RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 FMR1NBQ8N0W7 255 aaPredicted RBP12.45□□□□□ -0.42
CLDN11-205ENST00000480067 LRRC15Q8TF66 581 aa12.45□□□□□ -0.42
CLDN11-205ENST00000480067 CCDC34Q96HJ3 373 aa12.45□□□□□ -0.42
CLDN11-205ENST00000480067 LRRC27Q9C0I9 530 aa12.45□□□□□ -0.42
CLDN11-205ENST00000480067 TRPV6Q9H1D0 765 aa12.45□□□□□ -0.42
CLDN11-205ENST00000480067 BMP2KQ9NSY1 1161 aaPredicted RBP12.45□□□□□ -0.42
CLDN11-205ENST00000480067 PCDHA2Q9Y5H9 948 aa12.45□□□□□ -0.42
CLDN11-205ENST00000480067 FRMPD3Q5JV73 1810 aa12.45□□□□□ -0.42
CLDN11-205ENST00000480067 MBLAC1A4D2B0 266 aaPredicted RBP12.44□□□□□ -0.42
CLDN11-205ENST00000480067 TLR3O15455 904 aaKnown RBP12.44□□□□□ -0.42
CLDN11-205ENST00000480067 USO1O60763 962 aaKnown RBP12.44□□□□□ -0.42
CLDN11-205ENST00000480067 NR1I2O75469 434 aa12.44□□□□□ -0.42
CLDN11-205ENST00000480067 C22orf31O95567 290 aa12.44□□□□□ -0.42
CLDN11-205ENST00000480067 KRT18P05783 430 aaKnown RBP12.44□□□□□ -0.42
CLDN11-205ENST00000480067 LIG1P18858 919 aa12.44□□□□□ -0.42
CLDN11-205ENST00000480067 CYP11B2P19099 503 aa12.44□□□□□ -0.42
CLDN11-205ENST00000480067 ADAM17P78536 824 aa12.44□□□□□ -0.42
CLDN11-205ENST00000480067 SNW1Q13573 536 aaKnown RBP12.44□□□□□ -0.42
CLDN11-205ENST00000480067 TRIM60Q495X7 471 aa12.44□□□□□ -0.42
CLDN11-205ENST00000480067 RINT1Q6NUQ1 792 aa12.44□□□□□ -0.42
CLDN11-205ENST00000480067 TAF2Q6P1X5 1199 aa12.44□□□□□ -0.42
CLDN11-205ENST00000480067 MAEAQ7L5Y9 396 aa12.44□□□□□ -0.42
CLDN11-205ENST00000480067 ANKRD33Q7Z3H0 272 aa12.44□□□□□ -0.42
CLDN11-205ENST00000480067 GPBP1Q86WP2 473 aa12.44□□□□□ -0.42
CLDN11-205ENST00000480067 CNNM3Q8NE01 707 aa12.44□□□□□ -0.42
CLDN11-205ENST00000480067 MCPH1Q8NEM0 835 aa12.44□□□□□ -0.42
CLDN11-205ENST00000480067 ENGASEQ8NFI3 743 aa12.44□□□□□ -0.42
CLDN11-205ENST00000480067 ZBTB10Q96DT7 871 aa12.44□□□□□ -0.42
CLDN11-205ENST00000480067 TOX2Q96NM4 488 aa12.44□□□□□ -0.42
CLDN11-205ENST00000480067 CEP89Q96ST8 783 aa12.44□□□□□ -0.42
CLDN11-205ENST00000480067 DHX33Q9H6R0 707 aaKnown RBP12.44□□□□□ -0.42
CLDN11-205ENST00000480067 MAGEF1Q9HAY2 307 aa12.44□□□□□ -0.42
CLDN11-205ENST00000480067 ATP6V0A4Q9HBG4 840 aa12.44□□□□□ -0.42
CLDN11-205ENST00000480067 KCND2Q9NZV8 630 aa12.44□□□□□ -0.42
CLDN11-205ENST00000480067 SERTAD1Q9UHV2 236 aa12.44□□□□□ -0.42
CLDN11-205ENST00000480067 ATP11BQ9Y2G3 1177 aa12.44□□□□□ -0.42
CLDN11-205ENST00000480067 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.43□□□□□ -0.42
CLDN11-205ENST00000480067 GAS2O43903 313 aaKnown RBP12.43□□□□□ -0.42
CLDN11-205ENST00000480067 B4GALT4O60513 344 aa12.43□□□□□ -0.42
CLDN11-205ENST00000480067 KINO60870 393 aaKnown RBP12.43□□□□□ -0.42
CLDN11-205ENST00000480067 CYP2C9P11712 490 aa12.43□□□□□ -0.42
CLDN11-205ENST00000480067 TLE2Q04725 743 aa12.43□□□□□ -0.42
CLDN11-205ENST00000480067 EMC2Q15006 297 aa12.43□□□□□ -0.42
CLDN11-205ENST00000480067 SNX17Q15036 470 aa12.43□□□□□ -0.42
CLDN11-205ENST00000480067 LRRC26Q2I0M4 334 aa12.43□□□□□ -0.42
CLDN11-205ENST00000480067 FAM102BQ5T8I3 360 aa12.43□□□□□ -0.42
CLDN11-205ENST00000480067 KANK3Q6NY19 840 aa12.43□□□□□ -0.42
CLDN11-205ENST00000480067 C1orf186Q6ZWK4 172 aa12.43□□□□□ -0.42
CLDN11-205ENST00000480067 SERINC5Q86VE9 423 aa12.43□□□□□ -0.42
CLDN11-205ENST00000480067 FAM126BQ8IXS8 530 aa12.43□□□□□ -0.42
CLDN11-205ENST00000480067 LRRC71Q8N4P6 559 aa12.43□□□□□ -0.42
CLDN11-205ENST00000480067 MTRQ99707 1265 aa12.43□□□□□ -0.42
CLDN11-205ENST00000480067 TNMDQ9H2S6 317 aa12.43□□□□□ -0.42
CLDN11-205ENST00000480067 KBTBD4Q9NVX7 518 aa12.43□□□□□ -0.42
CLDN11-205ENST00000480067 DACT1Q9NYF0 836 aa12.43□□□□□ -0.42
CLDN11-205ENST00000480067 MYH9P35579 1960 aaKnown RBP12.43□□□□□ -0.42
CLDN11-205ENST00000480067 SCN10AQ9Y5Y9 1956 aa12.43□□□□□ -0.42
CLDN11-205ENST00000480067 IGKV6-21A0A0C4DH24 114 aa12.43□□□□□ -0.42
CLDN11-205ENST00000480067 SMIM35A0A1B0GVV1 85 aa12.43□□□□□ -0.42
CLDN11-205ENST00000480067 ACTN4O43707 911 aaKnown RBP12.43□□□□□ -0.42
CLDN11-205ENST00000480067 GUCY2CP25092 1073 aa12.43□□□□□ -0.42
CLDN11-205ENST00000480067 AFMP43652 599 aa12.43□□□□□ -0.42
CLDN11-205ENST00000480067 RTP1P59025 263 aa12.43□□□□□ -0.42
CLDN11-205ENST00000480067 RAD51AP2Q09MP3 1159 aa12.43□□□□□ -0.42
CLDN11-205ENST00000480067 PTK7Q13308 1070 aa12.43□□□□□ -0.42
CLDN11-205ENST00000480067 ARSHQ5FYA8 562 aa12.43□□□□□ -0.42
CLDN11-205ENST00000480067 RUFY4Q6ZNE9 571 aa12.43□□□□□ -0.42
CLDN11-205ENST00000480067 KRBA2Q6ZNG9 492 aa12.43□□□□□ -0.42
CLDN11-205ENST00000480067 RSPH3Q86UC2 560 aa12.43□□□□□ -0.42
CLDN11-205ENST00000480067 TCP11Q8WWU5 503 aa12.43□□□□□ -0.42
CLDN11-205ENST00000480067 STAMQ92783 540 aa12.43□□□□□ -0.42
CLDN11-205ENST00000480067 TMEM143Q96AN5 459 aa12.43□□□□□ -0.42
CLDN11-205ENST00000480067 PAGE5Q96GU1 130 aa12.43□□□□□ -0.42
CLDN11-205ENST00000480067 MAP7D2Q96T17 732 aa12.43□□□□□ -0.42
CLDN11-205ENST00000480067 RUSC1Q9BVN2 902 aa12.43□□□□□ -0.42
CLDN11-205ENST00000480067 TIPINQ9BVW5 301 aa12.43□□□□□ -0.42
CLDN11-205ENST00000480067 FAM49AQ9H0Q0 323 aaPredicted RBP12.43□□□□□ -0.42
CLDN11-205ENST00000480067 PDLIM7Q9NR12 457 aa12.43□□□□□ -0.42
CLDN11-205ENST00000480067 SUCLA2Q9P2R7 463 aaPredicted RBP12.43□□□□□ -0.42
CLDN11-205ENST00000480067 HOOK1Q9UJC3 728 aaKnown RBP12.43□□□□□ -0.42
CLDN11-205ENST00000480067 CD4P01730 458 aa12.42□□□□□ -0.42
CLDN11-205ENST00000480067 RPLP2P05387 115 aaKnown RBP12.42□□□□□ -0.42
CLDN11-205ENST00000480067 PTMSP20962 102 aa12.42□□□□□ -0.42
CLDN11-205ENST00000480067 CLCN3P51790 818 aa12.42□□□□□ -0.42
CLDN11-205ENST00000480067 IER5Q5VY09 327 aa12.42□□□□□ -0.42
CLDN11-205ENST00000480067 DYMQ7RTS9 669 aa12.42□□□□□ -0.42
CLDN11-205ENST00000480067 KIAA0319LQ8IZA0 1049 aa12.42□□□□□ -0.42
CLDN11-205ENST00000480067 NME8Q8N427 588 aa12.42□□□□□ -0.42
CLDN11-205ENST00000480067 DNAJB3Q8WWF6 145 aa12.42□□□□□ -0.42
CLDN11-205ENST00000480067 PSPC1Q8WXF1 523 aaKnown RBP12.42□□□□□ -0.42
CLDN11-205ENST00000480067 DDX12PQ92771 950 aa12.42□□□□□ -0.42
CLDN11-205ENST00000480067 KIFAP3Q92845 792 aa12.42□□□□□ -0.42
CLDN11-205ENST00000480067 TIGD1Q96MW7 591 aa12.42□□□□□ -0.42
CLDN11-205ENST00000480067 CTAGE1Q96RT6 745 aa12.42□□□□□ -0.42
CLDN11-205ENST00000480067 HTATIP2Q9BUP3 242 aa12.42□□□□□ -0.42
CLDN11-205ENST00000480067 AKT3Q9Y243 479 aa12.42□□□□□ -0.42
CLDN11-205ENST00000480067 NPHP3-ACAD11A0A0J9YXS1 232 aa12.41□□□□□ -0.42
CLDN11-205ENST00000480067 MYMKA6NI61 221 aa12.41□□□□□ -0.42
CLDN11-205ENST00000480067 MBD3O95983 291 aa12.41□□□□□ -0.42
CLDN11-205ENST00000480067 THPOP40225 353 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms