RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 ZNF233A6NK53 670 aa21.46■■□□□ 1.03
LIMS2-215ENST00000484252 EBAG9O00559 213 aa21.46■■□□□ 1.03
LIMS2-215ENST00000484252 HOXA13P31271 388 aaPredicted RBP21.46■■□□□ 1.03
LIMS2-215ENST00000484252 GUCY2FP51841 1108 aa21.46■■□□□ 1.03
LIMS2-215ENST00000484252 GTF2A1P52655 376 aaPredicted RBP21.46■■□□□ 1.03
LIMS2-215ENST00000484252 RNASE9P60153 205 aaKnown RBP21.46■■□□□ 1.03
LIMS2-215ENST00000484252 PEX26Q7Z412 305 aa21.46■■□□□ 1.03
LIMS2-215ENST00000484252 EFCAB13Q8IY85 973 aa21.46■■□□□ 1.03
LIMS2-215ENST00000484252 BCAS4Q8TDM0 211 aa21.46■■□□□ 1.03
LIMS2-215ENST00000484252 RGL1Q9NZL6 768 aa21.46■■□□□ 1.03
LIMS2-215ENST00000484252 STXBP5LQ9Y2K9 1186 aa21.46■■□□□ 1.03
LIMS2-215ENST00000484252 PCDHAC2Q9Y5I4 1007 aa21.46■■□□□ 1.03
LIMS2-215ENST00000484252 ZMYM2Q9UBW7 1377 aa21.46■■□□□ 1.03
LIMS2-215ENST00000484252 BHMG1C9JSJ3 638 aaPredicted RBP21.46■■□□□ 1.03
LIMS2-215ENST00000484252 DDX3XO00571 662 aaKnown RBP eCLIP21.46■■□□□ 1.03
LIMS2-215ENST00000484252 CLIC2O15247 247 aa21.46■■□□□ 1.03
LIMS2-215ENST00000484252 TRIM37O94972 964 aa21.46■■□□□ 1.03
LIMS2-215ENST00000484252 ZBTB48P10074 688 aaPredicted RBP21.46■■□□□ 1.03
LIMS2-215ENST00000484252 PPP2R5CQ13362 524 aa21.46■■□□□ 1.03
LIMS2-215ENST00000484252 LRIG3Q6UXM1 1119 aa21.46■■□□□ 1.03
LIMS2-215ENST00000484252 C1orf186Q6ZWK4 172 aa21.46■■□□□ 1.03
LIMS2-215ENST00000484252 OTOP1Q7RTM1 612 aa21.46■■□□□ 1.03
LIMS2-215ENST00000484252 RASGEF1CQ8N431 466 aa21.46■■□□□ 1.03
LIMS2-215ENST00000484252 KCNQ5Q9NR82 932 aa21.46■■□□□ 1.03
LIMS2-215ENST00000484252 AJAP1Q9UKB5 411 aaPredicted RBP21.46■■□□□ 1.03
LIMS2-215ENST00000484252 PRR12Q9ULL5 1215 aa21.46■■□□□ 1.03
LIMS2-215ENST00000484252 KRT14P02533 472 aa21.45■■□□□ 1.02
LIMS2-215ENST00000484252 LMNB1P20700 586 aa21.45■■□□□ 1.02
LIMS2-215ENST00000484252 MYCT1Q8N699 235 aa21.45■■□□□ 1.02
LIMS2-215ENST00000484252 CYP2W1Q8TAV3 490 aa21.45■■□□□ 1.02
LIMS2-215ENST00000484252 PPM1EQ8WY54 764 aa21.45■■□□□ 1.02
LIMS2-215ENST00000484252 ZFP91Q96JP5 570 aaPredicted RBP21.45■■□□□ 1.02
LIMS2-215ENST00000484252 STK33Q9BYT3 514 aa21.45■■□□□ 1.02
LIMS2-215ENST00000484252 PARVGQ9HBI0 331 aa21.45■■□□□ 1.02
LIMS2-215ENST00000484252 KCND2Q9NZV8 630 aa21.45■■□□□ 1.02
LIMS2-215ENST00000484252 HMGB1P1B2RPK0 211 aaPredicted RBP21.44■■□□□ 1.02
LIMS2-215ENST00000484252 GH2P01242 217 aa21.44■■□□□ 1.02
LIMS2-215ENST00000484252 SOX5P35711 763 aa21.44■■□□□ 1.02
LIMS2-215ENST00000484252 METTL13Q8N6R0 699 aa21.44■■□□□ 1.02
LIMS2-215ENST00000484252 LRRC45Q96CN5 670 aa21.44■■□□□ 1.02
LIMS2-215ENST00000484252 SLITRK6Q9H5Y7 841 aa21.44■■□□□ 1.02
LIMS2-215ENST00000484252 QTRT2Q9H974 415 aaKnown RBP21.44■■□□□ 1.02
LIMS2-215ENST00000484252 NOC2LQ9Y3T9 749 aaKnown RBP21.44■■□□□ 1.02
LIMS2-215ENST00000484252 BRWD3Q6RI45 1802 aa21.44■■□□□ 1.02
LIMS2-215ENST00000484252 COL11A2P13942 1736 aaPredicted RBP21.44■■□□□ 1.02
LIMS2-215ENST00000484252 TMCO5BA8MYB1 307 aa21.44■■□□□ 1.02
LIMS2-215ENST00000484252 PSMD10O75832 226 aa21.44■■□□□ 1.02
LIMS2-215ENST00000484252 SLITRK3O94933 977 aa21.44■■□□□ 1.02
LIMS2-215ENST00000484252 CCDC172P0C7W6 258 aa21.44■■□□□ 1.02
LIMS2-215ENST00000484252 CCT5P48643 541 aa21.44■■□□□ 1.02
LIMS2-215ENST00000484252 ERVK-9P63128 1117 aa21.44■■□□□ 1.02
LIMS2-215ENST00000484252 KCNA1Q09470 495 aa21.44■■□□□ 1.02
LIMS2-215ENST00000484252 CTTNQ14247 550 aaKnown RBP21.44■■□□□ 1.02
LIMS2-215ENST00000484252 LRCH2Q5VUJ6 765 aa21.44■■□□□ 1.02
LIMS2-215ENST00000484252 SLC30A5Q8TAD4 765 aa21.44■■□□□ 1.02
LIMS2-215ENST00000484252 U2AF1L4Q8WU68 220 aaKnown RBP21.44■■□□□ 1.02
LIMS2-215ENST00000484252 SLC5A5Q92911 643 aa21.44■■□□□ 1.02
LIMS2-215ENST00000484252 EHMT1Q9H9B1 1298 aa21.44■■□□□ 1.02
LIMS2-215ENST00000484252 NCANO14594 1321 aa21.43■■□□□ 1.02
LIMS2-215ENST00000484252 FRMPD4Q14CM0 1322 aa21.43■■□□□ 1.02
LIMS2-215ENST00000484252 ZEB2O60315 1214 aa21.43■■□□□ 1.02
LIMS2-215ENST00000484252 ECE2O60344 883 aa21.43■■□□□ 1.02
LIMS2-215ENST00000484252 PPP2R5AQ15172 486 aa21.43■■□□□ 1.02
LIMS2-215ENST00000484252 TTC31Q49AM3 519 aaPredicted RBP21.43■■□□□ 1.02
LIMS2-215ENST00000484252 HS2ST1Q7LGA3 356 aa21.43■■□□□ 1.02
LIMS2-215ENST00000484252 TPH2Q8IWU9 490 aa21.43■■□□□ 1.02
LIMS2-215ENST00000484252 DYDC2Q96IM9 177 aa21.43■■□□□ 1.02
LIMS2-215ENST00000484252 DIS3Q9Y2L1 958 aaKnown RBP21.43■■□□□ 1.02
LIMS2-215ENST00000484252 F8VZ95 297 aa21.43■■□□□ 1.02
LIMS2-215ENST00000484252 HSPA1LP34931 641 aa21.43■■□□□ 1.02
LIMS2-215ENST00000484252 FMO5P49326 533 aa21.43■■□□□ 1.02
LIMS2-215ENST00000484252 PRELPP51888 382 aa21.43■■□□□ 1.02
LIMS2-215ENST00000484252 STAT2P52630 851 aa21.43■■□□□ 1.02
LIMS2-215ENST00000484252 ZNF131P52739 623 aa21.43■■□□□ 1.02
LIMS2-215ENST00000484252 HLTFQ14527 1009 aaKnown RBP eCLIP21.43■■□□□ 1.02
LIMS2-215ENST00000484252 NT5DC3Q86UY8 548 aa21.43■■□□□ 1.02
LIMS2-215ENST00000484252 PIGOQ8TEQ8 1089 aa21.43■■□□□ 1.02
LIMS2-215ENST00000484252 HES6Q96HZ4 224 aa21.43■■□□□ 1.02
LIMS2-215ENST00000484252 ATP6V1G3Q96LB4 118 aa21.43■■□□□ 1.02
LIMS2-215ENST00000484252 WDR18Q9BV38 432 aa21.43■■□□□ 1.02
LIMS2-215ENST00000484252 ODF2LQ9ULJ1 636 aa21.43■■□□□ 1.02
LIMS2-215ENST00000484252 TTC7AQ9ULT0 858 aaPredicted RBP21.43■■□□□ 1.02
LIMS2-215ENST00000484252 KRIT1O00522 736 aa21.42■■□□□ 1.02
LIMS2-215ENST00000484252 SART1O43290 800 aaKnown RBP21.42■■□□□ 1.02
LIMS2-215ENST00000484252 EVI5O60447 810 aa21.42■■□□□ 1.02
LIMS2-215ENST00000484252 TMEM253P0C7T8 217 aa21.42■■□□□ 1.02
LIMS2-215ENST00000484252 NMT1P30419 496 aaKnown RBP21.42■■□□□ 1.02
LIMS2-215ENST00000484252 GJB7Q6PEY0 223 aa21.42■■□□□ 1.02
LIMS2-215ENST00000484252 DAAM2Q86T65 1068 aa21.42■■□□□ 1.02
LIMS2-215ENST00000484252 CCDC26Q8TAB7 109 aa21.42■■□□□ 1.02
LIMS2-215ENST00000484252 NACC1Q96RE7 527 aa21.42■■□□□ 1.02
LIMS2-215ENST00000484252 DMAC2Q9NW81 257 aa21.42■■□□□ 1.02
LIMS2-215ENST00000484252 AMFRQ9UKV5 643 aa21.42■■□□□ 1.02
LIMS2-215ENST00000484252 FRMD4BQ9Y2L6 1034 aa21.42■■□□□ 1.02
LIMS2-215ENST00000484252 A0A087WUV0 522 aaPredicted RBP21.41■■□□□ 1.02
LIMS2-215ENST00000484252 GOLGA6L10A6NI86 522 aa21.41■■□□□ 1.02
LIMS2-215ENST00000484252 SFI1A8K8P3 1242 aa21.41■■□□□ 1.02
LIMS2-215ENST00000484252 GCOM1H8Y6P7 765 aaPredicted RBP21.41■■□□□ 1.02
LIMS2-215ENST00000484252 POLR2MP0CAP2 368 aa21.41■■□□□ 1.02
LIMS2-215ENST00000484252 ECHS1P30084 290 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms