RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 TMOD1P28289 359 aa16.16■□□□□ 0.18
ATG4B-218ENST00000479554 NPY5RQ15761 445 aa16.16■□□□□ 0.18
ATG4B-218ENST00000479554 UGCGQ16739 394 aa16.16■□□□□ 0.18
ATG4B-218ENST00000479554 LEXMQ3ZCV2 418 aa16.16■□□□□ 0.18
ATG4B-218ENST00000479554 MIER3Q7Z3K6 550 aa16.16■□□□□ 0.18
ATG4B-218ENST00000479554 KRT25Q7Z3Z0 450 aa16.16■□□□□ 0.18
ATG4B-218ENST00000479554 LRRC71Q8N4P6 559 aa16.16■□□□□ 0.18
ATG4B-218ENST00000479554 RDM1Q8NG50 284 aa16.16■□□□□ 0.18
ATG4B-218ENST00000479554 GJA10Q969M2 543 aa16.16■□□□□ 0.18
ATG4B-218ENST00000479554 ADAM2Q99965 735 aa16.16■□□□□ 0.18
ATG4B-218ENST00000479554 SLKQ9H2G2 1235 aaPredicted RBP16.16■□□□□ 0.18
ATG4B-218ENST00000479554 C1orf112Q9NSG2 853 aa16.16■□□□□ 0.18
ATG4B-218ENST00000479554 RNF216Q9NWF9 866 aaPredicted RBP16.16■□□□□ 0.18
ATG4B-218ENST00000479554 KIAA1671Q9BY89 1806 aa16.16■□□□□ 0.18
ATG4B-218ENST00000479554 STK36Q9NRP7 1315 aa16.16■□□□□ 0.18
ATG4B-218ENST00000479554 BRWD1Q9NSI6 2320 aa16.16■□□□□ 0.18
ATG4B-218ENST00000479554 WDR81Q562E7 1941 aa16.15■□□□□ 0.18
ATG4B-218ENST00000479554 CYP3A7-CYP3A51PA0A087WV96 503 aa16.15■□□□□ 0.18
ATG4B-218ENST00000479554 GPR32O75388 356 aa16.15■□□□□ 0.18
ATG4B-218ENST00000479554 PSMD10O75832 226 aa16.15■□□□□ 0.18
ATG4B-218ENST00000479554 CSPG5O95196 566 aa16.15■□□□□ 0.18
ATG4B-218ENST00000479554 MMP1P03956 469 aa16.15■□□□□ 0.18
ATG4B-218ENST00000479554 XBP1P17861 261 aa16.15■□□□□ 0.18
ATG4B-218ENST00000479554 CYP3A7P24462 503 aa16.15■□□□□ 0.18
ATG4B-218ENST00000479554 GATMP50440 423 aa16.15■□□□□ 0.18
ATG4B-218ENST00000479554 ANAPC15P60006 121 aa16.15■□□□□ 0.18
ATG4B-218ENST00000479554 EFCAB12Q6NXP0 572 aa16.15■□□□□ 0.18
ATG4B-218ENST00000479554 MOXD1Q6UVY6 613 aa16.15■□□□□ 0.18
ATG4B-218ENST00000479554 EP400NLQ6ZTU2 488 aa16.15■□□□□ 0.18
ATG4B-218ENST00000479554 FAM228AQ86W67 206 aa16.15■□□□□ 0.18
ATG4B-218ENST00000479554 LINC01465Q8N7H1 131 aa16.15■□□□□ 0.18
ATG4B-218ENST00000479554 P2RX5Q93086 422 aa16.15■□□□□ 0.18
ATG4B-218ENST00000479554 RGS18Q9NS28 235 aa16.15■□□□□ 0.18
ATG4B-218ENST00000479554 TPCN1Q9ULQ1 816 aa16.15■□□□□ 0.18
ATG4B-218ENST00000479554 KCNJ14Q9UNX9 436 aa16.15■□□□□ 0.18
ATG4B-218ENST00000479554 PCDHB7Q9Y5E2 793 aa16.15■□□□□ 0.18
ATG4B-218ENST00000479554 ATG2AQ2TAZ0 1938 aa16.15■□□□□ 0.18
ATG4B-218ENST00000479554 CCDC194A0A1B0GVG4 234 aa16.14■□□□□ 0.17
ATG4B-218ENST00000479554 PFKFB2O60825 505 aa16.14■□□□□ 0.17
ATG4B-218ENST00000479554 SEC24BO95487 1268 aa16.14■□□□□ 0.17
ATG4B-218ENST00000479554 NLRP11P59045 1033 aaKnown RBP16.14■□□□□ 0.17
ATG4B-218ENST00000479554 TBC1D8BQ0IIM8 1120 aa16.14■□□□□ 0.17
ATG4B-218ENST00000479554 ANKRD1Q15327 319 aa16.14■□□□□ 0.17
ATG4B-218ENST00000479554 INF2Q27J81 1249 aa16.14■□□□□ 0.17
ATG4B-218ENST00000479554 LETM2Q2VYF4 491 aa16.14■□□□□ 0.17
ATG4B-218ENST00000479554 NAALADL2Q58DX5 795 aa16.14■□□□□ 0.17
ATG4B-218ENST00000479554 SLC24A5Q71RS6 500 aa16.14■□□□□ 0.17
ATG4B-218ENST00000479554 ZNF710Q8N1W2 664 aa16.14■□□□□ 0.17
ATG4B-218ENST00000479554 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.14■□□□□ 0.17
ATG4B-218ENST00000479554 ETNPPLQ8TBG4 499 aa16.14■□□□□ 0.17
ATG4B-218ENST00000479554 NEK9Q8TD19 979 aa16.14■□□□□ 0.17
ATG4B-218ENST00000479554 PABPC5Q96DU9 382 aaKnown RBP16.14■□□□□ 0.17
ATG4B-218ENST00000479554 MBOAT7Q96N66 472 aa16.14■□□□□ 0.17
ATG4B-218ENST00000479554 PHF20Q9BVI0 1012 aa16.14■□□□□ 0.17
ATG4B-218ENST00000479554 ALG13Q9NP73 1137 aaKnown RBP16.14■□□□□ 0.17
ATG4B-218ENST00000479554 SEPT9Q9UHD8 586 aaPredicted RBP16.14■□□□□ 0.17
ATG4B-218ENST00000479554 DDX25Q9UHL0 483 aaKnown RBP16.14■□□□□ 0.17
ATG4B-218ENST00000479554 C9IYK1 514 aa16.13■□□□□ 0.17
ATG4B-218ENST00000479554 H3BQ06 376 aaPredicted RBP16.13■□□□□ 0.17
ATG4B-218ENST00000479554 PUS10Q3MIT2 529 aaKnown RBP16.13■□□□□ 0.17
ATG4B-218ENST00000479554 PTCRAQ6ISU1 281 aaPredicted RBP16.13■□□□□ 0.17
ATG4B-218ENST00000479554 SCLT1Q96NL6 688 aa16.13■□□□□ 0.17
ATG4B-218ENST00000479554 CLDND1Q9NY35 253 aa16.13■□□□□ 0.17
ATG4B-218ENST00000479554 PLAGL2Q9UPG8 496 aa16.13■□□□□ 0.17
ATG4B-218ENST00000479554 TBKBP1A7MCY6 615 aa16.12■□□□□ 0.17
ATG4B-218ENST00000479554 NCK2O43639 380 aa16.12■□□□□ 0.17
ATG4B-218ENST00000479554 SLC37A4O43826 429 aa16.12■□□□□ 0.17
ATG4B-218ENST00000479554 EIF4BP23588 611 aaKnown RBP16.12■□□□□ 0.17
ATG4B-218ENST00000479554 AK2P54819 239 aa16.12■□□□□ 0.17
ATG4B-218ENST00000479554 COL19A1Q14993 1142 aa16.12■□□□□ 0.17
ATG4B-218ENST00000479554 MTERF2Q49AM1 385 aa16.12■□□□□ 0.17
ATG4B-218ENST00000479554 XKR3Q5GH77 459 aa16.12■□□□□ 0.17
ATG4B-218ENST00000479554 SPOUT1Q5T280 376 aaKnown RBP16.12■□□□□ 0.17
ATG4B-218ENST00000479554 B3GNT9Q6UX72 402 aa16.12■□□□□ 0.17
ATG4B-218ENST00000479554 NEK8Q86SG6 692 aa16.12■□□□□ 0.17
ATG4B-218ENST00000479554 KLHL23Q8NBE8 558 aa16.12■□□□□ 0.17
ATG4B-218ENST00000479554 ADAMTS10Q9H324 1103 aa16.12■□□□□ 0.17
ATG4B-218ENST00000479554 ITGB1P05556 798 aa16.11■□□□□ 0.17
ATG4B-218ENST00000479554 IL9P15248 144 aa16.11■□□□□ 0.17
ATG4B-218ENST00000479554 GCFC2P16383 781 aaKnown RBP16.11■□□□□ 0.17
ATG4B-218ENST00000479554 GPC3P51654 580 aa16.11■□□□□ 0.17
ATG4B-218ENST00000479554 HYAL1Q12794 435 aa16.11■□□□□ 0.17
ATG4B-218ENST00000479554 DSC3Q14574 896 aa16.11■□□□□ 0.17
ATG4B-218ENST00000479554 TARBP2Q15633 366 aaKnown RBP16.11■□□□□ 0.17
ATG4B-218ENST00000479554 FAM102BQ5T8I3 360 aa16.11■□□□□ 0.17
ATG4B-218ENST00000479554 NLRP7Q8WX94 980 aa16.11■□□□□ 0.17
ATG4B-218ENST00000479554 WASF1Q92558 559 aa16.11■□□□□ 0.17
ATG4B-218ENST00000479554 PPP2R3CQ969Q6 453 aa16.11■□□□□ 0.17
ATG4B-218ENST00000479554 ZNF668Q96K58 619 aaPredicted RBP16.11■□□□□ 0.17
ATG4B-218ENST00000479554 NIFKQ9BYG3 293 aaKnown RBP16.11■□□□□ 0.17
ATG4B-218ENST00000479554 ELAC1Q9H777 363 aaKnown RBP16.11■□□□□ 0.17
ATG4B-218ENST00000479554 ATP6V0A4Q9HBG4 840 aa16.11■□□□□ 0.17
ATG4B-218ENST00000479554 AAASQ9NRG9 546 aa16.11■□□□□ 0.17
ATG4B-218ENST00000479554 GJB4Q9NTQ9 266 aa16.11■□□□□ 0.17
ATG4B-218ENST00000479554 TMEM161AQ9NX61 479 aa16.11■□□□□ 0.17
ATG4B-218ENST00000479554 ORC3Q9UBD5 711 aaPredicted RBP16.11■□□□□ 0.17
ATG4B-218ENST00000479554 FNDC1Q4ZHG4 1894 aaPredicted RBP16.11■□□□□ 0.17
ATG4B-218ENST00000479554 TMEM150BA6NC51 233 aa16.1■□□□□ 0.17
ATG4B-218ENST00000479554 GRXCR2A6NFK2 248 aa16.1■□□□□ 0.17
ATG4B-218ENST00000479554 DTNBO60941 627 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms