RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 CEP104O60308 925 aa26.84■■□□□ 1.89
SYNGAP1-206ENST00000479510 CCDC172P0C7W6 258 aa26.84■■□□□ 1.89
SYNGAP1-206ENST00000479510 RBM5P52756 815 aaKnown RBP eCLIP26.84■■□□□ 1.89
SYNGAP1-206ENST00000479510 OTOP1Q7RTM1 612 aa26.84■■□□□ 1.89
SYNGAP1-206ENST00000479510 DBNDD1Q9H9R9 158 aa26.84■■□□□ 1.89
SYNGAP1-206ENST00000479510 PARVGQ9HBI0 331 aa26.84■■□□□ 1.89
SYNGAP1-206ENST00000479510 DIS3Q9Y2L1 958 aaKnown RBP26.84■■□□□ 1.89
SYNGAP1-206ENST00000479510 ZMYM2Q9UBW7 1377 aa26.84■■□□□ 1.89
SYNGAP1-206ENST00000479510 DDX3XO00571 662 aaKnown RBP eCLIP26.83■■□□□ 1.89
SYNGAP1-206ENST00000479510 PSMD10O75832 226 aa26.83■■□□□ 1.89
SYNGAP1-206ENST00000479510 ZNF131P52739 623 aa26.83■■□□□ 1.89
SYNGAP1-206ENST00000479510 SLC30A5Q8TAD4 765 aa26.83■■□□□ 1.89
SYNGAP1-206ENST00000479510 BCAS4Q8TDM0 211 aa26.83■■□□□ 1.89
SYNGAP1-206ENST00000479510 SLC5A5Q92911 643 aa26.83■■□□□ 1.89
SYNGAP1-206ENST00000479510 KCNQ5Q9NR82 932 aa26.83■■□□□ 1.89
SYNGAP1-206ENST00000479510 PRR12Q9ULL5 1215 aa26.83■■□□□ 1.89
SYNGAP1-206ENST00000479510 NCANO14594 1321 aa26.83■■□□□ 1.89
SYNGAP1-206ENST00000479510 SOX5P35711 763 aa26.83■■□□□ 1.89
SYNGAP1-206ENST00000479510 SNAP25P60880 206 aa26.83■■□□□ 1.89
SYNGAP1-206ENST00000479510 PPP2R5AQ15172 486 aa26.83■■□□□ 1.89
SYNGAP1-206ENST00000479510 MEX3CQ5U5Q3 659 aaKnown RBP26.83■■□□□ 1.89
SYNGAP1-206ENST00000479510 KLHL7Q8IXQ5 586 aa26.83■■□□□ 1.89
SYNGAP1-206ENST00000479510 METTL13Q8N6R0 699 aa26.83■■□□□ 1.89
SYNGAP1-206ENST00000479510 EHMT1Q9H9B1 1298 aa26.83■■□□□ 1.89
SYNGAP1-206ENST00000479510 ODF2LQ9ULJ1 636 aa26.83■■□□□ 1.89
SYNGAP1-206ENST00000479510 PCDHB13Q9Y5F0 798 aa26.83■■□□□ 1.89
SYNGAP1-206ENST00000479510 AFF2P51816 1311 aa26.83■■□□□ 1.88
SYNGAP1-206ENST00000479510 FRMPD4Q14CM0 1322 aa26.83■■□□□ 1.88
SYNGAP1-206ENST00000479510 MYCT1Q8N699 235 aa26.82■■□□□ 1.88
SYNGAP1-206ENST00000479510 ATP6V1G3Q96LB4 118 aa26.82■■□□□ 1.88
SYNGAP1-206ENST00000479510 RGL1Q9NZL6 768 aa26.82■■□□□ 1.88
SYNGAP1-206ENST00000479510 NOC2LQ9Y3T9 749 aaKnown RBP26.82■■□□□ 1.88
SYNGAP1-206ENST00000479510 SLITRK3O94933 977 aa26.81■■□□□ 1.88
SYNGAP1-206ENST00000479510 GDF11O95390 407 aa26.81■■□□□ 1.88
SYNGAP1-206ENST00000479510 KRT14P02533 472 aa26.81■■□□□ 1.88
SYNGAP1-206ENST00000479510 RFX1P22670 979 aa26.81■■□□□ 1.88
SYNGAP1-206ENST00000479510 HOXA13P31271 388 aaPredicted RBP26.81■■□□□ 1.88
SYNGAP1-206ENST00000479510 GUCY2FP51841 1108 aa26.81■■□□□ 1.88
SYNGAP1-206ENST00000479510 ERVK-9P63128 1117 aa26.81■■□□□ 1.88
SYNGAP1-206ENST00000479510 HS2ST1Q7LGA3 356 aa26.81■■□□□ 1.88
SYNGAP1-206ENST00000479510 SPATS2Q86XZ4 545 aaKnown RBP26.81■■□□□ 1.88
SYNGAP1-206ENST00000479510 HES6Q96HZ4 224 aa26.81■■□□□ 1.88
SYNGAP1-206ENST00000479510 DMAC2Q9NW81 257 aa26.81■■□□□ 1.88
SYNGAP1-206ENST00000479510 AJAP1Q9UKB5 411 aaPredicted RBP26.81■■□□□ 1.88
SYNGAP1-206ENST00000479510 ATXN2Q99700 1313 aaKnown RBP26.81■■□□□ 1.88
SYNGAP1-206ENST00000479510 A0A087WUV0 522 aaPredicted RBP26.81■■□□□ 1.88
SYNGAP1-206ENST00000479510 CLIC2O15247 247 aa26.81■■□□□ 1.88
SYNGAP1-206ENST00000479510 TMEM253P0C7T8 217 aa26.81■■□□□ 1.88
SYNGAP1-206ENST00000479510 CCT5P48643 541 aa26.81■■□□□ 1.88
SYNGAP1-206ENST00000479510 MYBPC2Q14324 1141 aa26.81■■□□□ 1.88
SYNGAP1-206ENST00000479510 LRCH2Q5VUJ6 765 aa26.81■■□□□ 1.88
SYNGAP1-206ENST00000479510 NT5DC3Q86UY8 548 aa26.81■■□□□ 1.88
SYNGAP1-206ENST00000479510 CYP2W1Q8TAV3 490 aa26.81■■□□□ 1.88
SYNGAP1-206ENST00000479510 COL11A2P13942 1736 aaPredicted RBP26.8■■□□□ 1.88
SYNGAP1-206ENST00000479510 F8VZ95 297 aa26.8■■□□□ 1.88
SYNGAP1-206ENST00000479510 SART1O43290 800 aaKnown RBP26.8■■□□□ 1.88
SYNGAP1-206ENST00000479510 GH2P01242 217 aa26.8■■□□□ 1.88
SYNGAP1-206ENST00000479510 FMO5P49326 533 aa26.8■■□□□ 1.88
SYNGAP1-206ENST00000479510 RNASE9P60153 205 aaKnown RBP26.8■■□□□ 1.88
SYNGAP1-206ENST00000479510 PPP2R5EQ16537 467 aa26.8■■□□□ 1.88
SYNGAP1-206ENST00000479510 MAATS1Q7Z4T9 603 aa26.8■■□□□ 1.88
SYNGAP1-206ENST00000479510 CCDC26Q8TAB7 109 aa26.8■■□□□ 1.88
SYNGAP1-206ENST00000479510 NACC1Q96RE7 527 aa26.8■■□□□ 1.88
SYNGAP1-206ENST00000479510 PCDHAC2Q9Y5I4 1007 aa26.8■■□□□ 1.88
SYNGAP1-206ENST00000479510 CPP00450 1065 aa26.8■■□□□ 1.88
SYNGAP1-206ENST00000479510 ECHS1P30084 290 aa26.8■■□□□ 1.88
SYNGAP1-206ENST00000479510 PRELPP51888 382 aa26.8■■□□□ 1.88
SYNGAP1-206ENST00000479510 KCNA1Q09470 495 aa26.8■■□□□ 1.88
SYNGAP1-206ENST00000479510 MTMR3Q13615 1198 aa26.8■■□□□ 1.88
SYNGAP1-206ENST00000479510 CLUL1Q15846 466 aa26.8■■□□□ 1.88
SYNGAP1-206ENST00000479510 B4GALNT4Q76KP1 1039 aa26.8■■□□□ 1.88
SYNGAP1-206ENST00000479510 U2AF1L4Q8WU68 220 aaKnown RBP26.8■■□□□ 1.88
SYNGAP1-206ENST00000479510 SEC14L1Q92503 715 aa26.8■■□□□ 1.88
SYNGAP1-206ENST00000479510 WDR11Q9BZH6 1224 aa26.8■■□□□ 1.88
SYNGAP1-206ENST00000479510 PLEKHA4Q9H4M7 779 aa26.8■■□□□ 1.88
SYNGAP1-206ENST00000479510 GOLGA6L10A6NI86 522 aa26.79■■□□□ 1.88
SYNGAP1-206ENST00000479510 KRIT1O00522 736 aa26.79■■□□□ 1.88
SYNGAP1-206ENST00000479510 ECE2O60344 883 aa26.79■■□□□ 1.88
SYNGAP1-206ENST00000479510 EVI5O60447 810 aa26.79■■□□□ 1.88
SYNGAP1-206ENST00000479510 STAT2P52630 851 aa26.79■■□□□ 1.88
SYNGAP1-206ENST00000479510 ZNF720Q7Z2F6 126 aa26.79■■□□□ 1.88
SYNGAP1-206ENST00000479510 SLC9A9Q8IVB4 645 aa26.79■■□□□ 1.88
SYNGAP1-206ENST00000479510 TPH2Q8IWU9 490 aa26.79■■□□□ 1.88
SYNGAP1-206ENST00000479510 RFFLQ8WZ73 363 aa26.79■■□□□ 1.88
SYNGAP1-206ENST00000479510 VTI1AQ96AJ9 217 aa26.79■■□□□ 1.88
SYNGAP1-206ENST00000479510 SYT11Q9BT88 431 aa26.79■■□□□ 1.88
SYNGAP1-206ENST00000479510 WDR18Q9BV38 432 aa26.79■■□□□ 1.88
SYNGAP1-206ENST00000479510 HERC5Q9UII4 1024 aaKnown RBP26.79■■□□□ 1.88
SYNGAP1-206ENST00000479510 AMFRQ9UKV5 643 aa26.79■■□□□ 1.88
SYNGAP1-206ENST00000479510 FRMD4BQ9Y2L6 1034 aa26.79■■□□□ 1.88
SYNGAP1-206ENST00000479510 ZNF646O15015 1829 aaPredicted RBP26.79■■□□□ 1.88
SYNGAP1-206ENST00000479510 TMCO5BA8MYB1 307 aa26.78■■□□□ 1.88
SYNGAP1-206ENST00000479510 CTTNQ14247 550 aaKnown RBP26.78■■□□□ 1.88
SYNGAP1-206ENST00000479510 HLTFQ14527 1009 aaKnown RBP eCLIP26.78■■□□□ 1.88
SYNGAP1-206ENST00000479510 ARFGAP2Q8N6H7 521 aa26.78■■□□□ 1.88
SYNGAP1-206ENST00000479510 OLIG1Q8TAK6 271 aa26.78■■□□□ 1.88
SYNGAP1-206ENST00000479510 DYDC2Q96IM9 177 aa26.78■■□□□ 1.88
SYNGAP1-206ENST00000479510 GCOM1H8Y6P7 765 aaPredicted RBP26.78■■□□□ 1.88
SYNGAP1-206ENST00000479510 POLR2MP0CAP2 368 aa26.78■■□□□ 1.88
SYNGAP1-206ENST00000479510 NR1D1P20393 614 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms