RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 PPME1Q9Y570 386 aa19.48■□□□□ 0.71
UPF3A-206ENST00000480362 ARID2Q68CP9 1835 aa19.48■□□□□ 0.71
UPF3A-206ENST00000480362 SYNRGQ9UMZ2 1314 aa19.48■□□□□ 0.71
UPF3A-206ENST00000480362 FSD2A1L4K1 749 aa19.47■□□□□ 0.71
UPF3A-206ENST00000480362 MYADML2A6NDP7 307 aa19.47■□□□□ 0.71
UPF3A-206ENST00000480362 PGK1P00558 417 aa19.47■□□□□ 0.71
UPF3A-206ENST00000480362 PRCPP42785 496 aa19.47■□□□□ 0.71
UPF3A-206ENST00000480362 ZNF131P52739 623 aa19.47■□□□□ 0.71
UPF3A-206ENST00000480362 POLGP54098 1239 aaPredicted RBP19.47■□□□□ 0.71
UPF3A-206ENST00000480362 FAM102BQ5T8I3 360 aa19.47■□□□□ 0.71
UPF3A-206ENST00000480362 KIAA0895Q8NCT3 520 aa19.47■□□□□ 0.71
UPF3A-206ENST00000480362 MCPH1Q8NEM0 835 aa19.47■□□□□ 0.71
UPF3A-206ENST00000480362 FAM200AQ8TCP9 573 aa19.47■□□□□ 0.71
UPF3A-206ENST00000480362 DHX33Q9H6R0 707 aaKnown RBP19.47■□□□□ 0.71
UPF3A-206ENST00000480362 ATP6V0A4Q9HBG4 840 aa19.47■□□□□ 0.71
UPF3A-206ENST00000480362 PARVGQ9HBI0 331 aa19.47■□□□□ 0.71
UPF3A-206ENST00000480362 HMX1Q9NP08 348 aaPredicted RBP19.47■□□□□ 0.71
UPF3A-206ENST00000480362 GPRC5CQ9NQ84 441 aa19.47■□□□□ 0.71
UPF3A-206ENST00000480362 XPNPEP3Q9NQH7 507 aa19.47■□□□□ 0.71
UPF3A-206ENST00000480362 XPNPEP1Q9NQW7 623 aa19.47■□□□□ 0.71
UPF3A-206ENST00000480362 DDX20Q9UHI6 824 aaKnown RBP19.47■□□□□ 0.71
UPF3A-206ENST00000480362 MAPK8IP1Q9UQF2 711 aa19.47■□□□□ 0.71
UPF3A-206ENST00000480362 PCDHA2Q9Y5H9 948 aa19.47■□□□□ 0.71
UPF3A-206ENST00000480362 ZBTB42B2RXF5 422 aa19.46■□□□□ 0.71
UPF3A-206ENST00000480362 KPNA6O60684 536 aa19.46■□□□□ 0.71
UPF3A-206ENST00000480362 INSRRP14616 1297 aa19.46■□□□□ 0.71
UPF3A-206ENST00000480362 RFC5P40937 340 aa19.46■□□□□ 0.71
UPF3A-206ENST00000480362 NKX3-2P78367 333 aa19.46■□□□□ 0.71
UPF3A-206ENST00000480362 EMC2Q15006 297 aa19.46■□□□□ 0.71
UPF3A-206ENST00000480362 CT47A1Q5JQC4 288 aaPredicted RBP19.46■□□□□ 0.71
UPF3A-206ENST00000480362 ZNF484Q5JVG2 852 aa19.46■□□□□ 0.71
UPF3A-206ENST00000480362 GNASQ5JWF2 1037 aa19.46■□□□□ 0.71
UPF3A-206ENST00000480362 ADSSL1Q8N142 457 aa19.46■□□□□ 0.71
UPF3A-206ENST00000480362 SH3TC2Q8TF17 1288 aa19.46■□□□□ 0.71
UPF3A-206ENST00000480362 KAT2BQ92831 832 aa19.46■□□□□ 0.71
UPF3A-206ENST00000480362 DRC1Q96MC2 740 aa19.46■□□□□ 0.71
UPF3A-206ENST00000480362 BPIFA3Q9BQP9 254 aa19.46■□□□□ 0.71
UPF3A-206ENST00000480362 SEL1LQ9UBV2 794 aa19.46■□□□□ 0.71
UPF3A-206ENST00000480362 ADAMTS4O75173 837 aa19.45■□□□□ 0.7
UPF3A-206ENST00000480362 MAFO75444 373 aaPredicted RBP19.45■□□□□ 0.7
UPF3A-206ENST00000480362 HSPA8P11142 646 aaKnown RBP19.45■□□□□ 0.7
UPF3A-206ENST00000480362 SOX10P56693 466 aa19.45■□□□□ 0.7
UPF3A-206ENST00000480362 TBC1D8BQ0IIM8 1120 aa19.45■□□□□ 0.7
UPF3A-206ENST00000480362 STIM1Q13586 685 aa19.45■□□□□ 0.7
UPF3A-206ENST00000480362 IQCB1Q15051 598 aa19.45■□□□□ 0.7
UPF3A-206ENST00000480362 LRRC41Q15345 812 aa19.45■□□□□ 0.7
UPF3A-206ENST00000480362 ODR4Q5SWX8 454 aa19.45■□□□□ 0.7
UPF3A-206ENST00000480362 KLHL10Q6JEL2 608 aa19.45■□□□□ 0.7
UPF3A-206ENST00000480362 GLIS3Q8NEA6 775 aa19.45■□□□□ 0.7
UPF3A-206ENST00000480362 TRAPPC12Q8WVT3 735 aa19.45■□□□□ 0.7
UPF3A-206ENST00000480362 SLC7A3Q8WY07 619 aa19.45■□□□□ 0.7
UPF3A-206ENST00000480362 FGFBP2Q9BYJ0 223 aa19.45■□□□□ 0.7
UPF3A-206ENST00000480362 ZEB2O60315 1214 aa19.44■□□□□ 0.7
UPF3A-206ENST00000480362 F2P00734 622 aa19.44■□□□□ 0.7
UPF3A-206ENST00000480362 PLS3P13797 630 aa19.44■□□□□ 0.7
UPF3A-206ENST00000480362 ERCC5P28715 1186 aaPredicted RBP19.44■□□□□ 0.7
UPF3A-206ENST00000480362 PSEN2P49810 448 aa19.44■□□□□ 0.7
UPF3A-206ENST00000480362 CHMP4BP1P59074 171 aa19.44■□□□□ 0.7
UPF3A-206ENST00000480362 IGBP1P78318 339 aa19.44■□□□□ 0.7
UPF3A-206ENST00000480362 PURAQ00577 322 aaKnown RBP19.44■□□□□ 0.7
UPF3A-206ENST00000480362 MFSD10Q14728 455 aa19.44■□□□□ 0.7
UPF3A-206ENST00000480362 COBLL1Q53SF7 1204 aa19.44■□□□□ 0.7
UPF3A-206ENST00000480362 LUZP1Q86V48 1076 aa19.44■□□□□ 0.7
UPF3A-206ENST00000480362 EXOC8Q8IYI6 725 aa19.44■□□□□ 0.7
UPF3A-206ENST00000480362 AOPEPQ8N6M6 819 aa19.44■□□□□ 0.7
UPF3A-206ENST00000480362 KIFAP3Q92845 792 aa19.44■□□□□ 0.7
UPF3A-206ENST00000480362 TMEM143Q96AN5 459 aa19.44■□□□□ 0.7
UPF3A-206ENST00000480362 MRPL44Q9H9J2 332 aaKnown RBP19.44■□□□□ 0.7
UPF3A-206ENST00000480362 OLFML3Q9NRN5 406 aa19.44■□□□□ 0.7
UPF3A-206ENST00000480362 LARSQ9P2J5 1176 aaKnown RBP19.44■□□□□ 0.7
UPF3A-206ENST00000480362 COL1A2P08123 1366 aa19.44■□□□□ 0.7
UPF3A-206ENST00000480362 HAS3O00219 553 aa19.43■□□□□ 0.7
UPF3A-206ENST00000480362 MSCO60682 206 aa19.43■□□□□ 0.7
UPF3A-206ENST00000480362 NMT1P30419 496 aaKnown RBP19.43■□□□□ 0.7
UPF3A-206ENST00000480362 PPP1R2P41236 205 aa19.43■□□□□ 0.7
UPF3A-206ENST00000480362 PPFIA1Q13136 1202 aa19.43■□□□□ 0.7
UPF3A-206ENST00000480362 KIAA0753Q2KHM9 967 aa19.43■□□□□ 0.7
UPF3A-206ENST00000480362 L1TD1Q5T7N2 865 aaKnown RBP19.43■□□□□ 0.7
UPF3A-206ENST00000480362 DHX40Q8IX18 779 aaKnown RBP19.43■□□□□ 0.7
UPF3A-206ENST00000480362 FAM178BQ8IXR5 827 aa19.43■□□□□ 0.7
UPF3A-206ENST00000480362 MYOCDQ8IZQ8 938 aa19.43■□□□□ 0.7
UPF3A-206ENST00000480362 GUF1Q8N442 669 aaKnown RBP19.43■□□□□ 0.7
UPF3A-206ENST00000480362 KLHDC9Q8NEP7 349 aa19.43■□□□□ 0.7
UPF3A-206ENST00000480362 NELFBQ8WX92 580 aa19.43■□□□□ 0.7
UPF3A-206ENST00000480362 DHTKD1Q96HY7 919 aaPredicted RBP19.43■□□□□ 0.7
UPF3A-206ENST00000480362 POLR3FQ9H1D9 316 aaPredicted RBP19.43■□□□□ 0.7
UPF3A-206ENST00000480362 CTNND2Q9UQB3 1225 aa19.43■□□□□ 0.7
UPF3A-206ENST00000480362 IGKV6-21A0A0C4DH24 114 aa19.42■□□□□ 0.7
UPF3A-206ENST00000480362 SMTNL1A8MU46 457 aa19.42■□□□□ 0.7
UPF3A-206ENST00000480362 BECN2A8MW95 431 aa19.42■□□□□ 0.7
UPF3A-206ENST00000480362 MYCNP04198 464 aaPredicted RBP19.42■□□□□ 0.7
UPF3A-206ENST00000480362 KLRC1P26715 233 aa19.42■□□□□ 0.7
UPF3A-206ENST00000480362 ARL2P36404 184 aa19.42■□□□□ 0.7
UPF3A-206ENST00000480362 PEX3P56589 373 aa19.42■□□□□ 0.7
UPF3A-206ENST00000480362 STX17P56962 302 aa19.42■□□□□ 0.7
UPF3A-206ENST00000480362 ZNF720Q7Z2F6 126 aa19.42■□□□□ 0.7
UPF3A-206ENST00000480362 MED15Q96RN5 788 aa19.42■□□□□ 0.7
UPF3A-206ENST00000480362 FIZ1Q96SL8 496 aa19.42■□□□□ 0.7
UPF3A-206ENST00000480362 JPH2Q9BR39 696 aaPredicted RBP19.42■□□□□ 0.7
UPF3A-206ENST00000480362 MTG1Q9BT17 334 aaPredicted RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms