RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.35□□□□□ -0.91
ERCC8-205ENST00000477893 TMEM150BA6NC51 233 aa9.35□□□□□ -0.91
ERCC8-205ENST00000477893 M0R2N6 131 aa9.35□□□□□ -0.91
ERCC8-205ENST00000477893 MARCH6O60337 910 aa9.35□□□□□ -0.91
ERCC8-205ENST00000477893 HBP1O60381 514 aa9.35□□□□□ -0.91
ERCC8-205ENST00000477893 CCNT1O60563 726 aaKnown RBP9.35□□□□□ -0.91
ERCC8-205ENST00000477893 EIF5BO60841 1220 aaKnown RBP9.35□□□□□ -0.91
ERCC8-205ENST00000477893 CSPG5O95196 566 aa9.35□□□□□ -0.91
ERCC8-205ENST00000477893 ATG7O95352 703 aa9.35□□□□□ -0.91
ERCC8-205ENST00000477893 KLRC1P26715 233 aa9.35□□□□□ -0.91
ERCC8-205ENST00000477893 KRT2P35908 639 aa9.35□□□□□ -0.91
ERCC8-205ENST00000477893 SLC26A2P50443 739 aa9.35□□□□□ -0.91
ERCC8-205ENST00000477893 USP11P51784 963 aa9.35□□□□□ -0.91
ERCC8-205ENST00000477893 CLCN3P51790 818 aa9.35□□□□□ -0.91
ERCC8-205ENST00000477893 GUCY1B3Q02153 619 aa9.35□□□□□ -0.91
ERCC8-205ENST00000477893 PRKCEQ02156 737 aa9.35□□□□□ -0.91
ERCC8-205ENST00000477893 ST3GAL1Q11201 340 aa9.35□□□□□ -0.91
ERCC8-205ENST00000477893 PAK2Q13177 524 aa9.35□□□□□ -0.91
ERCC8-205ENST00000477893 NR5A1Q13285 461 aa9.35□□□□□ -0.91
ERCC8-205ENST00000477893 SKIV2LQ15477 1246 aaKnown RBP9.35□□□□□ -0.91
ERCC8-205ENST00000477893 EARS2Q5JPH6 523 aaKnown RBP9.35□□□□□ -0.91
ERCC8-205ENST00000477893 FAM26DQ5JW98 314 aa9.35□□□□□ -0.91
ERCC8-205ENST00000477893 FBXO47Q5MNV8 452 aa9.35□□□□□ -0.91
ERCC8-205ENST00000477893 MIER3Q7Z3K6 550 aa9.35□□□□□ -0.91
ERCC8-205ENST00000477893 SMAP1Q8IYB5 467 aaPredicted RBP9.35□□□□□ -0.91
ERCC8-205ENST00000477893 NSUN7Q8NE18 718 aaKnown RBP9.35□□□□□ -0.91
ERCC8-205ENST00000477893 WASF1Q92558 559 aa9.35□□□□□ -0.91
ERCC8-205ENST00000477893 SLC5A5Q92911 643 aa9.35□□□□□ -0.91
ERCC8-205ENST00000477893 TNPO1Q92973 898 aaKnown RBP9.35□□□□□ -0.91
ERCC8-205ENST00000477893 DDX27Q96GQ7 796 aaKnown RBP9.35□□□□□ -0.91
ERCC8-205ENST00000477893 ZNF668Q96K58 619 aaPredicted RBP9.35□□□□□ -0.91
ERCC8-205ENST00000477893 RAD9AQ99638 391 aa9.35□□□□□ -0.91
ERCC8-205ENST00000477893 SH2D3AQ9BRG2 576 aa9.35□□□□□ -0.91
ERCC8-205ENST00000477893 C22orf23Q9BZE7 217 aa9.35□□□□□ -0.91
ERCC8-205ENST00000477893 PCDHA2Q9Y5H9 948 aa9.35□□□□□ -0.91
ERCC8-205ENST00000477893 TRPV2Q9Y5S1 764 aa9.35□□□□□ -0.91
ERCC8-205ENST00000477893 SIP14410 1827 aa9.35□□□□□ -0.91
ERCC8-205ENST00000477893 IGSF9BQ9UPX0 1349 aa9.34□□□□□ -0.91
ERCC8-205ENST00000477893 ZBTB42B2RXF5 422 aa9.34□□□□□ -0.91
ERCC8-205ENST00000477893 C22orf31O95567 290 aa9.34□□□□□ -0.91
ERCC8-205ENST00000477893 VTNP04004 478 aa9.34□□□□□ -0.91
ERCC8-205ENST00000477893 OATP04181 439 aa9.34□□□□□ -0.91
ERCC8-205ENST00000477893 FDPSP14324 419 aaKnown RBP9.34□□□□□ -0.91
ERCC8-205ENST00000477893 JAK3P52333 1124 aa9.34□□□□□ -0.91
ERCC8-205ENST00000477893 TRIM29Q14134 588 aa9.34□□□□□ -0.91
ERCC8-205ENST00000477893 KIZQ2M2Z5 673 aa9.34□□□□□ -0.91
ERCC8-205ENST00000477893 Q4G0T1 1027 aa9.34□□□□□ -0.91
ERCC8-205ENST00000477893 TJAP1Q5JTD0 557 aa9.34□□□□□ -0.91
ERCC8-205ENST00000477893 ZNF484Q5JVG2 852 aa9.34□□□□□ -0.91
ERCC8-205ENST00000477893 C6orf132Q5T0Z8 1188 aa9.34□□□□□ -0.91
ERCC8-205ENST00000477893 IER5Q5VY09 327 aa9.34□□□□□ -0.91
ERCC8-205ENST00000477893 GALNT17Q6IS24 598 aa9.34□□□□□ -0.91
ERCC8-205ENST00000477893 TSHZ1Q6ZSZ6 1077 aa9.34□□□□□ -0.91
ERCC8-205ENST00000477893 NEK8Q86SG6 692 aa9.34□□□□□ -0.91
ERCC8-205ENST00000477893 LRRC71Q8N4P6 559 aa9.34□□□□□ -0.91
ERCC8-205ENST00000477893 BANK1Q8NDB2 785 aa9.34□□□□□ -0.91
ERCC8-205ENST00000477893 APBB2Q92870 758 aa9.34□□□□□ -0.91
ERCC8-205ENST00000477893 SCLT1Q96NL6 688 aa9.34□□□□□ -0.91
ERCC8-205ENST00000477893 C17orf80Q9BSJ5 609 aa9.34□□□□□ -0.91
ERCC8-205ENST00000477893 AGO3Q9H9G7 860 aaKnown RBP9.34□□□□□ -0.91
ERCC8-205ENST00000477893 BRMS1Q9HCU9 246 aa9.34□□□□□ -0.91
ERCC8-205ENST00000477893 AKT3Q9Y243 479 aa9.34□□□□□ -0.91
ERCC8-205ENST00000477893 COL4A4P53420 1690 aaPredicted RBP9.34□□□□□ -0.91
ERCC8-205ENST00000477893 SPTBN5Q9NRC6 3674 aaKnown RBP9.34□□□□□ -0.91
ERCC8-205ENST00000477893 PRUNE2Q8WUY3 3088 aa9.33□□□□□ -0.92
ERCC8-205ENST00000477893 MICAL3Q7RTP6 2002 aa9.33□□□□□ -0.92
ERCC8-205ENST00000477893 KAT6AQ92794 2004 aa9.33□□□□□ -0.92
ERCC8-205ENST00000477893 SMIM35A0A1B0GVV1 85 aa9.33□□□□□ -0.92
ERCC8-205ENST00000477893 LINC01553A4QN01 128 aa9.33□□□□□ -0.92
ERCC8-205ENST00000477893 DLL1O00548 723 aa9.33□□□□□ -0.92
ERCC8-205ENST00000477893 GTPBP6O43824 516 aaPredicted RBP9.33□□□□□ -0.92
ERCC8-205ENST00000477893 ZNF862O60290 1169 aa9.33□□□□□ -0.92
ERCC8-205ENST00000477893 PSMD10O75832 226 aa9.33□□□□□ -0.92
ERCC8-205ENST00000477893 ATP2B1P20020 1258 aa9.33□□□□□ -0.92
ERCC8-205ENST00000477893 NFX1Q12986 1120 aaKnown RBP9.33□□□□□ -0.92
ERCC8-205ENST00000477893 GRB10Q13322 594 aa9.33□□□□□ -0.92
ERCC8-205ENST00000477893 MTERF2Q49AM1 385 aa9.33□□□□□ -0.92
ERCC8-205ENST00000477893 PLA2G4FQ68DD2 849 aa9.33□□□□□ -0.92
ERCC8-205ENST00000477893 NCAPH2Q6IBW4 605 aa9.33□□□□□ -0.92
ERCC8-205ENST00000477893 DIS3L2Q8IYB7 885 aaKnown RBP9.33□□□□□ -0.92
ERCC8-205ENST00000477893 ETNPPLQ8TBG4 499 aa9.33□□□□□ -0.92
ERCC8-205ENST00000477893 LINC01599Q8WXQ3 324 aa9.33□□□□□ -0.92
ERCC8-205ENST00000477893 BBXQ8WY36 941 aaPredicted RBP9.33□□□□□ -0.92
ERCC8-205ENST00000477893 FAM167AQ96KS9 214 aa9.33□□□□□ -0.92
ERCC8-205ENST00000477893 RIT2Q99578 217 aa9.33□□□□□ -0.92
ERCC8-205ENST00000477893 OSMRQ99650 979 aa9.33□□□□□ -0.92
ERCC8-205ENST00000477893 CELF4Q9BZC1 486 aaKnown RBP9.33□□□□□ -0.92
ERCC8-205ENST00000477893 SUGCTQ9HAC7 445 aa9.33□□□□□ -0.92
ERCC8-205ENST00000477893 CDHR5Q9HBB8 845 aa9.33□□□□□ -0.92
ERCC8-205ENST00000477893 PADI3Q9ULW8 664 aa9.33□□□□□ -0.92
ERCC8-205ENST00000477893 INSL6Q9Y581 213 aa9.33□□□□□ -0.92
ERCC8-205ENST00000477893 MAFBQ9Y5Q3 323 aaPredicted RBP9.33□□□□□ -0.92
ERCC8-205ENST00000477893 A0A0C4DFX4 3053 aa9.33□□□□□ -0.92
ERCC8-205ENST00000477893 COL1A2P08123 1366 aa9.33□□□□□ -0.92
ERCC8-205ENST00000477893 CYP3A7-CYP3A51PA0A087WV96 503 aa9.32□□□□□ -0.92
ERCC8-205ENST00000477893 BTBD18B2RXH4 712 aa9.32□□□□□ -0.92
ERCC8-205ENST00000477893 RPS6KA5O75582 802 aa9.32□□□□□ -0.92
ERCC8-205ENST00000477893 MMP1P03956 469 aa9.32□□□□□ -0.92
ERCC8-205ENST00000477893 CYP3A7P24462 503 aa9.32□□□□□ -0.92
ERCC8-205ENST00000477893 SFNP31947 248 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms