RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 CCDC43Q96MW1 224 aaKnown RBP22.72■■□□□ 1.23
CTSA-206ENST00000480961 NACC1Q96RE7 527 aa22.72■■□□□ 1.23
CTSA-206ENST00000480961 ANKEF1Q9NU02 776 aa22.72■■□□□ 1.23
CTSA-206ENST00000480961 DDX19AQ9NUU7 478 aaKnown RBP22.72■■□□□ 1.23
CTSA-206ENST00000480961 FBXO2Q9UK22 296 aaPredicted RBP22.72■■□□□ 1.23
CTSA-206ENST00000480961 TRPV2Q9Y5S1 764 aa22.72■■□□□ 1.23
CTSA-206ENST00000480961 IGKV6-21A0A0C4DH24 114 aa22.71■■□□□ 1.23
CTSA-206ENST00000480961 CXCL10P02778 98 aa22.71■■□□□ 1.23
CTSA-206ENST00000480961 TMOD1P28289 359 aa22.71■■□□□ 1.23
CTSA-206ENST00000480961 RARRES1P49788 294 aa22.71■■□□□ 1.23
CTSA-206ENST00000480961 DNM1Q05193 864 aaKnown RBP22.71■■□□□ 1.23
CTSA-206ENST00000480961 SLC39A14Q15043 492 aa22.71■■□□□ 1.23
CTSA-206ENST00000480961 STK38Q15208 465 aa22.71■■□□□ 1.23
CTSA-206ENST00000480961 PSRC1Q6PGN9 363 aaPredicted RBP22.71■■□□□ 1.23
CTSA-206ENST00000480961 RNPC3Q96LT9 517 aaKnown RBP22.71■■□□□ 1.23
CTSA-206ENST00000480961 MAP7D2Q96T17 732 aa22.71■■□□□ 1.23
CTSA-206ENST00000480961 CELF4Q9BZC1 486 aaKnown RBP22.71■■□□□ 1.23
CTSA-206ENST00000480961 CSRNP2Q9H175 543 aa22.71■■□□□ 1.23
CTSA-206ENST00000480961 CXXC1Q9P0U4 656 aaPredicted RBP22.71■■□□□ 1.23
CTSA-206ENST00000480961 SUCLA2Q9P2R7 463 aaPredicted RBP22.71■■□□□ 1.23
CTSA-206ENST00000480961 LAMA3Q16787 3333 aa22.7■■□□□ 1.22
CTSA-206ENST00000480961 M0QZ92 97 aa22.7■■□□□ 1.22
CTSA-206ENST00000480961 RFC5P40937 340 aa22.7■■□□□ 1.22
CTSA-206ENST00000480961 NASPP49321 788 aaPredicted RBP22.7■■□□□ 1.22
CTSA-206ENST00000480961 LPIN1Q14693 890 aa22.7■■□□□ 1.22
CTSA-206ENST00000480961 CABP7Q86V35 215 aa22.7■■□□□ 1.22
CTSA-206ENST00000480961 LINC00301Q8NCQ3 95 aa22.7■■□□□ 1.22
CTSA-206ENST00000480961 DBF4BQ8NFT6 615 aa22.7■■□□□ 1.22
CTSA-206ENST00000480961 SLC7A3Q8WY07 619 aa22.7■■□□□ 1.22
CTSA-206ENST00000480961 PNMA5Q96PV4 448 aa22.7■■□□□ 1.22
CTSA-206ENST00000480961 DHX33Q9H6R0 707 aaKnown RBP22.7■■□□□ 1.22
CTSA-206ENST00000480961 SRPRBQ9Y5M8 271 aaKnown RBP22.7■■□□□ 1.22
CTSA-206ENST00000480961 ZBBXA8MT70 800 aa22.69■■□□□ 1.22
CTSA-206ENST00000480961 E9PMD0 336 aa22.69■■□□□ 1.22
CTSA-206ENST00000480961 GPR32O75388 356 aa22.69■■□□□ 1.22
CTSA-206ENST00000480961 PARNO95453 639 aaKnown RBP22.69■■□□□ 1.22
CTSA-206ENST00000480961 XRCC6P12956 609 aaKnown RBP eCLIP22.69■■□□□ 1.22
CTSA-206ENST00000480961 LONP1P36776 959 aaKnown RBP22.69■■□□□ 1.22
CTSA-206ENST00000480961 ANP32AP39687 249 aaKnown RBP22.69■■□□□ 1.22
CTSA-206ENST00000480961 NLRP11P59045 1033 aaKnown RBP22.69■■□□□ 1.22
CTSA-206ENST00000480961 EMC2Q15006 297 aa22.69■■□□□ 1.22
CTSA-206ENST00000480961 FBXO47Q5MNV8 452 aa22.69■■□□□ 1.22
CTSA-206ENST00000480961 USP49Q70CQ1 688 aa22.69■■□□□ 1.22
CTSA-206ENST00000480961 MAEAQ7L5Y9 396 aa22.69■■□□□ 1.22
CTSA-206ENST00000480961 KCNK18Q7Z418 384 aa22.69■■□□□ 1.22
CTSA-206ENST00000480961 KSR1Q8IVT5 923 aa22.69■■□□□ 1.22
CTSA-206ENST00000480961 OSMRQ99650 979 aa22.69■■□□□ 1.22
CTSA-206ENST00000480961 AGO3Q9H9G7 860 aaKnown RBP22.69■■□□□ 1.22
CTSA-206ENST00000480961 STK24Q9Y6E0 443 aa22.69■■□□□ 1.22
CTSA-206ENST00000480961 TRIOBPQ9H2D6 2365 aa22.68■■□□□ 1.22
CTSA-206ENST00000480961 USO1O60763 962 aaKnown RBP22.68■■□□□ 1.22
CTSA-206ENST00000480961 PFKMP08237 780 aa22.68■■□□□ 1.22
CTSA-206ENST00000480961 UBA7P41226 1012 aa22.68■■□□□ 1.22
CTSA-206ENST00000480961 DNM2P50570 870 aa22.68■■□□□ 1.22
CTSA-206ENST00000480961 GRB10Q13322 594 aa22.68■■□□□ 1.22
CTSA-206ENST00000480961 PLEKHG4Q58EX7 1191 aa22.68■■□□□ 1.22
CTSA-206ENST00000480961 HABP4Q5JVS0 413 aaKnown RBP22.68■■□□□ 1.22
CTSA-206ENST00000480961 HERVK_113Q902F9 699 aa22.68■■□□□ 1.22
CTSA-206ENST00000480961 EPSTI1Q96J88 318 aa22.68■■□□□ 1.22
CTSA-206ENST00000480961 AK8Q96MA6 479 aa22.68■■□□□ 1.22
CTSA-206ENST00000480961 ADAMTS10Q9H324 1103 aa22.68■■□□□ 1.22
CTSA-206ENST00000480961 XPNPEP1Q9NQW7 623 aa22.68■■□□□ 1.22
CTSA-206ENST00000480961 DBR1Q9UK59 544 aaKnown RBP22.68■■□□□ 1.22
CTSA-206ENST00000480961 MYH9P35579 1960 aaKnown RBP22.67■■□□□ 1.22
CTSA-206ENST00000480961 ARHGEF35A5YM69 484 aa22.67■■□□□ 1.22
CTSA-206ENST00000480961 SPTLC2O15270 562 aa22.67■■□□□ 1.22
CTSA-206ENST00000480961 RPLP2P05387 115 aaKnown RBP22.67■■□□□ 1.22
CTSA-206ENST00000480961 CD52P31358 61 aa22.67■■□□□ 1.22
CTSA-206ENST00000480961 CNKSR3Q6P9H4 555 aa22.67■■□□□ 1.22
CTSA-206ENST00000480961 RHPN2Q8IUC4 686 aa22.67■■□□□ 1.22
CTSA-206ENST00000480961 KRI1Q8N9T8 703 aaKnown RBP22.67■■□□□ 1.22
CTSA-206ENST00000480961 TMEM40Q8WWA1 233 aa22.67■■□□□ 1.22
CTSA-206ENST00000480961 PRPF31Q8WWY3 499 aaKnown RBP22.67■■□□□ 1.22
CTSA-206ENST00000480961 SEPT8Q92599 483 aa22.67■■□□□ 1.22
CTSA-206ENST00000480961 CDK5RAP3Q96JB5 506 aa22.67■■□□□ 1.22
CTSA-206ENST00000480961 SCLT1Q96NL6 688 aa22.67■■□□□ 1.22
CTSA-206ENST00000480961 JPH2Q9BR39 696 aaPredicted RBP22.67■■□□□ 1.22
CTSA-206ENST00000480961 BHMT2Q9H2M3 363 aa22.67■■□□□ 1.22
CTSA-206ENST00000480961 POLD4Q9HCU8 107 aa22.67■■□□□ 1.22
CTSA-206ENST00000480961 DNM3Q9UQ16 869 aa22.67■■□□□ 1.22
CTSA-206ENST00000480961 NOC2LQ9Y3T9 749 aaKnown RBP22.67■■□□□ 1.22
CTSA-206ENST00000480961 PPME1Q9Y570 386 aa22.67■■□□□ 1.22
CTSA-206ENST00000480961 CSDE1O75534 798 aaKnown RBP22.66■■□□□ 1.22
CTSA-206ENST00000480961 ACTN1P12814 892 aa22.66■■□□□ 1.22
CTSA-206ENST00000480961 NCLP19338 710 aaKnown RBP22.66■■□□□ 1.22
CTSA-206ENST00000480961 MUTP22033 750 aa22.66■■□□□ 1.22
CTSA-206ENST00000480961 DDIT3P35638 169 aa22.66■■□□□ 1.22
CTSA-206ENST00000480961 GPC3P51654 580 aa22.66■■□□□ 1.22
CTSA-206ENST00000480961 CRYBB1P53674 252 aaPredicted RBP22.66■■□□□ 1.22
CTSA-206ENST00000480961 KARSQ15046 597 aaKnown RBP22.66■■□□□ 1.22
CTSA-206ENST00000480961 FAM109BQ6ICB4 259 aaPredicted RBP22.66■■□□□ 1.22
CTSA-206ENST00000480961 PADI6Q6TGC4 694 aa22.66■■□□□ 1.22
CTSA-206ENST00000480961 NLRP7Q8WX94 980 aa22.66■■□□□ 1.22
CTSA-206ENST00000480961 MTRQ99707 1265 aa22.66■■□□□ 1.22
CTSA-206ENST00000480961 IFIH1Q9BYX4 1025 aaKnown RBP22.66■■□□□ 1.22
CTSA-206ENST00000480961 ATP6V0A4Q9HBG4 840 aa22.66■■□□□ 1.22
CTSA-206ENST00000480961 GPRC5CQ9NQ84 441 aa22.66■■□□□ 1.22
CTSA-206ENST00000480961 SCN5AQ14524 2016 aa22.65■■□□□ 1.22
CTSA-206ENST00000480961 KAT6AQ92794 2004 aa22.65■■□□□ 1.22
CTSA-206ENST00000480961 KDM3AQ9Y4C1 1321 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms