RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 GABBR1Q9UBS5 961 aa15.01□□□□□ -0.01
VCL-205ENST00000478896 MUTYHQ9UIF7 546 aa15.01□□□□□ -0.01
VCL-205ENST00000478896 BARX2Q9UMQ3 279 aaPredicted RBP15.01□□□□□ -0.01
VCL-205ENST00000478896 AKT3Q9Y243 479 aa15.01□□□□□ -0.01
VCL-205ENST00000478896 PCDHA10Q9Y5I2 948 aa15.01□□□□□ -0.01
VCL-205ENST00000478896 ZBTB42B2RXF5 422 aa15□□□□□ -0.01
VCL-205ENST00000478896 C9IYK1 514 aa15□□□□□ -0.01
VCL-205ENST00000478896 ATP4AP20648 1035 aa15□□□□□ -0.01
VCL-205ENST00000478896 CLCN3P51790 818 aa15□□□□□ -0.01
VCL-205ENST00000478896 UBE3AQ05086 875 aa15□□□□□ -0.01
VCL-205ENST00000478896 FAM102BQ5T8I3 360 aa15□□□□□ -0.01
VCL-205ENST00000478896 BICD2Q8TD16 824 aa15□□□□□ -0.01
VCL-205ENST00000478896 RASGRP4Q8TDF6 673 aa15□□□□□ -0.01
VCL-205ENST00000478896 CRYGNQ8WXF5 182 aa15□□□□□ -0.01
VCL-205ENST00000478896 MSLNLQ96KJ4 702 aa15□□□□□ -0.01
VCL-205ENST00000478896 FAM167AQ96KS9 214 aa15□□□□□ -0.01
VCL-205ENST00000478896 TLE6Q9H808 572 aa15□□□□□ -0.01
VCL-205ENST00000478896 ATP6V0A4Q9HBG4 840 aa15□□□□□ -0.01
VCL-205ENST00000478896 PCDHGC5Q9Y5F6 944 aa15□□□□□ -0.01
VCL-205ENST00000478896 MAFBQ9Y5Q3 323 aaPredicted RBP15□□□□□ -0.01
VCL-205ENST00000478896 MAGEB2O15479 319 aa14.99□□□□□ -0.01
VCL-205ENST00000478896 PRPF3O43395 683 aaKnown RBP14.99□□□□□ -0.01
VCL-205ENST00000478896 FGF18O76093 207 aa14.99□□□□□ -0.01
VCL-205ENST00000478896 EYA4O95677 639 aa14.99□□□□□ -0.01
VCL-205ENST00000478896 FGFR1P11362 822 aa14.99□□□□□ -0.01
VCL-205ENST00000478896 ZSCAN20P17040 1043 aaPredicted RBP14.99□□□□□ -0.01
VCL-205ENST00000478896 LAG3P18627 525 aa14.99□□□□□ -0.01
VCL-205ENST00000478896 TMOD1P28289 359 aa14.99□□□□□ -0.01
VCL-205ENST00000478896 RNF135Q8IUD6 432 aa14.99□□□□□ -0.01
VCL-205ENST00000478896 ABI1Q8IZP0 508 aa14.99□□□□□ -0.01
VCL-205ENST00000478896 COLGALT1Q8NBJ5 622 aa14.99□□□□□ -0.01
VCL-205ENST00000478896 SMRP1Q8NCR6 262 aa14.99□□□□□ -0.01
VCL-205ENST00000478896 PHKBQ93100 1093 aa14.99□□□□□ -0.01
VCL-205ENST00000478896 SCLT1Q96NL6 688 aa14.99□□□□□ -0.01
VCL-205ENST00000478896 TYW1Q9NV66 732 aaKnown RBP14.99□□□□□ -0.01
VCL-205ENST00000478896 TMEM161AQ9NX61 479 aa14.99□□□□□ -0.01
VCL-205ENST00000478896 CLEC1BQ9P126 229 aa14.99□□□□□ -0.01
VCL-205ENST00000478896 HCSTQ9UBK5 93 aa14.99□□□□□ -0.01
VCL-205ENST00000478896 NID2Q14112 1375 aa14.98□□□□□ -0.01
VCL-205ENST00000478896 FSD2A1L4K1 749 aa14.98□□□□□ -0.01
VCL-205ENST00000478896 WDR64B1ANS9 1081 aa14.98□□□□□ -0.01
VCL-205ENST00000478896 PER2O15055 1255 aa14.98□□□□□ -0.01
VCL-205ENST00000478896 ADAMTS3O15072 1205 aa14.98□□□□□ -0.01
VCL-205ENST00000478896 CHMP2AO43633 222 aa14.98□□□□□ -0.01
VCL-205ENST00000478896 GPR32O75388 356 aa14.98□□□□□ -0.01
VCL-205ENST00000478896 GLP2RO95838 553 aa14.98□□□□□ -0.01
VCL-205ENST00000478896 SRGAP2BP0DMP2 458 aa14.98□□□□□ -0.01
VCL-205ENST00000478896 NLRP11P59045 1033 aaKnown RBP14.98□□□□□ -0.01
VCL-205ENST00000478896 COASYQ13057 564 aa14.98□□□□□ -0.01
VCL-205ENST00000478896 PKN1Q16512 942 aa14.98□□□□□ -0.01
VCL-205ENST00000478896 EFCAB12Q6NXP0 572 aa14.98□□□□□ -0.01
VCL-205ENST00000478896 SLC26A6Q9BXS9 759 aa14.98□□□□□ -0.01
VCL-205ENST00000478896 RNF26Q9BY78 433 aaPredicted RBP14.98□□□□□ -0.01
VCL-205ENST00000478896 ELAC1Q9H777 363 aaKnown RBP14.98□□□□□ -0.01
VCL-205ENST00000478896 VPS54Q9P1Q0 977 aa14.98□□□□□ -0.01
VCL-205ENST00000478896 HOXA2O43364 376 aa14.97□□□□□ -0.01
VCL-205ENST00000478896 OATP04181 439 aa14.97□□□□□ -0.01
VCL-205ENST00000478896 HSPA4P34932 840 aa14.97□□□□□ -0.01
VCL-205ENST00000478896 HERC4Q5GLZ8 1057 aaPredicted RBP14.97□□□□□ -0.01
VCL-205ENST00000478896 PLPP4Q5VZY2 271 aa14.97□□□□□ -0.01
VCL-205ENST00000478896 HFE2Q6ZVN8 426 aa14.97□□□□□ -0.01
VCL-205ENST00000478896 LRRC43Q8N309 656 aa14.97□□□□□ -0.01
VCL-205ENST00000478896 LRRC71Q8N4P6 559 aa14.97□□□□□ -0.01
VCL-205ENST00000478896 RNF169Q8NCN4 708 aa14.97□□□□□ -0.01
VCL-205ENST00000478896 CDCA3Q99618 268 aaPredicted RBP14.97□□□□□ -0.01
VCL-205ENST00000478896 TEKT3Q9BXF9 490 aa14.97□□□□□ -0.01
VCL-205ENST00000478896 TMEM117Q9H0C3 514 aa14.97□□□□□ -0.01
VCL-205ENST00000478896 ENTPD7Q9NQZ7 604 aa14.97□□□□□ -0.01
VCL-205ENST00000478896 DISC1Q9NRI5 854 aa14.97□□□□□ -0.01
VCL-205ENST00000478896 USP15Q9Y4E8 981 aaPredicted RBP14.97□□□□□ -0.01
VCL-205ENST00000478896 SNX14Q9Y5W7 946 aa14.97□□□□□ -0.01
VCL-205ENST00000478896 GAS7O60861 476 aa14.96□□□□□ -0.01
VCL-205ENST00000478896 RPS6KB1P23443 525 aa14.96□□□□□ -0.01
VCL-205ENST00000478896 PSMA5P28066 241 aa14.96□□□□□ -0.01
VCL-205ENST00000478896 CIITAP33076 1130 aa14.96□□□□□ -0.01
VCL-205ENST00000478896 NLRP5P59047 1200 aa14.96□□□□□ -0.01
VCL-205ENST00000478896 CCT2P78371 535 aaKnown RBP14.96□□□□□ -0.01
VCL-205ENST00000478896 PRKCEQ02156 737 aa14.96□□□□□ -0.01
VCL-205ENST00000478896 DUSP6Q16828 381 aa14.96□□□□□ -0.01
VCL-205ENST00000478896 PDE12Q6L8Q7 609 aaKnown RBP14.96□□□□□ -0.01
VCL-205ENST00000478896 ALYREFQ86V81 257 aaKnown RBP14.96□□□□□ -0.01
VCL-205ENST00000478896 CCDC136Q96JN2 1154 aa14.96□□□□□ -0.01
VCL-205ENST00000478896 ZNF668Q96K58 619 aaPredicted RBP14.96□□□□□ -0.01
VCL-205ENST00000478896 MFSD14AQ96MC6 490 aa14.96□□□□□ -0.01
VCL-205ENST00000478896 TCF25Q9BQ70 676 aa14.96□□□□□ -0.01
VCL-205ENST00000478896 CWH43Q9H720 699 aa14.96□□□□□ -0.01
VCL-205ENST00000478896 NRBP2Q9NSY0 501 aa14.96□□□□□ -0.01
VCL-205ENST00000478896 PUF60Q9UHX1 559 aaKnown RBP14.96□□□□□ -0.01
VCL-205ENST00000478896 MSH4O15457 936 aa14.95□□□□□ -0.02
VCL-205ENST00000478896 SFNP31947 248 aa14.95□□□□□ -0.02
VCL-205ENST00000478896 PPM1AP35813 382 aa14.95□□□□□ -0.02
VCL-205ENST00000478896 JAK3P52333 1124 aa14.95□□□□□ -0.02
VCL-205ENST00000478896 ERVFC1P60507 584 aa14.95□□□□□ -0.02
VCL-205ENST00000478896 RBM10P98175 930 aaKnown RBP14.95□□□□□ -0.02
VCL-205ENST00000478896 TBC1D8BQ0IIM8 1120 aa14.95□□□□□ -0.02
VCL-205ENST00000478896 DSC3Q14574 896 aa14.95□□□□□ -0.02
VCL-205ENST00000478896 LRCH2Q5VUJ6 765 aa14.95□□□□□ -0.02
VCL-205ENST00000478896 TRIM22Q8IYM9 498 aa14.95□□□□□ -0.02
VCL-205ENST00000478896 ZNF710Q8N1W2 664 aa14.95□□□□□ -0.02
VCL-205ENST00000478896 NLRP7Q8WX94 980 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms