□□□ -0.96
UBR3-210ENST00000484596 USP36Q9P275 1121 aaKnown RBP9.04□□□□□ -0.96
UBR3-210ENST00000484596 ARHGAP20Q9P2F6 1191 aa9.04□□□□□ -0.96
UBR3-210ENST00000484596 ZFP69BQ9UJL9 534 aa9.04□□□□□ -0.96
UBR3-210ENST00000484596 GOLGA6L22H0YM25 854 aa9.03□□□□□ -0.96
UBR3-210ENST00000484596 B4GALT4O60513 344 aa9.03□□□□□ -0.96
UBR3-210ENST00000484596 KNG1P01042 644 aa9.03□□□□□ -0.96
UBR3-210ENST00000484596 MMEP08473 750 aa9.03□□□□□ -0.96
UBR3-210ENST00000484596 PTGS1P23219 599 aa9.03□□□□□ -0.96
UBR3-210ENST00000484596 BROXQ5VW32 411 aa9.03□□□□□ -0.96
UBR3-210ENST00000484596 HDGFL2Q7Z4V5 671 aaPredicted RBP9.03□□□□□ -0.96
UBR3-210ENST00000484596 STPG3Q8N7X2 389 aa9.03□□□□□ -0.96
UBR3-210ENST00000484596 BORCS6Q96GS4 357 aa9.03□□□□□ -0.96
UBR3-210ENST00000484596 C8orf49Q96NF6 230 aa9.03□□□□□ -0.96
UBR3-210ENST00000484596 ZNF839A8K0R7 811 aa9.02□□□□□ -0.97
UBR3-210ENST00000484596 PTX3P26022 381 aaPredicted RBP9.02□□□□□ -0.97
UBR3-210ENST00000484596 PPP2CBP62714 309 aa9.02□□□□□ -0.97
UBR3-210ENST00000484596 PPP2CAP67775 309 aa9.02□□□□□ -0.97
UBR3-210ENST00000484596 FRMD7Q6ZUT3 714 aa9.02□□□□□ -0.97
UBR3-210ENST00000484596 LHFPL2Q6ZUX7 228 aa9.02□□□□□ -0.97
UBR3-210ENST00000484596 RASSF3Q86WH2 238 aa9.02□□□□□ -0.97
UBR3-210ENST00000484596 TTC9BQ8N6N2 239 aa9.02□□□□□ -0.97
UBR3-210ENST00000484596 CALML6Q8TD86 181 aa9.02□□□□□ -0.97
UBR3-210ENST00000484596 KRTAP3-1Q9BYR8 98 aa9.02□□□□□ -0.97
UBR3-210ENST00000484596 KCND1Q9NSA2 647 aa9.02□□□□□ -0.97
UBR3-210ENST00000484596 DDX56Q9NY93 547 aaKnown RBP9.02□□□□□ -0.97
UBR3-210ENST00000484596 BTBD7Q9P203 1132 aa9.02□□□□□ -0.97
UBR3-210ENST00000484596 ADAM29Q9UKF5 820 aa9.02□□□□□ -0.97
UBR3-210ENST00000484596 NOC2LQ9Y3T9 749 aaKnown RBP9.02□□□□□ -0.97
UBR3-210ENST00000484596 RASSF10A6NK89 507 aa9.01□□□□□ -0.97
UBR3-210ENST00000484596 IL18BPO95998 194 aa9.01□□□□□ -0.97
UBR3-210ENST00000484596 CHGBP05060 677 aa9.01□□□□□ -0.97
UBR3-210ENST00000484596 EXOSC10Q01780 885 aaKnown RBP9.01□□□□□ -0.97
UBR3-210ENST00000484596 ARHGEF18Q6ZSZ5 1173 aa9.01□□□□□ -0.97
UBR3-210ENST00000484596 PHYKPLQ8IUZ5 450 aa9.01□□□□□ -0.97
UBR3-210ENST00000484596 CEP89Q96ST8 783 aa9.01□□□□□ -0.97
UBR3-210ENST00000484596 ZMAT4Q9H898 229 aa9.01□□□□□ -0.97
UBR3-210ENST00000484596 KCNG1Q9UIX4 513 aa9.01□□□□□ -0.97
UBR3-210ENST00000484596 UBA6A0AVT1 1052 aaPredicted RBP9□□□□□ -0.97
UBR3-210ENST00000484596 NPEPPSL1A6NEC2 478 aa9□□□□□ -0.97
UBR3-210ENST00000484596 EPHB4P54760 987 aa9□□□□□ -0.97
UBR3-210ENST00000484596 EVA1CP58658 441 aa9□□□□□ -0.97
UBR3-210ENST00000484596 TTC38Q5R3I4 469 aa9□□□□□ -0.97
UBR3-210ENST00000484596 TIGD7Q6NT04 549 aaPredicted RBP9□□□□□ -0.97
UBR3-210ENST00000484596 Q6ZUG5 572 aa9□□□□□ -0.97
UBR3-210ENST00000484596 WDR48Q8TAF3 677 aa9□□□□□ -0.97
UBR3-210ENST00000484596 ERCC4Q92889 916 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms