RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 POLGP54098 1239 aaPredicted RBP22.01■■□□□ 1.11
LIME1-205ENST00000480139 CCL23P55773 120 aa22.01■■□□□ 1.11
LIME1-205ENST00000480139 PPIGQ13427 754 aaKnown RBP eCLIP22.01■■□□□ 1.116e-9■■■■□ 19.6
LIME1-205ENST00000480139 TMEM119Q4V9L6 283 aa22.01■■□□□ 1.11
LIME1-205ENST00000480139 PRPF38BQ5VTL8 546 aaKnown RBP22.01■■□□□ 1.11
LIME1-205ENST00000480139 IER5Q5VY09 327 aa22.01■■□□□ 1.11
LIME1-205ENST00000480139 METTL13Q8N6R0 699 aa22.01■■□□□ 1.11
LIME1-205ENST00000480139 CALML4Q96GE6 196 aa22.01■■□□□ 1.11
LIME1-205ENST00000480139 CDK5RAP3Q96JB5 506 aa22.01■■□□□ 1.11
LIME1-205ENST00000480139 CCDC43Q96MW1 224 aaKnown RBP22.01■■□□□ 1.11
LIME1-205ENST00000480139 CLIC6Q96NY7 704 aa22.01■■□□□ 1.11
LIME1-205ENST00000480139 FAM49AQ9H0Q0 323 aaPredicted RBP22.01■■□□□ 1.11
LIME1-205ENST00000480139 DNM3Q9UQ16 869 aa22.01■■□□□ 1.11
LIME1-205ENST00000480139 SCN5AQ14524 2016 aa22.01■■□□□ 1.11
LIME1-205ENST00000480139 CUTAO60888 179 aa22■■□□□ 1.11
LIME1-205ENST00000480139 PFKMP08237 780 aa22■■□□□ 1.11
LIME1-205ENST00000480139 CSF2RAP15509 400 aa22■■□□□ 1.11
LIME1-205ENST00000480139 MRPS6P82932 125 aaKnown RBP22■■□□□ 1.11
LIME1-205ENST00000480139 MDM2Q00987 491 aaPredicted RBP22■■□□□ 1.11
LIME1-205ENST00000480139 MGAT3Q09327 533 aa22■■□□□ 1.11
LIME1-205ENST00000480139 GRB10Q13322 594 aa22■■□□□ 1.11
LIME1-205ENST00000480139 IPO9Q96P70 1041 aaKnown RBP22■■□□□ 1.11
LIME1-205ENST00000480139 PNMA5Q96PV4 448 aa22■■□□□ 1.11
LIME1-205ENST00000480139 MAP7D2Q96T17 732 aa22■■□□□ 1.11
LIME1-205ENST00000480139 SCAND2PQ9GZW5 306 aaPredicted RBP22■■□□□ 1.11
LIME1-205ENST00000480139 CHMP5Q9NZZ3 219 aa22■■□□□ 1.11
LIME1-205ENST00000480139 EYA4O95677 639 aa21.99■■□□□ 1.11
LIME1-205ENST00000480139 BMP8BP34820 402 aa21.99■■□□□ 1.11
LIME1-205ENST00000480139 TXLNAP40222 546 aa21.99■■□□□ 1.11
LIME1-205ENST00000480139 DNM2P50570 870 aa21.99■■□□□ 1.11
LIME1-205ENST00000480139 CLCN3P51790 818 aa21.99■■□□□ 1.11
LIME1-205ENST00000480139 MKRN4PQ13434 485 aaPredicted RBP21.99■■□□□ 1.11
LIME1-205ENST00000480139 EMC2Q15006 297 aa21.99■■□□□ 1.11
LIME1-205ENST00000480139 LRRC71Q8N4P6 559 aa21.99■■□□□ 1.11
LIME1-205ENST00000480139 LEO1Q8WVC0 666 aaPredicted RBP21.99■■□□□ 1.11
LIME1-205ENST00000480139 SYMPKQ92797 1274 aaKnown RBP21.99■■□□□ 1.11
LIME1-205ENST00000480139 SCLYQ96I15 445 aa21.99■■□□□ 1.11
LIME1-205ENST00000480139 EPSTI1Q96J88 318 aa21.99■■□□□ 1.11
LIME1-205ENST00000480139 SUGCTQ9HAC7 445 aa21.99■■□□□ 1.11
LIME1-205ENST00000480139 IL23AQ9NPF7 189 aa21.99■■□□□ 1.11
LIME1-205ENST00000480139 ARHGEF35A5YM69 484 aa21.98■■□□□ 1.11
LIME1-205ENST00000480139 M0QZ92 97 aa21.98■■□□□ 1.11
LIME1-205ENST00000480139 CHRNA1P02708 482 aa21.98■■□□□ 1.11
LIME1-205ENST00000480139 CXCL10P02778 98 aa21.98■■□□□ 1.11
LIME1-205ENST00000480139 CTSHP09668 335 aa21.98■■□□□ 1.11
LIME1-205ENST00000480139 NCLP19338 710 aaKnown RBP21.98■■□□□ 1.11
LIME1-205ENST00000480139 CDC42EP1Q00587 391 aa21.98■■□□□ 1.11
LIME1-205ENST00000480139 MBTPS1Q14703 1052 aa21.98■■□□□ 1.11
LIME1-205ENST00000480139 AXDND1Q5T1B0 1012 aaPredicted RBP21.98■■□□□ 1.11
LIME1-205ENST00000480139 RPUSD2Q8IZ73 545 aaKnown RBP21.98■■□□□ 1.11
LIME1-205ENST00000480139 TCP11Q8WWU5 503 aa21.98■■□□□ 1.11
LIME1-205ENST00000480139 SPATA32Q96LK8 384 aa21.98■■□□□ 1.11
LIME1-205ENST00000480139 MTRQ99707 1265 aa21.98■■□□□ 1.11
LIME1-205ENST00000480139 BHMT2Q9H2M3 363 aa21.98■■□□□ 1.11
LIME1-205ENST00000480139 ATP6V0A4Q9HBG4 840 aa21.98■■□□□ 1.11
LIME1-205ENST00000480139 TRPV2Q9Y5S1 764 aa21.98■■□□□ 1.11
LIME1-205ENST00000480139 SQORQ9Y6N5 450 aa21.98■■□□□ 1.11
LIME1-205ENST00000480139 A0A087WWV3 80 aa21.97■■□□□ 1.11
LIME1-205ENST00000480139 E9PMD0 336 aa21.97■■□□□ 1.11
LIME1-205ENST00000480139 ME1P48163 572 aa21.97■■□□□ 1.11
LIME1-205ENST00000480139 GPNMBQ14956 572 aa21.97■■□□□ 1.11
LIME1-205ENST00000480139 KARSQ15046 597 aaKnown RBP21.97■■□□□ 1.11
LIME1-205ENST00000480139 SPECC1Q5M775 1068 aa21.97■■□□□ 1.11
LIME1-205ENST00000480139 USP49Q70CQ1 688 aa21.97■■□□□ 1.11
LIME1-205ENST00000480139 KCNK18Q7Z418 384 aa21.97■■□□□ 1.11
LIME1-205ENST00000480139 CELF4Q9BZC1 486 aaKnown RBP21.97■■□□□ 1.11
LIME1-205ENST00000480139 PRO3102Q9H379 93 aa21.97■■□□□ 1.11
LIME1-205ENST00000480139 XPNPEP1Q9NQW7 623 aa21.97■■□□□ 1.11
LIME1-205ENST00000480139 PCDH10Q9P2E7 1040 aa21.97■■□□□ 1.11
LIME1-205ENST00000480139 CCDC39Q9UFE4 941 aa21.97■■□□□ 1.11
LIME1-205ENST00000480139 PCDHA7Q9UN72 937 aa21.97■■□□□ 1.11
LIME1-205ENST00000480139 AKT3Q9Y243 479 aa21.97■■□□□ 1.11
LIME1-205ENST00000480139 CDY2AQ9Y6F7 541 aa21.97■■□□□ 1.11
LIME1-205ENST00000480139 NBNO60934 754 aa21.96■■□□□ 1.11
LIME1-205ENST00000480139 DRP2Q13474 957 aa21.96■■□□□ 1.11
LIME1-205ENST00000480139 ZRSR1Q15695 479 aaKnown RBP21.96■■□□□ 1.11
LIME1-205ENST00000480139 PSRC1Q6PGN9 363 aaPredicted RBP21.96■■□□□ 1.11
LIME1-205ENST00000480139 PADI6Q6TGC4 694 aa21.96■■□□□ 1.11
LIME1-205ENST00000480139 MCPH1Q8NEM0 835 aa21.96■■□□□ 1.11
LIME1-205ENST00000480139 RASSF8Q8NHQ8 419 aa21.96■■□□□ 1.11
LIME1-205ENST00000480139 VWCEQ96DN2 955 aa21.96■■□□□ 1.11
LIME1-205ENST00000480139 CHAMP1Q96JM3 812 aa21.96■■□□□ 1.11
LIME1-205ENST00000480139 USO1O60763 962 aaKnown RBP21.95■■□□□ 1.1
LIME1-205ENST00000480139 GPR32O75388 356 aa21.95■■□□□ 1.1
LIME1-205ENST00000480139 VTNP04004 478 aa21.95■■□□□ 1.1
LIME1-205ENST00000480139 CYP11B2P19099 503 aa21.95■■□□□ 1.1
LIME1-205ENST00000480139 PLCG1P19174 1290 aa21.95■■□□□ 1.1
LIME1-205ENST00000480139 CRYBB1P53674 252 aaPredicted RBP21.95■■□□□ 1.1
LIME1-205ENST00000480139 TMEM62Q0P6H9 643 aa21.95■■□□□ 1.1
LIME1-205ENST00000480139 FAM43BQ6ZT52 329 aaPredicted RBP21.95■■□□□ 1.1
LIME1-205ENST00000480139 SYT2Q8N9I0 419 aaPredicted RBP21.95■■□□□ 1.1
LIME1-205ENST00000480139 USP38Q8NB14 1042 aa21.95■■□□□ 1.1
LIME1-205ENST00000480139 PSPC1Q8WXF1 523 aaKnown RBP21.95■■□□□ 1.1
LIME1-205ENST00000480139 KCND2Q9NZV8 630 aa21.95■■□□□ 1.1
LIME1-205ENST00000480139 SUCLA2Q9P2R7 463 aaPredicted RBP21.95■■□□□ 1.1
LIME1-205ENST00000480139 ASAP2O43150 1006 aa21.94■■□□□ 1.1
LIME1-205ENST00000480139 GPC3P51654 580 aa21.94■■□□□ 1.1
LIME1-205ENST00000480139 EPHB4P54760 987 aa21.94■■□□□ 1.1
LIME1-205ENST00000480139 FBXO47Q5MNV8 452 aa21.94■■□□□ 1.1
LIME1-205ENST00000480139 SHC4Q6S5L8 630 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms