RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 RESP18Q5W5W9 173 aa9.19□□□□□ -0.94
USP54-212ENST00000480210 EFCAB12Q6NXP0 572 aa9.19□□□□□ -0.94
USP54-212ENST00000480210 FOXD4L3Q6VB84 417 aaPredicted RBP9.19□□□□□ -0.94
USP54-212ENST00000480210 SYT2Q8N9I0 419 aaPredicted RBP9.19□□□□□ -0.94
USP54-212ENST00000480210 IQUBQ8NA54 791 aa9.19□□□□□ -0.94
USP54-212ENST00000480210 USP38Q8NB14 1042 aa9.19□□□□□ -0.94
USP54-212ENST00000480210 SYMPKQ92797 1274 aaKnown RBP9.19□□□□□ -0.94
USP54-212ENST00000480210 CLIC6Q96NY7 704 aa9.19□□□□□ -0.94
USP54-212ENST00000480210 CEP89Q96ST8 783 aa9.19□□□□□ -0.94
USP54-212ENST00000480210 MTRQ99707 1265 aa9.19□□□□□ -0.94
USP54-212ENST00000480210 INO80BQ9C086 356 aaPredicted RBP9.19□□□□□ -0.94
USP54-212ENST00000480210 C17orf75Q9HAS0 396 aa9.19□□□□□ -0.94
USP54-212ENST00000480210 ATP6V0A4Q9HBG4 840 aa9.19□□□□□ -0.94
USP54-212ENST00000480210 BMP2KQ9NSY1 1161 aaPredicted RBP9.19□□□□□ -0.94
USP54-212ENST00000480210 ZBTB42B2RXF5 422 aa9.18□□□□□ -0.94
USP54-212ENST00000480210 C22orf31O95567 290 aa9.18□□□□□ -0.94
USP54-212ENST00000480210 TIMP1P01033 207 aa9.18□□□□□ -0.94
USP54-212ENST00000480210 PFKMP08237 780 aa9.18□□□□□ -0.94
USP54-212ENST00000480210 RAG1P15918 1043 aa9.18□□□□□ -0.94
USP54-212ENST00000480210 CYP11B2P19099 503 aa9.18□□□□□ -0.94
USP54-212ENST00000480210 SCP2P22307 547 aa9.18□□□□□ -0.94
USP54-212ENST00000480210 CDC25AP30304 524 aa9.18□□□□□ -0.94
USP54-212ENST00000480210 ABCD1P33897 745 aa9.18□□□□□ -0.94
USP54-212ENST00000480210 IGBP1P78318 339 aa9.18□□□□□ -0.94
USP54-212ENST00000480210 MLLT1Q03111 559 aaPredicted RBP9.18□□□□□ -0.94
USP54-212ENST00000480210 GRIN1Q05586 938 aa9.18□□□□□ -0.94
USP54-212ENST00000480210 GRB10Q13322 594 aa9.18□□□□□ -0.94
USP54-212ENST00000480210 MXD4Q14582 209 aaPredicted RBP9.18□□□□□ -0.94
USP54-212ENST00000480210 PCBP1Q15365 356 aaKnown RBP eCLIP9.18□□□□□ -0.94
USP54-212ENST00000480210 FAM26DQ5JW98 314 aa9.18□□□□□ -0.94
USP54-212ENST00000480210 KANK3Q6NY19 840 aa9.18□□□□□ -0.94
USP54-212ENST00000480210 PHLPP2Q6ZVD8 1323 aa9.18□□□□□ -0.94
USP54-212ENST00000480210 SV2BQ7L1I2 683 aa9.18□□□□□ -0.94
USP54-212ENST00000480210 RPUSD2Q8IZ73 545 aaKnown RBP9.18□□□□□ -0.94
USP54-212ENST00000480210 TMEM199Q8N511 208 aa9.18□□□□□ -0.94
USP54-212ENST00000480210 TMEM87AQ8NBN3 555 aa9.18□□□□□ -0.94
USP54-212ENST00000480210 EPSTI1Q96J88 318 aa9.18□□□□□ -0.94
USP54-212ENST00000480210 PNMA5Q96PV4 448 aa9.18□□□□□ -0.94
USP54-212ENST00000480210 PDLIM7Q9NR12 457 aa9.18□□□□□ -0.94
USP54-212ENST00000480210 TRMT13Q9NUP7 481 aaKnown RBP9.18□□□□□ -0.94
USP54-212ENST00000480210 WRAP73Q9P2S5 460 aaPredicted RBP9.18□□□□□ -0.94
USP54-212ENST00000480210 TBX21Q9UL17 535 aa9.18□□□□□ -0.94
USP54-212ENST00000480210 PP2D1A8MPX8 630 aa9.17□□□□□ -0.94
USP54-212ENST00000480210 MYL1P05976 194 aa9.17□□□□□ -0.94
USP54-212ENST00000480210 PLA2G4BP0C869 781 aa9.17□□□□□ -0.94
USP54-212ENST00000480210 SELPP16109 830 aa9.17□□□□□ -0.94
USP54-212ENST00000480210 GUCY2CP25092 1073 aa9.17□□□□□ -0.94
USP54-212ENST00000480210 STAT6P42226 847 aa9.17□□□□□ -0.94
USP54-212ENST00000480210 NPEPPSP55786 919 aa9.17□□□□□ -0.94
USP54-212ENST00000480210 TFDP1Q14186 410 aa9.17□□□□□ -0.94
USP54-212ENST00000480210 KARSQ15046 597 aaKnown RBP9.17□□□□□ -0.94
USP54-212ENST00000480210 PPP2R5AQ15172 486 aa9.17□□□□□ -0.94
USP54-212ENST00000480210 ZRSR1Q15695 479 aaKnown RBP9.17□□□□□ -0.94
USP54-212ENST00000480210 ECM1Q16610 540 aa9.17□□□□□ -0.94
USP54-212ENST00000480210 POTEGQ6S5H5 508 aa9.17□□□□□ -0.94
USP54-212ENST00000480210 SHC4Q6S5L8 630 aa9.17□□□□□ -0.94
USP54-212ENST00000480210 PADI6Q6TGC4 694 aa9.17□□□□□ -0.94
USP54-212ENST00000480210 TRMT1LQ7Z2T5 733 aaKnown RBP9.17□□□□□ -0.94
USP54-212ENST00000480210 ZNF410Q86VK4 478 aa9.17□□□□□ -0.94
USP54-212ENST00000480210 KIAA0319LQ8IZA0 1049 aa9.17□□□□□ -0.94
USP54-212ENST00000480210 METTL13Q8N6R0 699 aa9.17□□□□□ -0.94
USP54-212ENST00000480210 LINC01465Q8N7H1 131 aa9.17□□□□□ -0.94
USP54-212ENST00000480210 SLC17A8Q8NDX2 589 aa9.17□□□□□ -0.94
USP54-212ENST00000480210 PIGOQ8TEQ8 1089 aa9.17□□□□□ -0.94
USP54-212ENST00000480210 PSPC1Q8WXF1 523 aaKnown RBP9.17□□□□□ -0.94
USP54-212ENST00000480210 MRPS27Q92552 414 aaKnown RBP9.17□□□□□ -0.94
USP54-212ENST00000480210 LARP4BQ92615 738 aaKnown RBP9.17□□□□□ -0.94
USP54-212ENST00000480210 RAD54LQ92698 747 aa9.17□□□□□ -0.94
USP54-212ENST00000480210 KIFAP3Q92845 792 aa9.17□□□□□ -0.94
USP54-212ENST00000480210 DRC1Q96MC2 740 aa9.17□□□□□ -0.94
USP54-212ENST00000480210 NOC4LQ9BVI4 516 aaKnown RBP9.17□□□□□ -0.94
USP54-212ENST00000480210 TRPV6Q9H1D0 765 aa9.17□□□□□ -0.94
USP54-212ENST00000480210 BHMT2Q9H2M3 363 aa9.17□□□□□ -0.94
USP54-212ENST00000480210 TNMDQ9H2S6 317 aa9.17□□□□□ -0.94
USP54-212ENST00000480210 HIPK3Q9H422 1215 aa9.17□□□□□ -0.94
USP54-212ENST00000480210 SUGCTQ9HAC7 445 aa9.17□□□□□ -0.94
USP54-212ENST00000480210 KCNH3Q9ULD8 1083 aa9.17□□□□□ -0.94
USP54-212ENST00000480210 ODF2LQ9ULJ1 636 aa9.17□□□□□ -0.94
USP54-212ENST00000480210 TANC1Q9C0D5 1861 aa9.17□□□□□ -0.94
USP54-212ENST00000480210 PDE4DIPQ5VU43 2346 aa9.16□□□□□ -0.94
USP54-212ENST00000480210 RSPH10B2B2RC85 870 aa9.16□□□□□ -0.94
USP54-212ENST00000480210 E9PMD0 336 aa9.16□□□□□ -0.94
USP54-212ENST00000480210 H0YCG3 227 aa9.16□□□□□ -0.94
USP54-212ENST00000480210 IQCF3P0C7M6 154 aa9.16□□□□□ -0.94
USP54-212ENST00000480210 RSPH10BP0C881 870 aa9.16□□□□□ -0.94
USP54-212ENST00000480210 CKBP12277 381 aa9.16□□□□□ -0.94
USP54-212ENST00000480210 PLCG1P19174 1290 aa9.16□□□□□ -0.94
USP54-212ENST00000480210 THPOP40225 353 aa9.16□□□□□ -0.94
USP54-212ENST00000480210 SYKP43405 635 aa9.16□□□□□ -0.94
USP54-212ENST00000480210 MRE11P49959 708 aa9.16□□□□□ -0.94
USP54-212ENST00000480210 CRYBB1P53674 252 aaPredicted RBP9.16□□□□□ -0.94
USP54-212ENST00000480210 SLC12A3P55017 1021 aa9.16□□□□□ -0.94
USP54-212ENST00000480210 UBE2HP62256 183 aa9.16□□□□□ -0.94
USP54-212ENST00000480210 MRPS6P82932 125 aaKnown RBP9.16□□□□□ -0.94
USP54-212ENST00000480210 ZNF200P98182 395 aaPredicted RBP9.16□□□□□ -0.94
USP54-212ENST00000480210 PPIGQ13427 754 aaKnown RBP eCLIP9.16□□□□□ -0.94
USP54-212ENST00000480210 EMC2Q15006 297 aa9.16□□□□□ -0.94
USP54-212ENST00000480210 TRIM71Q2Q1W2 868 aaKnown RBP9.16□□□□□ -0.94
USP54-212ENST00000480210 SPECC1Q5M775 1068 aa9.16□□□□□ -0.94
USP54-212ENST00000480210 PLA2G4FQ68DD2 849 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms