RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 NT5C3AQ9H0P0 336 aa27.9■■■□□ 2.06
PERM1-203ENST00000479361 DDX19AQ9NUU7 478 aaKnown RBP27.9■■■□□ 2.06
PERM1-203ENST00000479361 IGKV6-21A0A0C4DH24 114 aa27.89■■■□□ 2.06
PERM1-203ENST00000479361 GAS2O43903 313 aaKnown RBP27.89■■■□□ 2.06
PERM1-203ENST00000479361 CLCN3P51790 818 aa27.89■■■□□ 2.06
PERM1-203ENST00000479361 GRIN1Q05586 938 aa27.89■■■□□ 2.06
PERM1-203ENST00000479361 HYIQ5T013 277 aa27.89■■■□□ 2.06
PERM1-203ENST00000479361 CABP7Q86V35 215 aa27.89■■■□□ 2.06
PERM1-203ENST00000479361 LRRC71Q8N4P6 559 aa27.89■■■□□ 2.06
PERM1-203ENST00000479361 LINC01465Q8N7H1 131 aa27.89■■■□□ 2.06
PERM1-203ENST00000479361 ZNF579Q8NAF0 562 aaKnown RBP27.89■■■□□ 2.06
PERM1-203ENST00000479361 CSRNP2Q9H175 543 aa27.89■■■□□ 2.06
PERM1-203ENST00000479361 DHX33Q9H6R0 707 aaKnown RBP27.89■■■□□ 2.06
PERM1-203ENST00000479361 DNM3Q9UQ16 869 aa27.89■■■□□ 2.06
PERM1-203ENST00000479361 AKT3Q9Y243 479 aa27.89■■■□□ 2.06
PERM1-203ENST00000479361 TANC1Q9C0D5 1861 aa27.89■■■□□ 2.05
PERM1-203ENST00000479361 DGAT1O75907 488 aa27.88■■■□□ 2.05
PERM1-203ENST00000479361 KRT85P78386 507 aa27.88■■■□□ 2.05
PERM1-203ENST00000479361 ZRSR1Q15695 479 aaKnown RBP27.88■■■□□ 2.05
PERM1-203ENST00000479361 ECM1Q16610 540 aa27.88■■■□□ 2.05
PERM1-203ENST00000479361 PSRC1Q6PGN9 363 aaPredicted RBP27.88■■■□□ 2.05
PERM1-203ENST00000479361 CALML4Q96GE6 196 aa27.88■■■□□ 2.05
PERM1-203ENST00000479361 CIZ1Q9ULV3 898 aaPredicted RBP27.88■■■□□ 2.05
PERM1-203ENST00000479361 TRPV2Q9Y5S1 764 aa27.88■■■□□ 2.05
PERM1-203ENST00000479361 CDY2AQ9Y6F7 541 aa27.88■■■□□ 2.05
PERM1-203ENST00000479361 CHRNA1P02708 482 aa27.87■■■□□ 2.05
PERM1-203ENST00000479361 MGAT3Q09327 533 aa27.87■■■□□ 2.05
PERM1-203ENST00000479361 DEFB128Q7Z7B8 93 aa27.87■■■□□ 2.05
PERM1-203ENST00000479361 RASSF8Q8NHQ8 419 aa27.87■■■□□ 2.05
PERM1-203ENST00000479361 RBM19Q9Y4C8 960 aaKnown RBP27.87■■■□□ 2.05
PERM1-203ENST00000479361 A0A087WWV3 80 aa27.86■■■□□ 2.05
PERM1-203ENST00000479361 ARHGEF35A5YM69 484 aa27.86■■■□□ 2.05
PERM1-203ENST00000479361 NCLP19338 710 aaKnown RBP27.86■■■□□ 2.05
PERM1-203ENST00000479361 TXLNAP40222 546 aa27.86■■■□□ 2.05
PERM1-203ENST00000479361 CDC42EP1Q00587 391 aa27.86■■■□□ 2.05
PERM1-203ENST00000479361 TMEM62Q0P6H9 643 aa27.86■■■□□ 2.05
PERM1-203ENST00000479361 EMC2Q15006 297 aa27.86■■■□□ 2.05
PERM1-203ENST00000479361 TCP11Q8WWU5 503 aa27.86■■■□□ 2.05
PERM1-203ENST00000479361 CLIC6Q96NY7 704 aa27.86■■■□□ 2.05
PERM1-203ENST00000479361 MTRQ99707 1265 aa27.86■■■□□ 2.05
PERM1-203ENST00000479361 CELF4Q9BZC1 486 aaKnown RBP27.86■■■□□ 2.05
PERM1-203ENST00000479361 CCSER1Q9C0I3 900 aa27.86■■■□□ 2.05
PERM1-203ENST00000479361 ATP6V0A4Q9HBG4 840 aa27.86■■■□□ 2.05
PERM1-203ENST00000479361 NBNO60934 754 aa27.85■■■□□ 2.05
PERM1-203ENST00000479361 CXCL10P02778 98 aa27.85■■■□□ 2.05
PERM1-203ENST00000479361 VTNP04004 478 aa27.85■■■□□ 2.05
PERM1-203ENST00000479361 ACRP10323 421 aa27.85■■■□□ 2.05
PERM1-203ENST00000479361 EPHB4P54760 987 aa27.85■■■□□ 2.05
PERM1-203ENST00000479361 MBTPS1Q14703 1052 aa27.85■■■□□ 2.05
PERM1-203ENST00000479361 PRO3102Q9H379 93 aa27.85■■■□□ 2.05
PERM1-203ENST00000479361 TSHZ2Q9NRE2 1034 aa27.85■■■□□ 2.05
PERM1-203ENST00000479361 SUCLA2Q9P2R7 463 aaPredicted RBP27.85■■■□□ 2.05
PERM1-203ENST00000479361 EYA4O95677 639 aa27.84■■■□□ 2.05
PERM1-203ENST00000479361 USP38Q8NB14 1042 aa27.84■■■□□ 2.05
PERM1-203ENST00000479361 PSPC1Q8WXF1 523 aaKnown RBP27.84■■■□□ 2.05
PERM1-203ENST00000479361 BHMT2Q9H2M3 363 aa27.84■■■□□ 2.05
PERM1-203ENST00000479361 RCOR1Q9UKL0 485 aa27.84■■■□□ 2.05
PERM1-203ENST00000479361 SQORQ9Y6N5 450 aa27.84■■■□□ 2.05
PERM1-203ENST00000479361 CUTAO60888 179 aa27.83■■■□□ 2.05
PERM1-203ENST00000479361 FGBP02675 491 aa27.83■■■□□ 2.05
PERM1-203ENST00000479361 ACTN1P12814 892 aa27.83■■■□□ 2.05
PERM1-203ENST00000479361 ME1P48163 572 aa27.83■■■□□ 2.05
PERM1-203ENST00000479361 GRB10Q13322 594 aa27.83■■■□□ 2.05
PERM1-203ENST00000479361 MKRN4PQ13434 485 aaPredicted RBP27.83■■■□□ 2.05
PERM1-203ENST00000479361 GPNMBQ14956 572 aa27.83■■■□□ 2.05
PERM1-203ENST00000479361 TMEM119Q4V9L6 283 aa27.83■■■□□ 2.05
PERM1-203ENST00000479361 SPECC1Q5M775 1068 aa27.83■■■□□ 2.05
PERM1-203ENST00000479361 TMEM240Q5SV17 173 aa27.83■■■□□ 2.05
PERM1-203ENST00000479361 ZNF365Q70YC5 407 aa27.83■■■□□ 2.05
PERM1-203ENST00000479361 C16orf59Q7L2K0 433 aa27.83■■■□□ 2.05
PERM1-203ENST00000479361 MCPH1Q8NEM0 835 aa27.83■■■□□ 2.05
PERM1-203ENST00000479361 SYMPKQ92797 1274 aaKnown RBP27.83■■■□□ 2.05
PERM1-203ENST00000479361 EPSTI1Q96J88 318 aa27.83■■■□□ 2.05
PERM1-203ENST00000479361 PNMA5Q96PV4 448 aa27.83■■■□□ 2.05
PERM1-203ENST00000479361 MTIF3Q9H2K0 278 aaKnown RBP27.83■■■□□ 2.05
PERM1-203ENST00000479361 BMP2KQ9NSY1 1161 aaPredicted RBP27.83■■■□□ 2.05
PERM1-203ENST00000479361 CCDC39Q9UFE4 941 aa27.83■■■□□ 2.05
PERM1-203ENST00000479361 COLQQ9Y215 455 aaPredicted RBP27.83■■■□□ 2.05
PERM1-203ENST00000479361 GINS2Q9Y248 185 aa27.83■■■□□ 2.05
PERM1-203ENST00000479361 EVPLQ92817 2033 aa27.82■■■□□ 2.04
PERM1-203ENST00000479361 A0A1W2PPC1 479 aa27.82■■■□□ 2.04
PERM1-203ENST00000479361 E9PMD0 336 aa27.82■■■□□ 2.04
PERM1-203ENST00000479361 USO1O60763 962 aaKnown RBP27.82■■■□□ 2.04
PERM1-203ENST00000479361 CRYBB1P53674 252 aaPredicted RBP27.82■■■□□ 2.04
PERM1-203ENST00000479361 NLRP11P59045 1033 aaKnown RBP27.82■■■□□ 2.04
PERM1-203ENST00000479361 DRP2Q13474 957 aa27.82■■■□□ 2.04
PERM1-203ENST00000479361 KIZQ2M2Z5 673 aa27.82■■■□□ 2.04
PERM1-203ENST00000479361 FBXO47Q5MNV8 452 aa27.82■■■□□ 2.04
PERM1-203ENST00000479361 PADI6Q6TGC4 694 aa27.82■■■□□ 2.04
PERM1-203ENST00000479361 TDHQ8IZJ6 230 aa27.82■■■□□ 2.04
PERM1-203ENST00000479361 SCLT1Q96NL6 688 aa27.82■■■□□ 2.04
PERM1-203ENST00000479361 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.82■■■□□ 2.04
PERM1-203ENST00000479361 SCAND2PQ9GZW5 306 aaPredicted RBP27.82■■■□□ 2.04
PERM1-203ENST00000479361 ARID2Q68CP9 1835 aa27.82■■■□□ 2.04
PERM1-203ENST00000479361 GPR32O75388 356 aa27.81■■■□□ 2.04
PERM1-203ENST00000479361 GHRP10912 638 aa27.81■■■□□ 2.04
PERM1-203ENST00000479361 KARSQ15046 597 aaKnown RBP27.81■■■□□ 2.04
PERM1-203ENST00000479361 CNKSR3Q6P9H4 555 aa27.81■■■□□ 2.04
PERM1-203ENST00000479361 TSHZ1Q6ZSZ6 1077 aa27.81■■■□□ 2.04
PERM1-203ENST00000479361 RHPN2Q8IUC4 686 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms