RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 ELMO3Q96BJ8 720 aa11.81□□□□□ -0.52
VPS52-217ENST00000478934 BORCS6Q96GS4 357 aa11.81□□□□□ -0.52
VPS52-217ENST00000478934 ZBTB21Q9ULJ3 1066 aa11.81□□□□□ -0.52
VPS52-217ENST00000478934 SHTN1A0MZ66 631 aa11.8□□□□□ -0.52
VPS52-217ENST00000478934 GCOM1H8Y6P7 765 aaPredicted RBP11.8□□□□□ -0.52
VPS52-217ENST00000478934 RAD51CO43502 376 aa11.8□□□□□ -0.52
VPS52-217ENST00000478934 GAS7O60861 476 aa11.8□□□□□ -0.52
VPS52-217ENST00000478934 ENTPD3O75355 529 aa11.8□□□□□ -0.52
VPS52-217ENST00000478934 CYP3A4P08684 503 aa11.8□□□□□ -0.52
VPS52-217ENST00000478934 POLR2MP0CAP2 368 aa11.8□□□□□ -0.52
VPS52-217ENST00000478934 EPB41P11171 864 aaKnown RBP11.8□□□□□ -0.52
VPS52-217ENST00000478934 IRAK1P51617 712 aa11.8□□□□□ -0.52
VPS52-217ENST00000478934 GNGT1P63211 74 aa11.8□□□□□ -0.52
VPS52-217ENST00000478934 PDCLQ13371 301 aa11.8□□□□□ -0.52
VPS52-217ENST00000478934 GBP6Q6ZN66 633 aa11.8□□□□□ -0.52
VPS52-217ENST00000478934 PALB2Q86YC2 1186 aa11.8□□□□□ -0.52
VPS52-217ENST00000478934 GLYCTKQ8IVS8 523 aa11.8□□□□□ -0.52
VPS52-217ENST00000478934 FAM186BQ8IYM0 893 aa11.8□□□□□ -0.52
VPS52-217ENST00000478934 IL31RAQ8NI17 732 aa11.8□□□□□ -0.52
VPS52-217ENST00000478934 OLIG1Q8TAK6 271 aa11.8□□□□□ -0.52
VPS52-217ENST00000478934 PCIF1Q9H4Z3 704 aa11.8□□□□□ -0.52
VPS52-217ENST00000478934 OSGEPQ9NPF4 335 aa11.8□□□□□ -0.52
VPS52-217ENST00000478934 ZNF277Q9NRM2 450 aaPredicted RBP11.8□□□□□ -0.52
VPS52-217ENST00000478934 COL20A1Q9P218 1284 aa11.8□□□□□ -0.52
VPS52-217ENST00000478934 CHORDC1Q9UHD1 332 aaPredicted RBP11.8□□□□□ -0.52
VPS52-217ENST00000478934 SPDYE2BA6NHP3 402 aa11.8□□□□□ -0.52
VPS52-217ENST00000478934 CEP104O60308 925 aa11.8□□□□□ -0.52
VPS52-217ENST00000478934 SPDYE6P0CI01 402 aa11.8□□□□□ -0.52
VPS52-217ENST00000478934 ITGA4P13612 1032 aa11.8□□□□□ -0.52
VPS52-217ENST00000478934 EPHB4P54760 987 aa11.8□□□□□ -0.52
VPS52-217ENST00000478934 DLG4P78352 724 aa11.8□□□□□ -0.52
VPS52-217ENST00000478934 ITIH3Q06033 890 aa11.8□□□□□ -0.52
VPS52-217ENST00000478934 BMT2Q1RMZ1 405 aa11.8□□□□□ -0.52
VPS52-217ENST00000478934 LNX1Q8TBB1 728 aaPredicted RBP11.8□□□□□ -0.52
VPS52-217ENST00000478934 RUFY1Q96T51 708 aa11.8□□□□□ -0.52
VPS52-217ENST00000478934 ZNF577Q9BSK1 485 aa11.8□□□□□ -0.52
VPS52-217ENST00000478934 CENPHQ9H3R5 247 aa11.8□□□□□ -0.52
VPS52-217ENST00000478934 PLCB1Q9NQ66 1216 aa11.8□□□□□ -0.52
VPS52-217ENST00000478934 TAS2R14Q9NYV8 317 aa11.8□□□□□ -0.52
VPS52-217ENST00000478934 ZNF70Q9UC06 446 aaPredicted RBP11.8□□□□□ -0.52
VPS52-217ENST00000478934 TMX2Q9Y320 296 aa11.8□□□□□ -0.52
VPS52-217ENST00000478934 ATRNL1Q5VV63 1379 aa11.8□□□□□ -0.52
VPS52-217ENST00000478934 PIK3CDO00329 1044 aa11.79□□□□□ -0.52
VPS52-217ENST00000478934 EVI5O60447 810 aa11.79□□□□□ -0.52
VPS52-217ENST00000478934 ABCB4P21439 1286 aa11.79□□□□□ -0.52
VPS52-217ENST00000478934 JAM2P57087 298 aa11.79□□□□□ -0.52
VPS52-217ENST00000478934 RPS6KA1Q15418 735 aa11.79□□□□□ -0.52
VPS52-217ENST00000478934 ARHGAP44Q17R89 818 aa11.79□□□□□ -0.52
VPS52-217ENST00000478934 GRIPAP1Q4V328 841 aa11.79□□□□□ -0.52
VPS52-217ENST00000478934 CEP55Q53EZ4 464 aa11.79□□□□□ -0.52
VPS52-217ENST00000478934 ODR4Q5SWX8 454 aa11.79□□□□□ -0.52
VPS52-217ENST00000478934 LRRC57Q8N9N7 239 aa11.79□□□□□ -0.52
VPS52-217ENST00000478934 SLC5A5Q92911 643 aa11.79□□□□□ -0.52
VPS52-217ENST00000478934 HOMER2Q9NSB8 354 aa11.79□□□□□ -0.52
VPS52-217ENST00000478934 IGSF9BQ9UPX0 1349 aa11.79□□□□□ -0.52
VPS52-217ENST00000478934 ZEB2O60315 1214 aa11.79□□□□□ -0.52
VPS52-217ENST00000478934 HSF2BPO75031 334 aa11.79□□□□□ -0.52
VPS52-217ENST00000478934 KIF4AO95239 1232 aa11.79□□□□□ -0.52
VPS52-217ENST00000478934 ITGB5P18084 799 aa11.79□□□□□ -0.52
VPS52-217ENST00000478934 INPP5BP32019 993 aa11.79□□□□□ -0.52
VPS52-217ENST00000478934 COPB2P35606 906 aa11.79□□□□□ -0.52
VPS52-217ENST00000478934 STYK1Q6J9G0 422 aa11.79□□□□□ -0.52
VPS52-217ENST00000478934 ZNF720Q7Z2F6 126 aa11.79□□□□□ -0.52
VPS52-217ENST00000478934 LDHDQ86WU2 507 aa11.79□□□□□ -0.52
VPS52-217ENST00000478934 DAW1Q8N136 415 aa11.79□□□□□ -0.52
VPS52-217ENST00000478934 METTL13Q8N6R0 699 aa11.79□□□□□ -0.52
VPS52-217ENST00000478934 USP38Q8NB14 1042 aa11.79□□□□□ -0.52
VPS52-217ENST00000478934 OR2W6PQ8NHA6 318 aa11.79□□□□□ -0.52
VPS52-217ENST00000478934 BCAS4Q8TDM0 211 aa11.79□□□□□ -0.52
VPS52-217ENST00000478934 HOOK2Q96ED9 719 aa11.79□□□□□ -0.52
VPS52-217ENST00000478934 LXNQ9BS40 222 aa11.79□□□□□ -0.52
VPS52-217ENST00000478934 CAPS2Q9BXY5 557 aa11.79□□□□□ -0.52
VPS52-217ENST00000478934 WDR11Q9BZH6 1224 aa11.79□□□□□ -0.52
VPS52-217ENST00000478934 PARVGQ9HBI0 331 aa11.79□□□□□ -0.52
VPS52-217ENST00000478934 CNTNAP1P78357 1384 aa11.79□□□□□ -0.52
VPS52-217ENST00000478934 NFIBO00712 420 aa11.78□□□□□ -0.52
VPS52-217ENST00000478934 PLSCR1O15162 318 aa11.78□□□□□ -0.52
VPS52-217ENST00000478934 PPFIA4O75335 1185 aa11.78□□□□□ -0.52
VPS52-217ENST00000478934 RPS6KA5O75582 802 aa11.78□□□□□ -0.52
VPS52-217ENST00000478934 RPL13P26373 211 aaKnown RBP11.78□□□□□ -0.52
VPS52-217ENST00000478934 PRELPP51888 382 aa11.78□□□□□ -0.52
VPS52-217ENST00000478934 FKBP1AP62942 108 aaKnown RBP11.78□□□□□ -0.52
VPS52-217ENST00000478934 DRAP1Q14919 205 aaPredicted RBP11.78□□□□□ -0.52
VPS52-217ENST00000478934 NAA35Q5VZE5 725 aa11.78□□□□□ -0.52
VPS52-217ENST00000478934 ADAT2Q7Z6V5 191 aaKnown RBP11.78□□□□□ -0.52
VPS52-217ENST00000478934 FAM178BQ8IXR5 827 aa11.78□□□□□ -0.52
VPS52-217ENST00000478934 TPCN2Q8NHX9 752 aa11.78□□□□□ -0.52
VPS52-217ENST00000478934 DDX47Q9H0S4 455 aaKnown RBP11.78□□□□□ -0.52
VPS52-217ENST00000478934 ARHGEF10LQ9HCE6 1279 aa11.78□□□□□ -0.52
VPS52-217ENST00000478934 GDF3Q9NR23 364 aa11.78□□□□□ -0.52
VPS52-217ENST00000478934 OLFML3Q9NRN5 406 aa11.78□□□□□ -0.52
VPS52-217ENST00000478934 AGPAT3Q9NRZ7 376 aa11.78□□□□□ -0.52
VPS52-217ENST00000478934 DNAJC12Q9UKB3 198 aa11.78□□□□□ -0.52
VPS52-217ENST00000478934 NR2E1Q9Y466 385 aa11.78□□□□□ -0.52
VPS52-217ENST00000478934 GRIN2DO15399 1336 aa11.78□□□□□ -0.52
VPS52-217ENST00000478934 ZNF233A6NK53 670 aa11.78□□□□□ -0.52
VPS52-217ENST00000478934 HIP1RO75146 1068 aa11.78□□□□□ -0.52
VPS52-217ENST00000478934 FMO5P49326 533 aa11.78□□□□□ -0.52
VPS52-217ENST00000478934 GALCP54803 685 aa11.78□□□□□ -0.52
VPS52-217ENST00000478934 HLTFQ14527 1009 aaKnown RBP eCLIP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms