RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 AK2P54819 239 aa19.63■□□□□ 0.73
ECHDC1-216ENST00000479525 NLRP11P59045 1033 aaKnown RBP19.63■□□□□ 0.73
ECHDC1-216ENST00000479525 DRP2Q13474 957 aa19.63■□□□□ 0.73
ECHDC1-216ENST00000479525 MTERF2Q49AM1 385 aa19.63■□□□□ 0.73
ECHDC1-216ENST00000479525 MIER3Q7Z3K6 550 aa19.63■□□□□ 0.73
ECHDC1-216ENST00000479525 CRIPAKQ8N1N5 446 aa19.63■□□□□ 0.73
ECHDC1-216ENST00000479525 FTHL17Q9BXU8 183 aa19.63■□□□□ 0.73
ECHDC1-216ENST00000479525 SLKQ9H2G2 1235 aaPredicted RBP19.63■□□□□ 0.73
ECHDC1-216ENST00000479525 NSUN3Q9H649 340 aaKnown RBP19.63■□□□□ 0.73
ECHDC1-216ENST00000479525 CLDND1Q9NY35 253 aa19.63■□□□□ 0.73
ECHDC1-216ENST00000479525 SEPT9Q9UHD8 586 aaPredicted RBP19.63■□□□□ 0.73
ECHDC1-216ENST00000479525 SQORQ9Y6N5 450 aa19.63■□□□□ 0.73
ECHDC1-216ENST00000479525 ARID2Q68CP9 1835 aa19.63■□□□□ 0.73
ECHDC1-216ENST00000479525 BDP1A6H8Y1 2624 aa19.63■□□□□ 0.73
ECHDC1-216ENST00000479525 DENND3A2RUS2 1198 aa19.62■□□□□ 0.73
ECHDC1-216ENST00000479525 LINC01565O15544 149 aa19.62■□□□□ 0.73
ECHDC1-216ENST00000479525 PSMD10O75832 226 aa19.62■□□□□ 0.73
ECHDC1-216ENST00000479525 CTDNEP1O95476 244 aa19.62■□□□□ 0.73
ECHDC1-216ENST00000479525 USP11P51784 963 aa19.62■□□□□ 0.73
ECHDC1-216ENST00000479525 LETM2Q2VYF4 491 aa19.62■□□□□ 0.73
ECHDC1-216ENST00000479525 TIGD5Q53EQ6 642 aa19.62■□□□□ 0.73
ECHDC1-216ENST00000479525 EARS2Q5JPH6 523 aaKnown RBP19.62■□□□□ 0.73
ECHDC1-216ENST00000479525 CLP1Q92989 425 aaKnown RBP19.62■□□□□ 0.73
ECHDC1-216ENST00000479525 EPHX3Q9H6B9 360 aa19.62■□□□□ 0.73
ECHDC1-216ENST00000479525 TBKBP1A7MCY6 615 aa19.61■□□□□ 0.73
ECHDC1-216ENST00000479525 C5orf67F2Z3F1 127 aa19.61■□□□□ 0.73
ECHDC1-216ENST00000479525 ITGB1P05556 798 aa19.61■□□□□ 0.73
ECHDC1-216ENST00000479525 FGFR1P11362 822 aa19.61■□□□□ 0.73
ECHDC1-216ENST00000479525 IRS1P35568 1242 aa19.61■□□□□ 0.73
ECHDC1-216ENST00000479525 SARSP49591 514 aaKnown RBP19.61■□□□□ 0.73
ECHDC1-216ENST00000479525 DLX2Q07687 328 aaPredicted RBP19.61■□□□□ 0.73
ECHDC1-216ENST00000479525 NONOQ15233 471 aaKnown RBP eCLIP19.61■□□□□ 0.73
ECHDC1-216ENST00000479525 SPOUT1Q5T280 376 aaKnown RBP19.61■□□□□ 0.73
ECHDC1-216ENST00000479525 CPLX2Q6PUV4 134 aaKnown RBP19.61■□□□□ 0.73
ECHDC1-216ENST00000479525 ADGRD2Q7Z7M1 963 aa19.61■□□□□ 0.73
ECHDC1-216ENST00000479525 PIAS4Q8N2W9 510 aaPredicted RBP19.61■□□□□ 0.73
ECHDC1-216ENST00000479525 KLHL23Q8NBE8 558 aa19.61■□□□□ 0.73
ECHDC1-216ENST00000479525 C11orf84Q9BUA3 381 aaPredicted RBP19.61■□□□□ 0.73
ECHDC1-216ENST00000479525 EPB41L2O43491 1005 aaKnown RBP19.6■□□□□ 0.73
ECHDC1-216ENST00000479525 RPLP2P05387 115 aaKnown RBP19.6■□□□□ 0.73
ECHDC1-216ENST00000479525 STAG3L1P0CL83 205 aa19.6■□□□□ 0.73
ECHDC1-216ENST00000479525 CRYBB1P53674 252 aaPredicted RBP19.6■□□□□ 0.73
ECHDC1-216ENST00000479525 HYAL1Q12794 435 aa19.6■□□□□ 0.73
ECHDC1-216ENST00000479525 CAMK1Q14012 370 aa19.6■□□□□ 0.73
ECHDC1-216ENST00000479525 Q4G0T1 1027 aa19.6■□□□□ 0.73
ECHDC1-216ENST00000479525 PLA2G4FQ68DD2 849 aa19.6■□□□□ 0.73
ECHDC1-216ENST00000479525 PTCRAQ6ISU1 281 aaPredicted RBP19.6■□□□□ 0.73
ECHDC1-216ENST00000479525 CMTR2Q8IYT2 770 aaKnown RBP19.6■□□□□ 0.73
ECHDC1-216ENST00000479525 LINC01465Q8N7H1 131 aa19.6■□□□□ 0.73
ECHDC1-216ENST00000479525 DAGLBQ8NCG7 672 aa19.6■□□□□ 0.73
ECHDC1-216ENST00000479525 ETNPPLQ8TBG4 499 aa19.6■□□□□ 0.73
ECHDC1-216ENST00000479525 PHF20Q9BVI0 1012 aa19.6■□□□□ 0.73
ECHDC1-216ENST00000479525 BMP2KQ9NSY1 1161 aaPredicted RBP19.6■□□□□ 0.73
ECHDC1-216ENST00000479525 DDX25Q9UHL0 483 aaKnown RBP19.6■□□□□ 0.73
ECHDC1-216ENST00000479525 PCDHB7Q9Y5E2 793 aa19.6■□□□□ 0.73
ECHDC1-216ENST00000479525 EML1O00423 815 aa19.59■□□□□ 0.73
ECHDC1-216ENST00000479525 PFKFB2O60825 505 aa19.59■□□□□ 0.73
ECHDC1-216ENST00000479525 SEC24BO95487 1268 aa19.59■□□□□ 0.73
ECHDC1-216ENST00000479525 COL9A1P20849 921 aa19.59■□□□□ 0.73
ECHDC1-216ENST00000479525 LEXMQ3ZCV2 418 aa19.59■□□□□ 0.73
ECHDC1-216ENST00000479525 PIK3AP1Q6ZUJ8 805 aa19.59■□□□□ 0.73
ECHDC1-216ENST00000479525 RNF169Q8NCN4 708 aa19.59■□□□□ 0.73
ECHDC1-216ENST00000479525 FAM167AQ96KS9 214 aa19.59■□□□□ 0.73
ECHDC1-216ENST00000479525 SCLT1Q96NL6 688 aa19.59■□□□□ 0.73
ECHDC1-216ENST00000479525 MAP7D2Q96T17 732 aa19.59■□□□□ 0.73
ECHDC1-216ENST00000479525 RIT2Q99578 217 aa19.59■□□□□ 0.73
ECHDC1-216ENST00000479525 PLAGL2Q9UPG8 496 aa19.59■□□□□ 0.73
ECHDC1-216ENST00000479525 FAM86C2PA6NEL3 165 aa19.58■□□□□ 0.73
ECHDC1-216ENST00000479525 C9IYK1 514 aa19.58■□□□□ 0.73
ECHDC1-216ENST00000479525 RB1P06400 928 aa19.58■□□□□ 0.73
ECHDC1-216ENST00000479525 JAK3P52333 1124 aa19.58■□□□□ 0.73
ECHDC1-216ENST00000479525 SPPL3Q8TCT6 385 aa19.58■□□□□ 0.73
ECHDC1-216ENST00000479525 ADAMTS10Q9H324 1103 aa19.58■□□□□ 0.73
ECHDC1-216ENST00000479525 RGS18Q9NS28 235 aa19.58■□□□□ 0.73
ECHDC1-216ENST00000479525 NRBP2Q9NSY0 501 aa19.58■□□□□ 0.73
ECHDC1-216ENST00000479525 ORC3Q9UBD5 711 aaPredicted RBP19.58■□□□□ 0.73
ECHDC1-216ENST00000479525 CEP131Q9UPN4 1083 aa19.58■□□□□ 0.73
ECHDC1-216ENST00000479525 CYP3A7-CYP3A51PA0A087WV96 503 aa19.57■□□□□ 0.72
ECHDC1-216ENST00000479525 CCDC194A0A1B0GVG4 234 aa19.57■□□□□ 0.72
ECHDC1-216ENST00000479525 GPR182O15218 404 aa19.57■□□□□ 0.72
ECHDC1-216ENST00000479525 STBD1O95210 358 aa19.57■□□□□ 0.72
ECHDC1-216ENST00000479525 CYP3A7P24462 503 aa19.57■□□□□ 0.72
ECHDC1-216ENST00000479525 LTBRP36941 435 aa19.57■□□□□ 0.72
ECHDC1-216ENST00000479525 PBX3P40426 434 aa19.57■□□□□ 0.72
ECHDC1-216ENST00000479525 GPC3P51654 580 aa19.57■□□□□ 0.72
ECHDC1-216ENST00000479525 TBC1D8BQ0IIM8 1120 aa19.57■□□□□ 0.72
ECHDC1-216ENST00000479525 NR5A1Q13285 461 aa19.57■□□□□ 0.72
ECHDC1-216ENST00000479525 DSC3Q14574 896 aa19.57■□□□□ 0.72
ECHDC1-216ENST00000479525 ME3Q16798 604 aa19.57■□□□□ 0.72
ECHDC1-216ENST00000479525 LONRF3Q496Y0 759 aa19.57■□□□□ 0.72
ECHDC1-216ENST00000479525 KRT25Q7Z3Z0 450 aa19.57■□□□□ 0.72
ECHDC1-216ENST00000479525 RBM23Q86U06 439 aaKnown RBP19.57■□□□□ 0.72
ECHDC1-216ENST00000479525 NEK9Q8TD19 979 aa19.57■□□□□ 0.72
ECHDC1-216ENST00000479525 POF1BQ8WVV4 589 aa19.57■□□□□ 0.72
ECHDC1-216ENST00000479525 PABPC5Q96DU9 382 aaKnown RBP19.57■□□□□ 0.72
ECHDC1-216ENST00000479525 MBOAT7Q96N66 472 aa19.57■□□□□ 0.72
ECHDC1-216ENST00000479525 RWDD3Q9Y3V2 267 aa19.57■□□□□ 0.72
ECHDC1-216ENST00000479525 DDX11L8A8MPP1 907 aa19.57■□□□□ 0.72
ECHDC1-216ENST00000479525 MAGEB2O15479 319 aa19.57■□□□□ 0.72
ECHDC1-216ENST00000479525 TBX10O75333 385 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms