RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 COPS5Q92905 334 aa6.84□□□□□ -1.31
CSDE1-207ENST00000483407 VWCEQ96DN2 955 aa6.84□□□□□ -1.31
CSDE1-207ENST00000483407 CEP63Q96MT8 703 aa6.84□□□□□ -1.31
CSDE1-207ENST00000483407 IWS1Q96ST2 819 aa6.84□□□□□ -1.31
CSDE1-207ENST00000483407 KATNAL1Q9BW62 490 aa6.84□□□□□ -1.31
CSDE1-207ENST00000483407 C1QTNF1Q9BXJ1 281 aa6.84□□□□□ -1.31
CSDE1-207ENST00000483407 RUBCNLQ9H714 662 aa6.84□□□□□ -1.31
CSDE1-207ENST00000483407 CERS4Q9HA82 394 aa6.84□□□□□ -1.31
CSDE1-207ENST00000483407 COG5Q9UP83 839 aa6.84□□□□□ -1.31
CSDE1-207ENST00000483407 MTCH2Q9Y6C9 303 aa6.84□□□□□ -1.31
CSDE1-207ENST00000483407 AK5Q9Y6K8 562 aa6.84□□□□□ -1.31
CSDE1-207ENST00000483407 MCM3APO60318 1980 aa6.83□□□□□ -1.32
CSDE1-207ENST00000483407 DHX16O60231 1041 aaKnown RBP6.83□□□□□ -1.32
CSDE1-207ENST00000483407 ARIH2O95376 493 aa6.83□□□□□ -1.32
CSDE1-207ENST00000483407 MMP3P08254 477 aa6.83□□□□□ -1.32
CSDE1-207ENST00000483407 GOLGA8HP0CJ92 632 aa6.83□□□□□ -1.32
CSDE1-207ENST00000483407 SELPP16109 830 aa6.83□□□□□ -1.32
CSDE1-207ENST00000483407 TFF2Q03403 129 aa6.83□□□□□ -1.32
CSDE1-207ENST00000483407 NMIQ13287 307 aaPredicted RBP6.83□□□□□ -1.32
CSDE1-207ENST00000483407 HDAC1Q13547 482 aaPredicted RBP6.83□□□□□ -1.32
CSDE1-207ENST00000483407 LBRQ14739 615 aaKnown RBP6.83□□□□□ -1.32
CSDE1-207ENST00000483407 STXBP2Q15833 593 aa6.83□□□□□ -1.32
CSDE1-207ENST00000483407 CDC37Q16543 378 aaPredicted RBP6.83□□□□□ -1.32
CSDE1-207ENST00000483407 DGKDQ16760 1214 aa6.83□□□□□ -1.32
CSDE1-207ENST00000483407 ASPRV1Q53RT3 343 aa6.83□□□□□ -1.32
CSDE1-207ENST00000483407 ARHGEF16Q5VV41 709 aa6.83□□□□□ -1.32
CSDE1-207ENST00000483407 CCDC62Q6P9F0 684 aa6.83□□□□□ -1.32
CSDE1-207ENST00000483407 SEPT14Q6ZU15 432 aa6.83□□□□□ -1.32
CSDE1-207ENST00000483407 LRRC8DQ7L1W4 858 aa6.83□□□□□ -1.32
CSDE1-207ENST00000483407 CHST3Q7LGC8 479 aa6.83□□□□□ -1.32
CSDE1-207ENST00000483407 ZNF589Q86UQ0 364 aaPredicted RBP6.83□□□□□ -1.32
CSDE1-207ENST00000483407 SESTD1Q86VW0 696 aa6.83□□□□□ -1.32
CSDE1-207ENST00000483407 TBC1D10CQ8IV04 446 aa6.83□□□□□ -1.32
CSDE1-207ENST00000483407 PGBD3Q8N328 593 aa6.83□□□□□ -1.32
CSDE1-207ENST00000483407 C7orf31Q8N865 590 aa6.83□□□□□ -1.32
CSDE1-207ENST00000483407 SYTL5Q8TDW5 730 aaPredicted RBP6.83□□□□□ -1.32
CSDE1-207ENST00000483407 PPP1R13LQ8WUF5 828 aa6.83□□□□□ -1.32
CSDE1-207ENST00000483407 AFG1LQ8WV93 481 aa6.83□□□□□ -1.32
CSDE1-207ENST00000483407 RILPL2Q969X0 211 aa6.83□□□□□ -1.32
CSDE1-207ENST00000483407 RMDN3Q96TC7 470 aa6.83□□□□□ -1.32
CSDE1-207ENST00000483407 ZKSCAN3Q9BRR0 538 aa6.83□□□□□ -1.32
CSDE1-207ENST00000483407 UBA5Q9GZZ9 404 aa6.83□□□□□ -1.32
CSDE1-207ENST00000483407 KAT14Q9H8E8 782 aa6.83□□□□□ -1.32
CSDE1-207ENST00000483407 GPAMQ9HCL2 828 aa6.83□□□□□ -1.32
CSDE1-207ENST00000483407 TMEM63CQ9P1W3 806 aa6.83□□□□□ -1.32
CSDE1-207ENST00000483407 GMPR2Q9P2T1 348 aaKnown RBP6.83□□□□□ -1.32
CSDE1-207ENST00000483407 FOXD3Q9UJU5 478 aaPredicted RBP6.83□□□□□ -1.32
CSDE1-207ENST00000483407 MRPL11Q9Y3B7 192 aaKnown RBP6.83□□□□□ -1.32
CSDE1-207ENST00000483407 NEDD4P46934 1319 aa6.82□□□□□ -1.32
CSDE1-207ENST00000483407 ABHD14A-ACY1A0A1B0GW23 586 aa6.82□□□□□ -1.32
CSDE1-207ENST00000483407 TERTO14746 1132 aaKnown RBP6.82□□□□□ -1.32
CSDE1-207ENST00000483407 EFCAB14O75071 495 aa6.82□□□□□ -1.32
CSDE1-207ENST00000483407 EIF3JO75822 258 aaKnown RBP6.82□□□□□ -1.32
CSDE1-207ENST00000483407 PARP1P09874 1014 aaKnown RBP6.82□□□□□ -1.32
CSDE1-207ENST00000483407 KCNQ1P51787 676 aa6.82□□□□□ -1.32
CSDE1-207ENST00000483407 RRP1P56182 461 aaKnown RBP6.82□□□□□ -1.32
CSDE1-207ENST00000483407 WDR5P61964 334 aaKnown RBP6.82□□□□□ -1.32
CSDE1-207ENST00000483407 ARHGAP1Q07960 439 aa6.82□□□□□ -1.32
CSDE1-207ENST00000483407 GRB10Q13322 594 aa6.82□□□□□ -1.32
CSDE1-207ENST00000483407 LAMC2Q13753 1193 aa6.82□□□□□ -1.32
CSDE1-207ENST00000483407 LY6KQ17RY6 165 aa6.82□□□□□ -1.32
CSDE1-207ENST00000483407 GDF6Q6KF10 455 aaPredicted RBP6.82□□□□□ -1.32
CSDE1-207ENST00000483407 CNKSR3Q6P9H4 555 aa6.82□□□□□ -1.32
CSDE1-207ENST00000483407 FBXO11Q86XK2 927 aa6.82□□□□□ -1.32
CSDE1-207ENST00000483407 ADGRF4Q8IZF3 695 aa6.82□□□□□ -1.32
CSDE1-207ENST00000483407 TMEM87AQ8NBN3 555 aa6.82□□□□□ -1.32
CSDE1-207ENST00000483407 CCDC74AQ96AQ1 378 aa6.82□□□□□ -1.32
CSDE1-207ENST00000483407 FAM122AQ96E09 287 aa6.82□□□□□ -1.32
CSDE1-207ENST00000483407 NECAB3Q96P71 396 aaPredicted RBP6.82□□□□□ -1.32
CSDE1-207ENST00000483407 TAAR1Q96RJ0 339 aa6.82□□□□□ -1.32
CSDE1-207ENST00000483407 CRBNQ96SW2 442 aa6.82□□□□□ -1.32
CSDE1-207ENST00000483407 BRD7Q9NPI1 651 aa6.82□□□□□ -1.32
CSDE1-207ENST00000483407 LMCD1Q9NZU5 365 aa6.82□□□□□ -1.32
CSDE1-207ENST00000483407 VTI1BQ9UEU0 232 aa6.82□□□□□ -1.32
CSDE1-207ENST00000483407 GTF2IRD1Q9UHL9 959 aa6.82□□□□□ -1.32
CSDE1-207ENST00000483407 MRVI1Q9Y6F6 885 aa6.82□□□□□ -1.32
CSDE1-207ENST00000483407 LRRC37A2A6NM11 1700 aa6.81□□□□□ -1.32
CSDE1-207ENST00000483407 EPOPA6NHQ4 379 aa6.81□□□□□ -1.32
CSDE1-207ENST00000483407 B4E1Z4 1266 aa6.81□□□□□ -1.32
CSDE1-207ENST00000483407 HIP1O00291 1037 aa6.81□□□□□ -1.32
CSDE1-207ENST00000483407 XYLBO75191 536 aa6.81□□□□□ -1.32
CSDE1-207ENST00000483407 ARHGEF15O94989 841 aa6.81□□□□□ -1.32
CSDE1-207ENST00000483407 GJB5O95377 273 aa6.81□□□□□ -1.32
CSDE1-207ENST00000483407 CFBP00751 764 aa6.81□□□□□ -1.32
CSDE1-207ENST00000483407 CXCL10P02778 98 aa6.81□□□□□ -1.32
CSDE1-207ENST00000483407 CKBP12277 381 aa6.81□□□□□ -1.32
CSDE1-207ENST00000483407 EIF2AK2P19525 551 aaKnown RBP6.81□□□□□ -1.32
CSDE1-207ENST00000483407 SDSP20132 328 aa6.81□□□□□ -1.32
CSDE1-207ENST00000483407 PLA2G5P39877 138 aa6.81□□□□□ -1.32
CSDE1-207ENST00000483407 RBL2Q08999 1139 aa6.81□□□□□ -1.32
CSDE1-207ENST00000483407 TRAF1Q13077 416 aa6.81□□□□□ -1.32
CSDE1-207ENST00000483407 IKBKEQ14164 716 aa6.81□□□□□ -1.32
CSDE1-207ENST00000483407 IMMTQ16891 758 aaKnown RBP6.81□□□□□ -1.32
CSDE1-207ENST00000483407 KIAA0753Q2KHM9 967 aa6.81□□□□□ -1.32
CSDE1-207ENST00000483407 QRICH1Q2TAL8 776 aa6.81□□□□□ -1.32
CSDE1-207ENST00000483407 EFHC2Q5JST6 749 aa6.81□□□□□ -1.32
CSDE1-207ENST00000483407 KRT40Q6A162 431 aa6.81□□□□□ -1.32
CSDE1-207ENST00000483407 KCNV1Q6PIU1 500 aa6.81□□□□□ -1.32
CSDE1-207ENST00000483407 DHX37Q8IY37 1157 aaKnown RBP6.81□□□□□ -1.32
CSDE1-207ENST00000483407 PPTC7Q8NI37 304 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms