RNA–Protein interactions for RNA: ENST00000480382.1

CCM2-212, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-212ENST00000480382 PIGOQ8TEQ8 1089 aa13.49□□□□□ -0.25
CCM2-212ENST00000480382 MAP7D2Q96T17 732 aa13.49□□□□□ -0.25
CCM2-212ENST00000480382 POLR3CQ9BUI4 534 aaPredicted RBP13.49□□□□□ -0.25
CCM2-212ENST00000480382 IFIH1Q9BYX4 1025 aaKnown RBP13.49□□□□□ -0.25
CCM2-212ENST00000480382 CELF4Q9BZC1 486 aaKnown RBP13.49□□□□□ -0.25
CCM2-212ENST00000480382 RAB34Q9BZG1 259 aa13.49□□□□□ -0.25
CCM2-212ENST00000480382 GINS2Q9Y248 185 aa13.49□□□□□ -0.25
CCM2-212ENST00000480382 CLIC4Q9Y696 253 aa13.49□□□□□ -0.25
CCM2-212ENST00000480382 KDM3AQ9Y4C1 1321 aa13.48□□□□□ -0.25
CCM2-212ENST00000480382 IGKV6-21A0A0C4DH24 114 aa13.48□□□□□ -0.25
CCM2-212ENST00000480382 MAFO75444 373 aaPredicted RBP13.48□□□□□ -0.25
CCM2-212ENST00000480382 BAIAP3O94812 1187 aa13.48□□□□□ -0.25
CCM2-212ENST00000480382 RPA1P27694 616 aa13.48□□□□□ -0.25
CCM2-212ENST00000480382 CDC25AP30304 524 aa13.48□□□□□ -0.25
CCM2-212ENST00000480382 CCT6AP40227 531 aaKnown RBP13.48□□□□□ -0.25
CCM2-212ENST00000480382 RFC5P40937 340 aa13.48□□□□□ -0.25
CCM2-212ENST00000480382 POLGP54098 1239 aaPredicted RBP13.48□□□□□ -0.25
CCM2-212ENST00000480382 MKRN4PQ13434 485 aaPredicted RBP13.48□□□□□ -0.25
CCM2-212ENST00000480382 BECN1Q14457 450 aa13.48□□□□□ -0.25
CCM2-212ENST00000480382 ECM1Q16610 540 aa13.48□□□□□ -0.25
CCM2-212ENST00000480382 KIZQ2M2Z5 673 aa13.48□□□□□ -0.25
CCM2-212ENST00000480382 TSHZ1Q6ZSZ6 1077 aa13.48□□□□□ -0.25
CCM2-212ENST00000480382 SLC7A3Q8WY07 619 aa13.48□□□□□ -0.25
CCM2-212ENST00000480382 SEPT8Q92599 483 aa13.48□□□□□ -0.25
CCM2-212ENST00000480382 ZNF668Q96K58 619 aaPredicted RBP13.48□□□□□ -0.25
CCM2-212ENST00000480382 CCDC43Q96MW1 224 aaKnown RBP13.48□□□□□ -0.25
CCM2-212ENST00000480382 OSMRQ99650 979 aa13.48□□□□□ -0.25
CCM2-212ENST00000480382 ZSCAN16Q9H4T2 348 aaPredicted RBP13.48□□□□□ -0.25
CCM2-212ENST00000480382 CDHR5Q9HBB8 845 aa13.48□□□□□ -0.25
CCM2-212ENST00000480382 PPME1Q9Y570 386 aa13.48□□□□□ -0.25
CCM2-212ENST00000480382 SLC4A7Q9Y6M7 1214 aa13.48□□□□□ -0.25
CCM2-212ENST00000480382 GRXCR1A8MXD5 290 aa13.47□□□□□ -0.25
CCM2-212ENST00000480382 GPR32O75388 356 aa13.47□□□□□ -0.25
CCM2-212ENST00000480382 BMP15O95972 392 aa13.47□□□□□ -0.25
CCM2-212ENST00000480382 ZSCAN22P10073 491 aaPredicted RBP13.47□□□□□ -0.25
CCM2-212ENST00000480382 CD52P31358 61 aa13.47□□□□□ -0.25
CCM2-212ENST00000480382 KCNJ6P48051 423 aa13.47□□□□□ -0.25
CCM2-212ENST00000480382 RARRES1P49788 294 aa13.47□□□□□ -0.25
CCM2-212ENST00000480382 WDR5P61964 334 aaKnown RBP13.47□□□□□ -0.25
CCM2-212ENST00000480382 DEFB103AP81534 67 aa13.47□□□□□ -0.25
CCM2-212ENST00000480382 CEBPZQ03701 1054 aaKnown RBP13.47□□□□□ -0.25
CCM2-212ENST00000480382 IKBKEQ14164 716 aa13.47□□□□□ -0.25
CCM2-212ENST00000480382 PDIA5Q14554 519 aa13.47□□□□□ -0.25
CCM2-212ENST00000480382 EMC2Q15006 297 aa13.47□□□□□ -0.25
CCM2-212ENST00000480382 ARL6IP4Q66PJ3 421 aaKnown RBP13.47□□□□□ -0.25
CCM2-212ENST00000480382 TMEM40Q8WWA1 233 aa13.47□□□□□ -0.25
CCM2-212ENST00000480382 USP28Q96RU2 1077 aa13.47□□□□□ -0.25
CCM2-212ENST00000480382 JPH2Q9BR39 696 aaPredicted RBP13.47□□□□□ -0.25
CCM2-212ENST00000480382 MMTAG2Q9BU76 263 aaKnown RBP13.47□□□□□ -0.25
CCM2-212ENST00000480382 DHX33Q9H6R0 707 aaKnown RBP13.47□□□□□ -0.25
CCM2-212ENST00000480382 AGO3Q9H9G7 860 aaKnown RBP13.47□□□□□ -0.25
CCM2-212ENST00000480382 ANKEF1Q9NU02 776 aa13.47□□□□□ -0.25
CCM2-212ENST00000480382 CHD9Q3L8U1 2897 aa13.47□□□□□ -0.25
CCM2-212ENST00000480382 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.46□□□□□ -0.25
CCM2-212ENST00000480382 ABHD14A-ACY1A0A1B0GW23 586 aa13.46□□□□□ -0.25
CCM2-212ENST00000480382 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.46□□□□□ -0.25
CCM2-212ENST00000480382 USO1O60763 962 aaKnown RBP13.46□□□□□ -0.25
CCM2-212ENST00000480382 F13A1P00488 732 aa13.46□□□□□ -0.25
CCM2-212ENST00000480382 ATP2A2P16615 1042 aaKnown RBP13.46□□□□□ -0.25
CCM2-212ENST00000480382 GPC3P51654 580 aa13.46□□□□□ -0.25
CCM2-212ENST00000480382 CRYBB1P53674 252 aaPredicted RBP13.46□□□□□ -0.25
CCM2-212ENST00000480382 NLRP11P59045 1033 aaKnown RBP13.46□□□□□ -0.25
CCM2-212ENST00000480382 SMAD3P84022 425 aaKnown RBP13.46□□□□□ -0.25
CCM2-212ENST00000480382 GRIN1Q05586 938 aa13.46□□□□□ -0.25
CCM2-212ENST00000480382 PAK2Q13177 524 aa13.46□□□□□ -0.25
CCM2-212ENST00000480382 PTPAQ15257 358 aa13.46□□□□□ -0.25
CCM2-212ENST00000480382 KRT79Q5XKE5 535 aa13.46□□□□□ -0.25
CCM2-212ENST00000480382 TMCO2Q7Z6W1 182 aaPredicted RBP13.46□□□□□ -0.25
CCM2-212ENST00000480382 NLRP7Q8WX94 980 aa13.46□□□□□ -0.25
CCM2-212ENST00000480382 APBB2Q92870 758 aa13.46□□□□□ -0.25
CCM2-212ENST00000480382 TMEM143Q96AN5 459 aa13.46□□□□□ -0.25
CCM2-212ENST00000480382 SCLT1Q96NL6 688 aa13.46□□□□□ -0.25
CCM2-212ENST00000480382 NACC1Q96RE7 527 aa13.46□□□□□ -0.25
CCM2-212ENST00000480382 SLC9A7Q96T83 725 aa13.46□□□□□ -0.25
CCM2-212ENST00000480382 MTRQ99707 1265 aa13.46□□□□□ -0.25
CCM2-212ENST00000480382 ADAMTS10Q9H324 1103 aa13.46□□□□□ -0.25
CCM2-212ENST00000480382 XPNPEP1Q9NQW7 623 aa13.46□□□□□ -0.25
CCM2-212ENST00000480382 DDX19AQ9NUU7 478 aaKnown RBP13.46□□□□□ -0.25
CCM2-212ENST00000480382 SUCLA2Q9P2R7 463 aaPredicted RBP13.46□□□□□ -0.25
CCM2-212ENST00000480382 NOC2LQ9Y3T9 749 aaKnown RBP13.46□□□□□ -0.25
CCM2-212ENST00000480382 STK24Q9Y6E0 443 aa13.46□□□□□ -0.25
CCM2-212ENST00000480382 CDH23Q9H251 3354 aa13.45□□□□□ -0.26
CCM2-212ENST00000480382 MUTP22033 750 aa13.45□□□□□ -0.26
CCM2-212ENST00000480382 MARCKSP29966 332 aaPredicted RBP13.45□□□□□ -0.26
CCM2-212ENST00000480382 PBX2P40425 430 aa13.45□□□□□ -0.26
CCM2-212ENST00000480382 DNM2P50570 870 aa13.45□□□□□ -0.26
CCM2-212ENST00000480382 RABGGTBP53611 331 aa13.45□□□□□ -0.26
CCM2-212ENST00000480382 ZRSR1Q15695 479 aaKnown RBP13.45□□□□□ -0.26
CCM2-212ENST00000480382 FOXD4L6Q3SYB3 417 aaPredicted RBP13.45□□□□□ -0.26
CCM2-212ENST00000480382 FOXD4L3Q6VB84 417 aaPredicted RBP13.45□□□□□ -0.26
CCM2-212ENST00000480382 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.45□□□□□ -0.26
CCM2-212ENST00000480382 FAM228AQ86W67 206 aa13.45□□□□□ -0.26
CCM2-212ENST00000480382 RHPN2Q8IUC4 686 aa13.45□□□□□ -0.26
CCM2-212ENST00000480382 EXOC8Q8IYI6 725 aa13.45□□□□□ -0.26
CCM2-212ENST00000480382 USP38Q8NB14 1042 aa13.45□□□□□ -0.26
CCM2-212ENST00000480382 ATP6V0A4Q9HBG4 840 aa13.45□□□□□ -0.26
CCM2-212ENST00000480382 DBR1Q9UK59 544 aaKnown RBP13.45□□□□□ -0.26
CCM2-212ENST00000480382 PADI3Q9ULW8 664 aa13.45□□□□□ -0.26
CCM2-212ENST00000480382 KIAA1024Q9UPX6 916 aa13.45□□□□□ -0.26
CCM2-212ENST00000480382 SQORQ9Y6N5 450 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms