RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 RFC2P35250 354 aa11.21□□□□□ -0.61
SPTLC1-206ENST00000482632 TECP42680 631 aa11.21□□□□□ -0.61
SPTLC1-206ENST00000482632 PSMC5P62195 406 aa11.21□□□□□ -0.61
SPTLC1-206ENST00000482632 CTTNQ14247 550 aaKnown RBP11.21□□□□□ -0.61
SPTLC1-206ENST00000482632 EPHA7Q15375 998 aa11.21□□□□□ -0.61
SPTLC1-206ENST00000482632 TRIM71Q2Q1W2 868 aaKnown RBP11.21□□□□□ -0.61
SPTLC1-206ENST00000482632 ZNF484Q5JVG2 852 aa11.21□□□□□ -0.61
SPTLC1-206ENST00000482632 FOXD4L5Q5VV16 416 aaPredicted RBP11.21□□□□□ -0.61
SPTLC1-206ENST00000482632 TAF2Q6P1X5 1199 aa11.21□□□□□ -0.61
SPTLC1-206ENST00000482632 MTHFD1LQ6UB35 978 aa11.21□□□□□ -0.61
SPTLC1-206ENST00000482632 TPH2Q8IWU9 490 aa11.21□□□□□ -0.61
SPTLC1-206ENST00000482632 FOXD4L4Q8WXT5 416 aaPredicted RBP11.21□□□□□ -0.61
SPTLC1-206ENST00000482632 SCLT1Q96NL6 688 aa11.21□□□□□ -0.61
SPTLC1-206ENST00000482632 SH2D3AQ9BRG2 576 aa11.21□□□□□ -0.61
SPTLC1-206ENST00000482632 LXNQ9BS40 222 aa11.21□□□□□ -0.61
SPTLC1-206ENST00000482632 COL25A1Q9BXS0 654 aaPredicted RBP11.21□□□□□ -0.61
SPTLC1-206ENST00000482632 RGL1Q9NZL6 768 aa11.21□□□□□ -0.61
SPTLC1-206ENST00000482632 CEP131Q9UPN4 1083 aa11.21□□□□□ -0.61
SPTLC1-206ENST00000482632 AKT3Q9Y243 479 aa11.21□□□□□ -0.61
SPTLC1-206ENST00000482632 PCDHB6Q9Y5E3 794 aa11.21□□□□□ -0.61
SPTLC1-206ENST00000482632 MICAL3Q7RTP6 2002 aa11.21□□□□□ -0.62
SPTLC1-206ENST00000482632 P4HBP07237 508 aaKnown RBP11.2□□□□□ -0.62
SPTLC1-206ENST00000482632 PFKMP08237 780 aa11.2□□□□□ -0.62
SPTLC1-206ENST00000482632 IBSPP21815 317 aaPredicted RBP11.2□□□□□ -0.62
SPTLC1-206ENST00000482632 QARSP47897 775 aaKnown RBP11.2□□□□□ -0.62
SPTLC1-206ENST00000482632 KCNJ6P48051 423 aa11.2□□□□□ -0.62
SPTLC1-206ENST00000482632 TRAPPC10P48553 1259 aa11.2□□□□□ -0.62
SPTLC1-206ENST00000482632 CLCN3P51790 818 aa11.2□□□□□ -0.62
SPTLC1-206ENST00000482632 ADAM17P78536 824 aa11.2□□□□□ -0.62
SPTLC1-206ENST00000482632 TBC1D8BQ0IIM8 1120 aa11.2□□□□□ -0.62
SPTLC1-206ENST00000482632 XKR3Q5GH77 459 aa11.2□□□□□ -0.62
SPTLC1-206ENST00000482632 MARCH8Q5T0T0 291 aa11.2□□□□□ -0.62
SPTLC1-206ENST00000482632 PLA2G4FQ68DD2 849 aa11.2□□□□□ -0.62
SPTLC1-206ENST00000482632 C16orf59Q7L2K0 433 aa11.2□□□□□ -0.62
SPTLC1-206ENST00000482632 LRRC71Q8N4P6 559 aa11.2□□□□□ -0.62
SPTLC1-206ENST00000482632 INTS4Q96HW7 963 aaKnown RBP11.2□□□□□ -0.62
SPTLC1-206ENST00000482632 EIF2AK1Q9BQI3 630 aaKnown RBP11.2□□□□□ -0.62
SPTLC1-206ENST00000482632 SUGCTQ9HAC7 445 aa11.2□□□□□ -0.62
SPTLC1-206ENST00000482632 CDY2AQ9Y6F7 541 aa11.2□□□□□ -0.62
SPTLC1-206ENST00000482632 EYSQ5T1H1 3165 aa11.19□□□□□ -0.62
SPTLC1-206ENST00000482632 MBLAC1A4D2B0 266 aaPredicted RBP11.19□□□□□ -0.62
SPTLC1-206ENST00000482632 NBNO60934 754 aa11.19□□□□□ -0.62
SPTLC1-206ENST00000482632 CAND2O75155 1236 aa11.19□□□□□ -0.62
SPTLC1-206ENST00000482632 PARNO95453 639 aaKnown RBP11.19□□□□□ -0.62
SPTLC1-206ENST00000482632 VTNP04004 478 aa11.19□□□□□ -0.62
SPTLC1-206ENST00000482632 GHRP10912 638 aa11.19□□□□□ -0.62
SPTLC1-206ENST00000482632 SYT1P21579 422 aa11.19□□□□□ -0.62
SPTLC1-206ENST00000482632 TMOD1P28289 359 aa11.19□□□□□ -0.62
SPTLC1-206ENST00000482632 TOB1P50616 345 aaPredicted RBP11.19□□□□□ -0.62
SPTLC1-206ENST00000482632 MRPS6P82932 125 aaKnown RBP11.19□□□□□ -0.62
SPTLC1-206ENST00000482632 RBL2Q08999 1139 aa11.19□□□□□ -0.62
SPTLC1-206ENST00000482632 PTGDRQ13258 359 aa11.19□□□□□ -0.62
SPTLC1-206ENST00000482632 ORC2Q13416 577 aaPredicted RBP11.19□□□□□ -0.62
SPTLC1-206ENST00000482632 RILPL1Q5EBL4 403 aa11.19□□□□□ -0.62
SPTLC1-206ENST00000482632 EFCAB12Q6NXP0 572 aa11.19□□□□□ -0.62
SPTLC1-206ENST00000482632 CNKSR3Q6P9H4 555 aa11.19□□□□□ -0.62
SPTLC1-206ENST00000482632 B3GNT9Q6UX72 402 aa11.19□□□□□ -0.62
SPTLC1-206ENST00000482632 BRAPQ7Z569 592 aa11.19□□□□□ -0.62
SPTLC1-206ENST00000482632 ERMNQ8TAM6 284 aa11.19□□□□□ -0.62
SPTLC1-206ENST00000482632 ZNF668Q96K58 619 aaPredicted RBP11.19□□□□□ -0.62
SPTLC1-206ENST00000482632 MTMR9Q96QG7 549 aa11.19□□□□□ -0.62
SPTLC1-206ENST00000482632 MAP7D2Q96T17 732 aa11.19□□□□□ -0.62
SPTLC1-206ENST00000482632 CXXC1Q9P0U4 656 aaPredicted RBP11.19□□□□□ -0.62
SPTLC1-206ENST00000482632 PCDHA2Q9Y5H9 948 aa11.19□□□□□ -0.62
SPTLC1-206ENST00000482632 TRPV2Q9Y5S1 764 aa11.19□□□□□ -0.62
SPTLC1-206ENST00000482632 SLC4A7Q9Y6M7 1214 aa11.19□□□□□ -0.62
SPTLC1-206ENST00000482632 PTPRSQ13332 1948 aa11.19□□□□□ -0.62
SPTLC1-206ENST00000482632 SMIM35A0A1B0GVV1 85 aa11.18□□□□□ -0.62
SPTLC1-206ENST00000482632 MAGEB2O15479 319 aa11.18□□□□□ -0.62
SPTLC1-206ENST00000482632 MAP3K7O43318 606 aa11.18□□□□□ -0.62
SPTLC1-206ENST00000482632 STX6O43752 255 aa11.18□□□□□ -0.62
SPTLC1-206ENST00000482632 C22orf31O95567 290 aa11.18□□□□□ -0.62
SPTLC1-206ENST00000482632 CHRNA1P02708 482 aa11.18□□□□□ -0.62
SPTLC1-206ENST00000482632 POLGP54098 1239 aaPredicted RBP11.18□□□□□ -0.62
SPTLC1-206ENST00000482632 NPEPPSP55786 919 aa11.18□□□□□ -0.62
SPTLC1-206ENST00000482632 SPIRE1Q08AE8 756 aa11.18□□□□□ -0.62
SPTLC1-206ENST00000482632 ZRSR1Q15695 479 aaKnown RBP11.18□□□□□ -0.62
SPTLC1-206ENST00000482632 XKR9Q5GH70 373 aa11.18□□□□□ -0.62
SPTLC1-206ENST00000482632 IER5Q5VY09 327 aa11.18□□□□□ -0.62
SPTLC1-206ENST00000482632 OTUD6AQ7L8S5 288 aa11.18□□□□□ -0.62
SPTLC1-206ENST00000482632 HERVK_113Q902F9 699 aa11.18□□□□□ -0.62
SPTLC1-206ENST00000482632 SEPT8Q92599 483 aa11.18□□□□□ -0.62
SPTLC1-206ENST00000482632 CEP170P1Q96L14 293 aa11.18□□□□□ -0.62
SPTLC1-206ENST00000482632 RAB34Q9BZG1 259 aa11.18□□□□□ -0.62
SPTLC1-206ENST00000482632 ZSWIM4Q9H7M6 989 aa11.18□□□□□ -0.62
SPTLC1-206ENST00000482632 A0A087WWV3 80 aa11.17□□□□□ -0.62
SPTLC1-206ENST00000482632 GRXCR1A8MXD5 290 aa11.17□□□□□ -0.62
SPTLC1-206ENST00000482632 ZBTB42B2RXF5 422 aa11.17□□□□□ -0.62
SPTLC1-206ENST00000482632 RPLP2P05387 115 aaKnown RBP11.17□□□□□ -0.62
SPTLC1-206ENST00000482632 YWHABP31946 246 aaKnown RBP11.17□□□□□ -0.62
SPTLC1-206ENST00000482632 CCT6AP40227 531 aaKnown RBP11.17□□□□□ -0.62
SPTLC1-206ENST00000482632 DNM2P50570 870 aa11.17□□□□□ -0.62
SPTLC1-206ENST00000482632 CEBPZQ03701 1054 aaKnown RBP11.17□□□□□ -0.62
SPTLC1-206ENST00000482632 IKBKEQ14164 716 aa11.17□□□□□ -0.62
SPTLC1-206ENST00000482632 MBTPS1Q14703 1052 aa11.17□□□□□ -0.62
SPTLC1-206ENST00000482632 KIZQ2M2Z5 673 aa11.17□□□□□ -0.62
SPTLC1-206ENST00000482632 FAM117BQ6P1L5 589 aa11.17□□□□□ -0.62
SPTLC1-206ENST00000482632 TRAF7Q6Q0C0 670 aa11.17□□□□□ -0.62
SPTLC1-206ENST00000482632 DTHD1Q6ZMT9 781 aa11.17□□□□□ -0.62
SPTLC1-206ENST00000482632 KRI1Q8N9T8 703 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms