RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 MENTQ9BUN1 341 aa4.8□□□□□ -1.64
LAPTM4A-202ENST00000483117 AGO3Q9H9G7 860 aaKnown RBP4.8□□□□□ -1.64
LAPTM4A-202ENST00000483117 TLR9Q9NR96 1032 aa4.8□□□□□ -1.64
LAPTM4A-202ENST00000483117 PLA2G3Q9NZ20 509 aa4.8□□□□□ -1.64
LAPTM4A-202ENST00000483117 HIP1RO75146 1068 aa4.79□□□□□ -1.64
LAPTM4A-202ENST00000483117 KRT37O76014 449 aa4.79□□□□□ -1.64
LAPTM4A-202ENST00000483117 ZNF202O95125 648 aa4.79□□□□□ -1.64
LAPTM4A-202ENST00000483117 ZBTB48P10074 688 aaPredicted RBP4.79□□□□□ -1.64
LAPTM4A-202ENST00000483117 STAT3P40763 770 aa4.79□□□□□ -1.64
LAPTM4A-202ENST00000483117 ADAM15Q13444 863 aa4.79□□□□□ -1.64
LAPTM4A-202ENST00000483117 FHL2Q14192 279 aa4.79□□□□□ -1.64
LAPTM4A-202ENST00000483117 ACAP1Q15027 740 aa4.79□□□□□ -1.64
LAPTM4A-202ENST00000483117 LSM12Q3MHD2 195 aaKnown RBP4.79□□□□□ -1.64
LAPTM4A-202ENST00000483117 TMEM177Q53S58 311 aa4.79□□□□□ -1.64
LAPTM4A-202ENST00000483117 BCL6BQ8N143 479 aaPredicted RBP4.79□□□□□ -1.64
LAPTM4A-202ENST00000483117 JMYQ8N9B5 988 aa4.79□□□□□ -1.64
LAPTM4A-202ENST00000483117 ZSWIM2Q8NEG5 633 aa4.79□□□□□ -1.64
LAPTM4A-202ENST00000483117 SHCBP1Q8NEM2 672 aa4.79□□□□□ -1.64
LAPTM4A-202ENST00000483117 PMFBP1Q8TBY8 1022 aa4.79□□□□□ -1.64
LAPTM4A-202ENST00000483117 ARMC5Q96C12 935 aa4.79□□□□□ -1.64
LAPTM4A-202ENST00000483117 MRPL4Q9BYD3 311 aaKnown RBP4.79□□□□□ -1.64
LAPTM4A-202ENST00000483117 TRIM39Q9HCM9 518 aa4.79□□□□□ -1.64
LAPTM4A-202ENST00000483117 MAGEL2Q9UJ55 1249 aa4.79□□□□□ -1.64
LAPTM4A-202ENST00000483117 SLC26A4O43511 780 aa4.78□□□□□ -1.64
LAPTM4A-202ENST00000483117 NARSO43776 548 aaKnown RBP4.78□□□□□ -1.64
LAPTM4A-202ENST00000483117 ACRV1P26436 265 aa4.78□□□□□ -1.64
LAPTM4A-202ENST00000483117 APEX1P27695 318 aaKnown RBP4.78□□□□□ -1.64
LAPTM4A-202ENST00000483117 HIBADHP31937 336 aaKnown RBP4.78□□□□□ -1.64
LAPTM4A-202ENST00000483117 RANGAP1P46060 587 aaPredicted RBP4.78□□□□□ -1.64
LAPTM4A-202ENST00000483117 ALDH6A1Q02252 535 aaKnown RBP4.78□□□□□ -1.64
LAPTM4A-202ENST00000483117 GRM7Q14831 915 aa4.78□□□□□ -1.64
LAPTM4A-202ENST00000483117 RTN4RL1Q86UN2 441 aaPredicted RBP4.78□□□□□ -1.64
LAPTM4A-202ENST00000483117 LILRB2Q8N423 598 aa4.78□□□□□ -1.64
LAPTM4A-202ENST00000483117 CALML6Q8TD86 181 aa4.78□□□□□ -1.64
LAPTM4A-202ENST00000483117 THAP3Q8WTV1 239 aaPredicted RBP4.78□□□□□ -1.64
LAPTM4A-202ENST00000483117 FOXRED1Q96CU9 486 aaPredicted RBP4.78□□□□□ -1.64
LAPTM4A-202ENST00000483117 PLEKHG4BQ96PX9 1271 aa4.78□□□□□ -1.64
LAPTM4A-202ENST00000483117 SLITRK6Q9H5Y7 841 aa4.78□□□□□ -1.64
LAPTM4A-202ENST00000483117 PTCH2Q9Y6C5 1203 aa4.78□□□□□ -1.64
LAPTM4A-202ENST00000483117 KCNQ2O43526 872 aa4.77□□□□□ -1.65
LAPTM4A-202ENST00000483117 ABHD18Q0P651 414 aa4.77□□□□□ -1.65
LAPTM4A-202ENST00000483117 RIN1Q13671 783 aa4.77□□□□□ -1.65
LAPTM4A-202ENST00000483117 SAFB2Q14151 953 aaKnown RBP eCLIP4.77□□□□□ -1.65
LAPTM4A-202ENST00000483117 C2orf27AQ580R0 203 aa4.77□□□□□ -1.65
LAPTM4A-202ENST00000483117 CRB2Q5IJ48 1285 aa4.77□□□□□ -1.65
LAPTM4A-202ENST00000483117 SGMS1Q86VZ5 419 aa4.77□□□□□ -1.65
LAPTM4A-202ENST00000483117 D2HGDHQ8N465 521 aa4.77□□□□□ -1.65
LAPTM4A-202ENST00000483117 BOCQ9BWV1 1114 aa4.77□□□□□ -1.65
LAPTM4A-202ENST00000483117 NELFAQ9H3P2 528 aa4.77□□□□□ -1.65
LAPTM4A-202ENST00000483117 NCOA5Q9HCD5 579 aaKnown RBP4.77□□□□□ -1.65
LAPTM4A-202ENST00000483117 HECAQ9UBI9 543 aaPredicted RBP4.77□□□□□ -1.65
LAPTM4A-202ENST00000483117 CCDC163A0A0D9SF12 145 aa4.76□□□□□ -1.65
LAPTM4A-202ENST00000483117 CAPN14A8MX76 684 aa4.76□□□□□ -1.65
LAPTM4A-202ENST00000483117 M0R2C6 588 aa4.76□□□□□ -1.65
LAPTM4A-202ENST00000483117 DVL2O14641 736 aa4.76□□□□□ -1.65
LAPTM4A-202ENST00000483117 RAPGEF3O95398 923 aa4.76□□□□□ -1.65
LAPTM4A-202ENST00000483117 NPTXRO95502 500 aa4.76□□□□□ -1.65
LAPTM4A-202ENST00000483117 RGS3P49796 1198 aa4.76□□□□□ -1.65
LAPTM4A-202ENST00000483117 KIF11P52732 1056 aa4.76□□□□□ -1.65
LAPTM4A-202ENST00000483117 ATP2C1P98194 919 aaPredicted RBP4.76□□□□□ -1.65
LAPTM4A-202ENST00000483117 CC2D1AQ6P1N0 951 aaPredicted RBP4.76□□□□□ -1.65
LAPTM4A-202ENST00000483117 OTOP1Q7RTM1 612 aa4.76□□□□□ -1.65
LAPTM4A-202ENST00000483117 CACTINQ8WUQ7 758 aaKnown RBP4.76□□□□□ -1.65
LAPTM4A-202ENST00000483117 MKL1Q969V6 931 aa4.76□□□□□ -1.65
LAPTM4A-202ENST00000483117 MSL2Q9HCI7 577 aa4.76□□□□□ -1.65
LAPTM4A-202ENST00000483117 CTDP1Q9Y5B0 961 aaPredicted RBP4.76□□□□□ -1.65
LAPTM4A-202ENST00000483117 GLRX3O76003 335 aaKnown RBP4.75□□□□□ -1.65
LAPTM4A-202ENST00000483117 MECP2P51608 486 aaKnown RBP4.75□□□□□ -1.65
LAPTM4A-202ENST00000483117 ANTXR2P58335 489 aa4.75□□□□□ -1.65
LAPTM4A-202ENST00000483117 TGFB2P61812 414 aa4.75□□□□□ -1.65
LAPTM4A-202ENST00000483117 SLC6A3Q01959 620 aa4.75□□□□□ -1.65
LAPTM4A-202ENST00000483117 HHEXQ03014 270 aa4.75□□□□□ -1.65
LAPTM4A-202ENST00000483117 MAP3K12Q12852 859 aa4.75□□□□□ -1.65
LAPTM4A-202ENST00000483117 SPTY2D1Q68D10 685 aaPredicted RBP4.75□□□□□ -1.65
LAPTM4A-202ENST00000483117 KLHDC10Q6PID8 442 aa4.75□□□□□ -1.65
LAPTM4A-202ENST00000483117 CLUHP3Q96NS8 147 aa4.75□□□□□ -1.65
LAPTM4A-202ENST00000483117 FOXB1Q99853 325 aa4.75□□□□□ -1.65
LAPTM4A-202ENST00000483117 A0A1W2PRX2 142 aa4.74□□□□□ -1.65
LAPTM4A-202ENST00000483117 PMS2P1A4D2B8 440 aa4.74□□□□□ -1.65
LAPTM4A-202ENST00000483117 C2orf78A6NCI8 922 aa4.74□□□□□ -1.65
LAPTM4A-202ENST00000483117 PLD2O14939 933 aa4.74□□□□□ -1.65
LAPTM4A-202ENST00000483117 MAFO75444 373 aaPredicted RBP4.74□□□□□ -1.65
LAPTM4A-202ENST00000483117 PRLP01236 227 aa4.74□□□□□ -1.65
LAPTM4A-202ENST00000483117 MCM7P33993 719 aa4.74□□□□□ -1.65
LAPTM4A-202ENST00000483117 ADCY7P51828 1080 aa4.74□□□□□ -1.65
LAPTM4A-202ENST00000483117 TUBA3CQ13748 450 aa4.74□□□□□ -1.65
LAPTM4A-202ENST00000483117 FNDC7Q5VTL7 733 aa4.74□□□□□ -1.65
LAPTM4A-202ENST00000483117 ZCCHC8Q6NZY4 707 aaKnown RBP4.74□□□□□ -1.65
LAPTM4A-202ENST00000483117 TUBA3EQ6PEY2 450 aa4.74□□□□□ -1.65
LAPTM4A-202ENST00000483117 ADGRE4PQ86SQ3 457 aa4.74□□□□□ -1.65
LAPTM4A-202ENST00000483117 DDX53Q86TM3 631 aaKnown RBP4.74□□□□□ -1.65
LAPTM4A-202ENST00000483117 CHST14Q8NCH0 376 aa4.74□□□□□ -1.65
LAPTM4A-202ENST00000483117 RABGGTAQ92696 567 aa4.74□□□□□ -1.65
LAPTM4A-202ENST00000483117 RPL10LQ96L21 214 aaKnown RBP4.74□□□□□ -1.65
LAPTM4A-202ENST00000483117 TRIM8Q9BZR9 551 aa4.74□□□□□ -1.65
LAPTM4A-202ENST00000483117 SAMD15Q9P1V8 674 aa4.74□□□□□ -1.65
LAPTM4A-202ENST00000483117 SAE1Q9UBE0 346 aaPredicted RBP4.74□□□□□ -1.65
LAPTM4A-202ENST00000483117 GIT1Q9Y2X7 761 aa4.74□□□□□ -1.65
LAPTM4A-202ENST00000483117 VWA7Q9Y334 891 aa4.74□□□□□ -1.65
LAPTM4A-202ENST00000483117 SH3BP1Q9Y3L3 701 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms