RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 GNAQP50148 359 aa11.8□□□□□ -0.52
CHD6-208ENST00000480022 KLC1Q07866 573 aa11.8□□□□□ -0.52
CHD6-208ENST00000480022 TMEM154Q6P9G4 183 aa11.8□□□□□ -0.52
CHD6-208ENST00000480022 ADSSL1Q8N142 457 aa11.8□□□□□ -0.52
CHD6-208ENST00000480022 CCDC97Q96F63 343 aaPredicted RBP11.8□□□□□ -0.52
CHD6-208ENST00000480022 TRIM47Q96LD4 638 aa11.8□□□□□ -0.52
CHD6-208ENST00000480022 KRT23Q9C075 422 aa11.8□□□□□ -0.52
CHD6-208ENST00000480022 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.8□□□□□ -0.52
CHD6-208ENST00000480022 ANAPC4Q9UJX5 808 aa11.8□□□□□ -0.52
CHD6-208ENST00000480022 PLAGL2Q9UPG8 496 aa11.8□□□□□ -0.52
CHD6-208ENST00000480022 PDE6AP16499 860 aa11.8□□□□□ -0.52
CHD6-208ENST00000480022 SP100P23497 879 aaPredicted RBP11.8□□□□□ -0.52
CHD6-208ENST00000480022 ABCD1P33897 745 aa11.8□□□□□ -0.52
CHD6-208ENST00000480022 ADD2P35612 726 aa11.8□□□□□ -0.52
CHD6-208ENST00000480022 SCNN1DP51172 638 aa11.8□□□□□ -0.52
CHD6-208ENST00000480022 DNA2P51530 1060 aa11.8□□□□□ -0.52
CHD6-208ENST00000480022 DIXDC1Q155Q3 683 aa11.8□□□□□ -0.52
CHD6-208ENST00000480022 ZRSR2Q15696 482 aaKnown RBP11.8□□□□□ -0.52
CHD6-208ENST00000480022 GALNTL6Q49A17 601 aa11.8□□□□□ -0.52
CHD6-208ENST00000480022 OXER1Q8TDS5 423 aa11.8□□□□□ -0.52
CHD6-208ENST00000480022 MAIP1Q8WWC4 291 aa11.8□□□□□ -0.52
CHD6-208ENST00000480022 ATXN2LQ8WWM7 1075 aaKnown RBP11.8□□□□□ -0.52
CHD6-208ENST00000480022 KIFAP3Q92845 792 aa11.8□□□□□ -0.52
CHD6-208ENST00000480022 VCXQ9H320 206 aa11.8□□□□□ -0.52
CHD6-208ENST00000480022 PNMA2Q9UL42 364 aa11.8□□□□□ -0.52
CHD6-208ENST00000480022 CCDC88AQ3V6T2 1871 aa11.8□□□□□ -0.52
CHD6-208ENST00000480022 DICER1Q9UPY3 1922 aaKnown RBP11.8□□□□□ -0.52
CHD6-208ENST00000480022 TCRBV5S4A2TA0A5A2 114 aa11.79□□□□□ -0.52
CHD6-208ENST00000480022 E7ENQ6 273 aa11.79□□□□□ -0.52
CHD6-208ENST00000480022 GNAZP19086 355 aa11.79□□□□□ -0.52
CHD6-208ENST00000480022 BNIP1Q12981 228 aa11.79□□□□□ -0.52
CHD6-208ENST00000480022 ZNF280DQ6N043 979 aa11.79□□□□□ -0.52
CHD6-208ENST00000480022 DPY19L2Q6NUT2 758 aa11.79□□□□□ -0.52
CHD6-208ENST00000480022 SGMS1Q86VZ5 419 aa11.79□□□□□ -0.52
CHD6-208ENST00000480022 IQCDQ96DY2 449 aa11.79□□□□□ -0.52
CHD6-208ENST00000480022 PBKQ96KB5 322 aa11.79□□□□□ -0.52
CHD6-208ENST00000480022 INPP4AQ96PE3 977 aaPredicted RBP11.79□□□□□ -0.52
CHD6-208ENST00000480022 SELENOSQ9BQE4 189 aa11.79□□□□□ -0.52
CHD6-208ENST00000480022 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.79□□□□□ -0.52
CHD6-208ENST00000480022 ZNF532Q9HCE3 1301 aa11.79□□□□□ -0.52
CHD6-208ENST00000480022 TESPA1A2RU30 521 aaPredicted RBP11.79□□□□□ -0.52
CHD6-208ENST00000480022 GLTPD2A6NH11 291 aa11.79□□□□□ -0.52
CHD6-208ENST00000480022 BMP15O95972 392 aa11.79□□□□□ -0.52
CHD6-208ENST00000480022 USP17L8P0C7I0 530 aa11.79□□□□□ -0.52
CHD6-208ENST00000480022 PMS1P54277 932 aaKnown RBP11.79□□□□□ -0.52
CHD6-208ENST00000480022 RNASE9P60153 205 aaKnown RBP11.79□□□□□ -0.52
CHD6-208ENST00000480022 PDXDC2PQ6P474 469 aa11.79□□□□□ -0.52
CHD6-208ENST00000480022 ADGRA1Q86SQ6 560 aa11.79□□□□□ -0.52
CHD6-208ENST00000480022 DDX42Q86XP3 938 aaKnown RBP eCLIP11.79□□□□□ -0.52
CHD6-208ENST00000480022 USP38Q8NB14 1042 aa11.79□□□□□ -0.52
CHD6-208ENST00000480022 IGDCC4Q8TDY8 1250 aa11.79□□□□□ -0.52
CHD6-208ENST00000480022 FGD4Q96M96 766 aa11.79□□□□□ -0.52
CHD6-208ENST00000480022 TRAPPC9Q96Q05 1148 aa11.79□□□□□ -0.52
CHD6-208ENST00000480022 RPS6KC1Q96S38 1066 aa11.79□□□□□ -0.52
CHD6-208ENST00000480022 PYM1Q9BRP8 204 aaKnown RBP11.79□□□□□ -0.52
CHD6-208ENST00000480022 UBE2OQ9C0C9 1292 aaKnown RBP11.79□□□□□ -0.52
CHD6-208ENST00000480022 LY9Q9HBG7 655 aa11.79□□□□□ -0.52
CHD6-208ENST00000480022 SLC12A7Q9Y666 1083 aa11.79□□□□□ -0.52
CHD6-208ENST00000480022 B4E1Z4 1266 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 F8VZ95 297 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 ECEL1O95672 775 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 EIF3BP55884 814 aaKnown RBP11.78□□□□□ -0.52
CHD6-208ENST00000480022 UBE3CQ15386 1083 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 TMEM67Q5HYA8 995 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 RNF220Q5VTB9 566 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 CHADLQ6NUI6 762 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 HOOK3Q86VS8 718 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 TBC1D10CQ8IV04 446 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 NKX2-3Q8TAU0 364 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 MTRQ99707 1265 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 NEUROG2Q9H2A3 272 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 MMADHCQ9H3L0 296 aaPredicted RBP11.78□□□□□ -0.52
CHD6-208ENST00000480022 DNAAF2Q9NVR5 837 aaKnown RBP11.78□□□□□ -0.52
CHD6-208ENST00000480022 MYH1P12882 1939 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 DEXIO95424 95 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 CYP7A1P22680 504 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 MYLK4Q86YV6 388 aaPredicted RBP11.78□□□□□ -0.52
CHD6-208ENST00000480022 MICALL2Q8IY33 904 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 MIPOL1Q8TD10 442 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 APPBP2Q92624 585 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 ERGIC2Q96RQ1 377 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 DLGAP2Q9P1A6 1054 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 GGT7Q9UJ14 662 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 TMEM59LQ9UK28 342 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 ZNF232Q9UNY5 417 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 PSME4Q14997 1843 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 SNX3O60493 162 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 MYL1P05976 194 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 CALB2P22676 271 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 FLT3P36888 993 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 RFC5P40937 340 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 MMP13P45452 471 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 SCNN1BP51168 640 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 RAD23BP54727 409 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 ZNF280AP59817 542 aaPredicted RBP11.78□□□□□ -0.52
CHD6-208ENST00000480022 GSTO1P78417 241 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 TSNAXIP1Q2TAA8 658 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 ACBD5Q5T8D3 534 aaPredicted RBP11.78□□□□□ -0.52
CHD6-208ENST00000480022 ASRGL1Q7L266 308 aa11.78□□□□□ -0.52
CHD6-208ENST00000480022 TMC3Q7Z5M5 1100 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms