RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 ITGA4P13612 1032 aa12□□□□□ -0.49
LRRFIP1-211ENST00000478958 HSD17B3P37058 310 aa12□□□□□ -0.49
LRRFIP1-211ENST00000478958 KCNH2Q12809 1159 aa12□□□□□ -0.49
LRRFIP1-211ENST00000478958 SPRED3Q2MJR0 410 aa12□□□□□ -0.49
LRRFIP1-211ENST00000478958 GPBP1Q86WP2 473 aa12□□□□□ -0.49
LRRFIP1-211ENST00000478958 WDR66Q8TBY9 1149 aa12□□□□□ -0.49
LRRFIP1-211ENST00000478958 TEKT4Q8WW24 435 aa12□□□□□ -0.49
LRRFIP1-211ENST00000478958 DTNBP1Q96EV8 351 aa12□□□□□ -0.49
LRRFIP1-211ENST00000478958 PHACTR1Q9C0D0 580 aa12□□□□□ -0.49
LRRFIP1-211ENST00000478958 NEUROG2Q9H2A3 272 aa12□□□□□ -0.49
LRRFIP1-211ENST00000478958 LRRD1A4D1F6 860 aa11.99□□□□□ -0.49
LRRFIP1-211ENST00000478958 MEIS1O00470 390 aa11.99□□□□□ -0.49
LRRFIP1-211ENST00000478958 SART1O43290 800 aaKnown RBP11.99□□□□□ -0.49
LRRFIP1-211ENST00000478958 CREB3O43889 395 aa11.99□□□□□ -0.49
LRRFIP1-211ENST00000478958 NR2F2P24468 414 aa11.99□□□□□ -0.49
LRRFIP1-211ENST00000478958 FXR2P51116 673 aaKnown RBP eCLIP11.99□□□□□ -0.49
LRRFIP1-211ENST00000478958 PRPF4BQ13523 1007 aaKnown RBP11.99□□□□□ -0.49
LRRFIP1-211ENST00000478958 TTBK2Q6IQ55 1244 aa11.99□□□□□ -0.49
LRRFIP1-211ENST00000478958 PTF1AQ7RTS3 328 aa11.99□□□□□ -0.49
LRRFIP1-211ENST00000478958 RUBCNQ92622 972 aa11.99□□□□□ -0.49
LRRFIP1-211ENST00000478958 CELF4Q9BZC1 486 aaKnown RBP11.99□□□□□ -0.49
LRRFIP1-211ENST00000478958 TAF1DQ9H5J8 278 aaPredicted RBP11.99□□□□□ -0.49
LRRFIP1-211ENST00000478958 ZNF287Q9HBT7 754 aa11.99□□□□□ -0.49
LRRFIP1-211ENST00000478958 NHSL1Q5SYE7 1610 aa11.99□□□□□ -0.49
LRRFIP1-211ENST00000478958 MYH14Q7Z406 1995 aaKnown RBP11.99□□□□□ -0.49
LRRFIP1-211ENST00000478958 DCDC2CA8MYV0 355 aa11.99□□□□□ -0.49
LRRFIP1-211ENST00000478958 F8W031 263 aaPredicted RBP11.99□□□□□ -0.49
LRRFIP1-211ENST00000478958 UPP2O95045 317 aa11.99□□□□□ -0.49
LRRFIP1-211ENST00000478958 TNFRSF8P28908 595 aa11.99□□□□□ -0.49
LRRFIP1-211ENST00000478958 ITGB3BPQ13352 177 aaPredicted RBP11.99□□□□□ -0.49
LRRFIP1-211ENST00000478958 ARMC9Q7Z3E5 817 aa11.99□□□□□ -0.49
LRRFIP1-211ENST00000478958 ZNF571Q7Z3V5 609 aaPredicted RBP11.99□□□□□ -0.49
LRRFIP1-211ENST00000478958 TAX1BP1Q86VP1 789 aa11.99□□□□□ -0.49
LRRFIP1-211ENST00000478958 ARL10Q8N8L6 244 aa11.99□□□□□ -0.49
LRRFIP1-211ENST00000478958 WHAMMQ8TF30 809 aa11.99□□□□□ -0.49
LRRFIP1-211ENST00000478958 CYFIP2Q96F07 1278 aa11.99□□□□□ -0.49
LRRFIP1-211ENST00000478958 EMILIN3Q9NT22 766 aa11.99□□□□□ -0.49
LRRFIP1-211ENST00000478958 RNF14Q9UBS8 474 aa11.99□□□□□ -0.49
LRRFIP1-211ENST00000478958 EIF4E1BA6NMX2 242 aaKnown RBP11.98□□□□□ -0.49
LRRFIP1-211ENST00000478958 USP17L15C9J2P7 530 aa11.98□□□□□ -0.49
LRRFIP1-211ENST00000478958 USP17L13C9JLJ4 530 aa11.98□□□□□ -0.49
LRRFIP1-211ENST00000478958 USP17L11C9JVI0 530 aa11.98□□□□□ -0.49
LRRFIP1-211ENST00000478958 USP17L18D6R9N7 530 aa11.98□□□□□ -0.49
LRRFIP1-211ENST00000478958 USP17L22D6RA61 530 aa11.98□□□□□ -0.49
LRRFIP1-211ENST00000478958 USP17L17D6RBQ6 530 aa11.98□□□□□ -0.49
LRRFIP1-211ENST00000478958 USP17L19D6RCP7 530 aa11.98□□□□□ -0.49
LRRFIP1-211ENST00000478958 USP17L20D6RJB6 530 aa11.98□□□□□ -0.49
LRRFIP1-211ENST00000478958 KRIT1O00522 736 aa11.98□□□□□ -0.49
LRRFIP1-211ENST00000478958 DAPK3O43293 454 aa11.98□□□□□ -0.49
LRRFIP1-211ENST00000478958 COPB2P35606 906 aa11.98□□□□□ -0.49
LRRFIP1-211ENST00000478958 CASP5P51878 434 aa11.98□□□□□ -0.49
LRRFIP1-211ENST00000478958 USP17L24Q0WX57 530 aa11.98□□□□□ -0.49
LRRFIP1-211ENST00000478958 CCDC38Q502W7 563 aa11.98□□□□□ -0.49
LRRFIP1-211ENST00000478958 ZCWPW2Q504Y3 356 aa11.98□□□□□ -0.49
LRRFIP1-211ENST00000478958 COBLL1Q53SF7 1204 aa11.98□□□□□ -0.49
LRRFIP1-211ENST00000478958 GJB7Q6PEY0 223 aa11.98□□□□□ -0.49
LRRFIP1-211ENST00000478958 USP17L6PQ6QN14 398 aa11.98□□□□□ -0.49
LRRFIP1-211ENST00000478958 NEDD1Q8NHV4 660 aa11.98□□□□□ -0.49
LRRFIP1-211ENST00000478958 SCFD1Q8WVM8 642 aa11.98□□□□□ -0.49
LRRFIP1-211ENST00000478958 HAS1Q92839 578 aa11.98□□□□□ -0.49
LRRFIP1-211ENST00000478958 SLC5A4Q9NY91 659 aa11.98□□□□□ -0.49
LRRFIP1-211ENST00000478958 FBXL5Q9UKA1 691 aa11.98□□□□□ -0.49
LRRFIP1-211ENST00000478958 RBAK-RBAKDNI3L0D1 243 aa11.98□□□□□ -0.49
LRRFIP1-211ENST00000478958 DNAJC8O75937 253 aaPredicted RBP11.98□□□□□ -0.49
LRRFIP1-211ENST00000478958 UAP1Q16222 522 aaPredicted RBP11.98□□□□□ -0.49
LRRFIP1-211ENST00000478958 NUGGCQ68CJ6 796 aa11.98□□□□□ -0.49
LRRFIP1-211ENST00000478958 ALKBH5Q6P6C2 394 aaKnown RBP11.98□□□□□ -0.49
LRRFIP1-211ENST00000478958 TPTE2Q6XPS3 522 aa11.98□□□□□ -0.49
LRRFIP1-211ENST00000478958 KCTD1Q719H9 257 aa11.98□□□□□ -0.49
LRRFIP1-211ENST00000478958 TRIM59Q8IWR1 403 aa11.98□□□□□ -0.49
LRRFIP1-211ENST00000478958 BCAS3Q9H6U6 928 aa11.98□□□□□ -0.49
LRRFIP1-211ENST00000478958 LRRC4CQ9HCJ2 640 aa11.98□□□□□ -0.49
LRRFIP1-211ENST00000478958 NOVA2Q9UNW9 492 aaKnown RBP11.98□□□□□ -0.49
LRRFIP1-211ENST00000478958 CASZ1Q86V15 1759 aa11.98□□□□□ -0.49
LRRFIP1-211ENST00000478958 POTEFA5A3E0 1075 aa11.97□□□□□ -0.49
LRRFIP1-211ENST00000478958 SMIM23A6NLE4 172 aa11.97□□□□□ -0.49
LRRFIP1-211ENST00000478958 CLTAP09496 248 aa11.97□□□□□ -0.49
LRRFIP1-211ENST00000478958 PLA2G4BP0C869 781 aa11.97□□□□□ -0.49
LRRFIP1-211ENST00000478958 POTEIP0CG38 1075 aa11.97□□□□□ -0.49
LRRFIP1-211ENST00000478958 POTEGQ6S5H5 508 aa11.97□□□□□ -0.49
LRRFIP1-211ENST00000478958 POTEEQ6S8J3 1075 aa11.97□□□□□ -0.49
LRRFIP1-211ENST00000478958 PNMA8AQ86V59 439 aaPredicted RBP11.97□□□□□ -0.49
LRRFIP1-211ENST00000478958 PROM2Q8N271 834 aa11.97□□□□□ -0.49
LRRFIP1-211ENST00000478958 METTL13Q8N6R0 699 aa11.97□□□□□ -0.49
LRRFIP1-211ENST00000478958 RTFDC1Q9BY42 306 aaPredicted RBP11.97□□□□□ -0.49
LRRFIP1-211ENST00000478958 NOC2LQ9Y3T9 749 aaKnown RBP11.97□□□□□ -0.49
LRRFIP1-211ENST00000478958 ABCB11O95342 1321 aa11.97□□□□□ -0.49
LRRFIP1-211ENST00000478958 HMGB1P1B2RPK0 211 aaPredicted RBP11.97□□□□□ -0.49
LRRFIP1-211ENST00000478958 GNPATO15228 680 aa11.97□□□□□ -0.49
LRRFIP1-211ENST00000478958 TTI1O43156 1089 aa11.97□□□□□ -0.49
LRRFIP1-211ENST00000478958 GSTO1P78417 241 aa11.97□□□□□ -0.49
LRRFIP1-211ENST00000478958 MYBPC3Q14896 1274 aa11.97□□□□□ -0.49
LRRFIP1-211ENST00000478958 QPCTQ16769 361 aa11.97□□□□□ -0.49
LRRFIP1-211ENST00000478958 C16orf86Q6ZW13 317 aa11.97□□□□□ -0.49
LRRFIP1-211ENST00000478958 PEX26Q7Z412 305 aa11.97□□□□□ -0.49
LRRFIP1-211ENST00000478958 CCDC65Q8IXS2 484 aa11.97□□□□□ -0.49
LRRFIP1-211ENST00000478958 HVCN1Q96D96 273 aa11.97□□□□□ -0.49
LRRFIP1-211ENST00000478958 HDAC9Q9UKV0 1011 aa11.97□□□□□ -0.49
LRRFIP1-211ENST00000478958 C2CD2Q9Y426 696 aa11.97□□□□□ -0.49
LRRFIP1-211ENST00000478958 DPPA5A6NC42 116 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms