RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 NFKB1P19838 968 aa7.54□□□□□ -1.2
USP48-208ENST00000479177 BRD2P25440 801 aaKnown RBP7.54□□□□□ -1.2
USP48-208ENST00000479177 TARSP26639 723 aaKnown RBP7.54□□□□□ -1.2
USP48-208ENST00000479177 COPB2P35606 906 aa7.54□□□□□ -1.2
USP48-208ENST00000479177 UBE2HP62256 183 aa7.54□□□□□ -1.2
USP48-208ENST00000479177 ARHGAP4P98171 946 aa7.54□□□□□ -1.2
USP48-208ENST00000479177 ATP2C1P98194 919 aaPredicted RBP7.54□□□□□ -1.2
USP48-208ENST00000479177 PLS1Q14651 629 aa7.54□□□□□ -1.2
USP48-208ENST00000479177 ZNF174Q15697 407 aa7.54□□□□□ -1.2
USP48-208ENST00000479177 AXDND1Q5T1B0 1012 aaPredicted RBP7.54□□□□□ -1.2
USP48-208ENST00000479177 JMYQ8N9B5 988 aa7.54□□□□□ -1.2
USP48-208ENST00000479177 CHST13Q8NET6 341 aa7.54□□□□□ -1.2
USP48-208ENST00000479177 SYTL5Q8TDW5 730 aaPredicted RBP7.54□□□□□ -1.2
USP48-208ENST00000479177 PARK7Q99497 189 aaKnown RBP7.54□□□□□ -1.2
USP48-208ENST00000479177 PAGR1Q9BTK6 254 aa7.54□□□□□ -1.2
USP48-208ENST00000479177 PLVAPQ9BX97 442 aa7.54□□□□□ -1.2
USP48-208ENST00000479177 MOV10L1Q9BXT6 1211 aaKnown RBP7.54□□□□□ -1.2
USP48-208ENST00000479177 MAF1Q9H063 256 aa7.54□□□□□ -1.2
USP48-208ENST00000479177 IGFLR1Q9H665 355 aa7.54□□□□□ -1.2
USP48-208ENST00000479177 ZCCHC17Q9NP64 241 aaKnown RBP7.54□□□□□ -1.2
USP48-208ENST00000479177 COL20A1Q9P218 1284 aa7.54□□□□□ -1.2
USP48-208ENST00000479177 STIM2Q9P246 746 aa7.54□□□□□ -1.2
USP48-208ENST00000479177 RBPJLQ9UBG7 517 aa7.54□□□□□ -1.2
USP48-208ENST00000479177 FBXO2Q9UK22 296 aaPredicted RBP7.54□□□□□ -1.2
USP48-208ENST00000479177 CEP131Q9UPN4 1083 aa7.54□□□□□ -1.2
USP48-208ENST00000479177 USTQ9Y2C2 406 aa7.54□□□□□ -1.2
USP48-208ENST00000479177 PLXNB2O15031 1838 aa7.54□□□□□ -1.2
USP48-208ENST00000479177 ZNF236Q9UL36 1845 aa7.54□□□□□ -1.2
USP48-208ENST00000479177 A0A1W2PQ27 194 aa7.53□□□□□ -1.2
USP48-208ENST00000479177 A0A1W2PQ64 194 aa7.53□□□□□ -1.2
USP48-208ENST00000479177 A0A1W2PQD8 194 aa7.53□□□□□ -1.2
USP48-208ENST00000479177 RASSF10A6NK89 507 aa7.53□□□□□ -1.2
USP48-208ENST00000479177 SLC37A4O43826 429 aa7.53□□□□□ -1.2
USP48-208ENST00000479177 NEMFO60524 1076 aa7.53□□□□□ -1.2
USP48-208ENST00000479177 SASH3O75995 380 aa7.53□□□□□ -1.2
USP48-208ENST00000479177 TDP2O95551 362 aa7.53□□□□□ -1.2
USP48-208ENST00000479177 SLC25A27O95847 323 aa7.53□□□□□ -1.2
USP48-208ENST00000479177 MBD3O95983 291 aa7.53□□□□□ -1.2
USP48-208ENST00000479177 GCFC2P16383 781 aaKnown RBP7.53□□□□□ -1.2
USP48-208ENST00000479177 MARCKSP29966 332 aaPredicted RBP7.53□□□□□ -1.2
USP48-208ENST00000479177 CIITAP33076 1130 aa7.53□□□□□ -1.2
USP48-208ENST00000479177 MCM7P33993 719 aa7.53□□□□□ -1.2
USP48-208ENST00000479177 ME1P48163 572 aa7.53□□□□□ -1.2
USP48-208ENST00000479177 GCLCP48506 637 aaPredicted RBP7.53□□□□□ -1.2
USP48-208ENST00000479177 RPS6P62753 249 aaKnown RBP7.53□□□□□ -1.2
USP48-208ENST00000479177 ERVK-24P63145 666 aa7.53□□□□□ -1.2
USP48-208ENST00000479177 TBC1D8BQ0IIM8 1120 aa7.53□□□□□ -1.2
USP48-208ENST00000479177 CCINQ13939 588 aa7.53□□□□□ -1.2
USP48-208ENST00000479177 TRIP4Q15650 581 aaPredicted RBP7.53□□□□□ -1.2
USP48-208ENST00000479177 LETM2Q2VYF4 491 aa7.53□□□□□ -1.2
USP48-208ENST00000479177 PPP4R3AQ6IN85 833 aa7.53□□□□□ -1.2
USP48-208ENST00000479177 MOXD1Q6UVY6 613 aa7.53□□□□□ -1.2
USP48-208ENST00000479177 NSMFQ6X4W1 530 aa7.53□□□□□ -1.2
USP48-208ENST00000479177 RNF207Q6ZRF8 634 aa7.53□□□□□ -1.2
USP48-208ENST00000479177 C4orf32Q8N8J7 132 aa7.53□□□□□ -1.2
USP48-208ENST00000479177 SHCBP1Q8NEM2 672 aa7.53□□□□□ -1.2
USP48-208ENST00000479177 GPT2Q8TD30 523 aa7.53□□□□□ -1.2
USP48-208ENST00000479177 SMCR8Q8TEV9 937 aaPredicted RBP7.53□□□□□ -1.2
USP48-208ENST00000479177 MBOAT7Q96N66 472 aa7.53□□□□□ -1.2
USP48-208ENST00000479177 NAP1L4Q99733 375 aaKnown RBP7.53□□□□□ -1.2
USP48-208ENST00000479177 TMEM60Q9H2L4 133 aa7.53□□□□□ -1.2
USP48-208ENST00000479177 EHMT1Q9H9B1 1298 aa7.53□□□□□ -1.2
USP48-208ENST00000479177 A1CFQ9NQ94 594 aaKnown RBP7.53□□□□□ -1.2
USP48-208ENST00000479177 MAP3K20Q9NYL2 800 aaKnown RBP7.53□□□□□ -1.2
USP48-208ENST00000479177 CYP39A1Q9NYL5 469 aa7.53□□□□□ -1.2
USP48-208ENST00000479177 MORF4L1Q9UBU8 362 aa7.53□□□□□ -1.2
USP48-208ENST00000479177 FBXO40Q9UH90 709 aa7.53□□□□□ -1.2
USP48-208ENST00000479177 PCDHA7Q9UN72 937 aa7.53□□□□□ -1.2
USP48-208ENST00000479177 KCNMB2Q9Y691 235 aa7.53□□□□□ -1.2
USP48-208ENST00000479177 MRVI1Q9Y6F6 885 aa7.53□□□□□ -1.2
USP48-208ENST00000479177 PFASO15067 1338 aa7.52□□□□□ -1.2
USP48-208ENST00000479177 CYP3A7-CYP3A51PA0A087WV96 503 aa7.52□□□□□ -1.21
USP48-208ENST00000479177 LAD1O00515 517 aa7.52□□□□□ -1.21
USP48-208ENST00000479177 CCNT1O60563 726 aaKnown RBP7.52□□□□□ -1.21
USP48-208ENST00000479177 CUTAO60888 179 aa7.52□□□□□ -1.21
USP48-208ENST00000479177 CYP3A4P08684 503 aa7.52□□□□□ -1.21
USP48-208ENST00000479177 OR52Z1P0C646 297 aa7.52□□□□□ -1.21
USP48-208ENST00000479177 ERCC3P19447 782 aa7.52□□□□□ -1.21
USP48-208ENST00000479177 CYP3A7P24462 503 aa7.52□□□□□ -1.21
USP48-208ENST00000479177 ADH7P40394 386 aa7.52□□□□□ -1.21
USP48-208ENST00000479177 PRPHP41219 470 aa7.52□□□□□ -1.21
USP48-208ENST00000479177 USP11P51784 963 aa7.52□□□□□ -1.21
USP48-208ENST00000479177 GRIN1Q05586 938 aa7.52□□□□□ -1.21
USP48-208ENST00000479177 SREBF2Q12772 1141 aa7.52□□□□□ -1.21
USP48-208ENST00000479177 ZNF211Q13398 564 aaPredicted RBP7.52□□□□□ -1.21
USP48-208ENST00000479177 BAATQ14032 418 aaPredicted RBP7.52□□□□□ -1.21
USP48-208ENST00000479177 FAM110CQ1W6H9 321 aa7.52□□□□□ -1.21
USP48-208ENST00000479177 KLHL40Q2TBA0 621 aa7.52□□□□□ -1.21
USP48-208ENST00000479177 CYP4F22Q6NT55 531 aa7.52□□□□□ -1.21
USP48-208ENST00000479177 IL31RAQ8NI17 732 aa7.52□□□□□ -1.21
USP48-208ENST00000479177 HELQQ8TDG4 1101 aa7.52□□□□□ -1.21
USP48-208ENST00000479177 GPR152Q8TDT2 470 aa7.52□□□□□ -1.21
USP48-208ENST00000479177 FERMT2Q96AC1 680 aa7.52□□□□□ -1.21
USP48-208ENST00000479177 LENG9Q96B70 501 aa7.52□□□□□ -1.21
USP48-208ENST00000479177 R3HDMLQ9H3Y0 253 aa7.52□□□□□ -1.21
USP48-208ENST00000479177 GOLPH3LQ9H4A5 285 aa7.52□□□□□ -1.21
USP48-208ENST00000479177 TPSG1Q9NRR2 321 aa7.52□□□□□ -1.21
USP48-208ENST00000479177 STARD13Q9Y3M8 1113 aa7.52□□□□□ -1.21
USP48-208ENST00000479177 SRPRBQ9Y5M8 271 aaKnown RBP7.52□□□□□ -1.21
USP48-208ENST00000479177 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms