RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 SLC6A19Q695T7 634 aa5.73□□□□□ -1.49
CKS1B-207ENST00000477676 CCDC84Q86UT8 332 aaPredicted RBP5.73□□□□□ -1.49
CKS1B-207ENST00000477676 PANK1Q8TE04 598 aa5.73□□□□□ -1.49
CKS1B-207ENST00000477676 ZNF384Q8TF68 577 aa5.73□□□□□ -1.49
CKS1B-207ENST00000477676 TBC1D22AQ8WUA7 517 aa5.73□□□□□ -1.49
CKS1B-207ENST00000477676 FAM151AQ8WW52 585 aa5.73□□□□□ -1.49
CKS1B-207ENST00000477676 DPF3Q92784 378 aa5.73□□□□□ -1.49
CKS1B-207ENST00000477676 MIR1-1HGQ9H1L0 117 aa5.73□□□□□ -1.49
CKS1B-207ENST00000477676 GPATCH2Q9NW75 528 aa5.73□□□□□ -1.49
CKS1B-207ENST00000477676 ZNF521Q96K83 1311 aa5.73□□□□□ -1.49
CKS1B-207ENST00000477676 KIF16BQ96L93 1317 aa5.73□□□□□ -1.49
CKS1B-207ENST00000477676 MYH1P12882 1939 aa5.72□□□□□ -1.49
CKS1B-207ENST00000477676 DDTLA6NHG4 134 aaPredicted RBP5.72□□□□□ -1.49
CKS1B-207ENST00000477676 PSPNO60542 156 aa5.72□□□□□ -1.49
CKS1B-207ENST00000477676 SGPL1O95470 568 aa5.72□□□□□ -1.49
CKS1B-207ENST00000477676 PHKA1P46020 1223 aa5.72□□□□□ -1.49
CKS1B-207ENST00000477676 FLT3LGP49771 235 aa5.72□□□□□ -1.49
CKS1B-207ENST00000477676 CHMP4BP1P59074 171 aa5.72□□□□□ -1.49
CKS1B-207ENST00000477676 KCNA1Q09470 495 aa5.72□□□□□ -1.49
CKS1B-207ENST00000477676 RRP1BQ14684 758 aaKnown RBP5.72□□□□□ -1.49
CKS1B-207ENST00000477676 KIF22Q14807 665 aa5.72□□□□□ -1.49
CKS1B-207ENST00000477676 TIGD5Q53EQ6 642 aa5.72□□□□□ -1.49
CKS1B-207ENST00000477676 PRAMEF13Q5VWM6 474 aa5.72□□□□□ -1.49
CKS1B-207ENST00000477676 VPS37DQ86XT2 251 aa5.72□□□□□ -1.49
CKS1B-207ENST00000477676 LILRA2Q8N149 483 aa5.72□□□□□ -1.49
CKS1B-207ENST00000477676 OXR1Q8N573 874 aa5.72□□□□□ -1.49
CKS1B-207ENST00000477676 PDZD8Q8NEN9 1154 aa5.72□□□□□ -1.49
CKS1B-207ENST00000477676 RAET1EQ8TD07 263 aa5.72□□□□□ -1.49
CKS1B-207ENST00000477676 DIS3LQ8TF46 1054 aaKnown RBP5.72□□□□□ -1.49
CKS1B-207ENST00000477676 U2AF1L4Q8WU68 220 aaKnown RBP5.72□□□□□ -1.49
CKS1B-207ENST00000477676 DHX38Q92620 1227 aaKnown RBP5.72□□□□□ -1.49
CKS1B-207ENST00000477676 DDX4Q9NQI0 724 aaKnown RBP5.72□□□□□ -1.49
CKS1B-207ENST00000477676 STAP2Q9UGK3 403 aa5.72□□□□□ -1.49
CKS1B-207ENST00000477676 SUGT1Q9Y2Z0 365 aa5.72□□□□□ -1.49
CKS1B-207ENST00000477676 AFG3L2Q9Y4W6 797 aa5.72□□□□□ -1.49
CKS1B-207ENST00000477676 XIRP2A4UGR9 3374 aa5.72□□□□□ -1.49
CKS1B-207ENST00000477676 MAST2Q6P0Q8 1798 aa5.71□□□□□ -1.5
CKS1B-207ENST00000477676 EYA2O00167 538 aa5.71□□□□□ -1.5
CKS1B-207ENST00000477676 CXCL11O14625 94 aa5.71□□□□□ -1.5
CKS1B-207ENST00000477676 ADCY3O60266 1144 aa5.71□□□□□ -1.5
CKS1B-207ENST00000477676 FRAT2O75474 233 aaPredicted RBP5.71□□□□□ -1.5
CKS1B-207ENST00000477676 WDHD1O75717 1129 aaPredicted RBP5.71□□□□□ -1.5
CKS1B-207ENST00000477676 PGRP06401 933 aa5.71□□□□□ -1.5
CKS1B-207ENST00000477676 ADORA1P30542 326 aa5.71□□□□□ -1.5
CKS1B-207ENST00000477676 GNA15P30679 374 aa5.71□□□□□ -1.5
CKS1B-207ENST00000477676 RGS3P49796 1198 aa5.71□□□□□ -1.5
CKS1B-207ENST00000477676 PUM3Q15397 648 aaKnown RBP5.71□□□□□ -1.5
CKS1B-207ENST00000477676 ZXDCQ2QGD7 858 aaPredicted RBP5.71□□□□□ -1.5
CKS1B-207ENST00000477676 TSNAXIP1Q2TAA8 658 aa5.71□□□□□ -1.5
CKS1B-207ENST00000477676 CAVIN4Q5BKX8 364 aa5.71□□□□□ -1.5
CKS1B-207ENST00000477676 TREML2Q5T2D2 321 aa5.71□□□□□ -1.5
CKS1B-207ENST00000477676 ERICH6BQ5W0A0 696 aa5.71□□□□□ -1.5
CKS1B-207ENST00000477676 DCAF15Q66K64 600 aa5.71□□□□□ -1.5
CKS1B-207ENST00000477676 MRPL41Q8IXM3 137 aaKnown RBP5.71□□□□□ -1.5
CKS1B-207ENST00000477676 FEZF2Q8TBJ5 459 aa5.71□□□□□ -1.5
CKS1B-207ENST00000477676 INTS4Q96HW7 963 aaKnown RBP5.71□□□□□ -1.5
CKS1B-207ENST00000477676 DEFB118Q96PH6 123 aa5.71□□□□□ -1.5
CKS1B-207ENST00000477676 CWC22Q9HCG8 908 aaKnown RBP5.71□□□□□ -1.5
CKS1B-207ENST00000477676 MRS2Q9HD23 443 aa5.71□□□□□ -1.5
CKS1B-207ENST00000477676 USP40Q9NVE5 1235 aa5.71□□□□□ -1.5
CKS1B-207ENST00000477676 TMOD2Q9NZR1 351 aa5.71□□□□□ -1.5
CKS1B-207ENST00000477676 YBX2Q9Y2T7 364 aaKnown RBP5.71□□□□□ -1.5
CKS1B-207ENST00000477676 ZHX2Q9Y6X8 837 aa5.71□□□□□ -1.5
CKS1B-207ENST00000477676 RLFQ13129 1914 aa5.71□□□□□ -1.5
CKS1B-207ENST00000477676 LTBP2Q14767 1821 aa5.71□□□□□ -1.5
CKS1B-207ENST00000477676 GAKO14976 1311 aa5.71□□□□□ -1.5
CKS1B-207ENST00000477676 TRANK1O15050 2925 aa5.71□□□□□ -1.5
CKS1B-207ENST00000477676 BDP1A6H8Y1 2624 aa5.7□□□□□ -1.5
CKS1B-207ENST00000477676 ZGLP1P0C6A0 271 aa5.7□□□□□ -1.5
CKS1B-207ENST00000477676 RHBDL3P58872 404 aa5.7□□□□□ -1.5
CKS1B-207ENST00000477676 GADL1Q6ZQY3 521 aa5.7□□□□□ -1.5
CKS1B-207ENST00000477676 Q7L0L9 218 aa5.7□□□□□ -1.5
CKS1B-207ENST00000477676 CDH24Q86UP0 819 aa5.7□□□□□ -1.5
CKS1B-207ENST00000477676 SCYL3Q8IZE3 742 aa5.7□□□□□ -1.5
CKS1B-207ENST00000477676 ZDHHC14Q8IZN3 488 aa5.7□□□□□ -1.5
CKS1B-207ENST00000477676 WDR66Q8TBY9 1149 aa5.7□□□□□ -1.5
CKS1B-207ENST00000477676 SSH1Q8WYL5 1049 aa5.7□□□□□ -1.5
CKS1B-207ENST00000477676 LPIN2Q92539 896 aa5.7□□□□□ -1.5
CKS1B-207ENST00000477676 PAWRQ96IZ0 340 aaKnown RBP5.7□□□□□ -1.5
CKS1B-207ENST00000477676 PARK7Q99497 189 aaKnown RBP5.7□□□□□ -1.5
CKS1B-207ENST00000477676 GDF15Q99988 308 aa5.7□□□□□ -1.5
CKS1B-207ENST00000477676 IDI2Q9BXS1 227 aa5.7□□□□□ -1.5
CKS1B-207ENST00000477676 SIL1Q9H173 461 aa5.7□□□□□ -1.5
CKS1B-207ENST00000477676 ADAM30Q9UKF2 790 aa5.7□□□□□ -1.5
CKS1B-207ENST00000477676 GJD2Q9UKL4 321 aa5.7□□□□□ -1.5
CKS1B-207ENST00000477676 PA2G4Q9UQ80 394 aaKnown RBP5.7□□□□□ -1.5
CKS1B-207ENST00000477676 MAST3O60307 1309 aa5.7□□□□□ -1.5
CKS1B-207ENST00000477676 SALL1Q9NSC2 1324 aa5.7□□□□□ -1.5
CKS1B-207ENST00000477676 PARP14Q460N5 1801 aa5.69□□□□□ -1.5
CKS1B-207ENST00000477676 PRPF40AO75400 957 aaKnown RBP5.69□□□□□ -1.5
CKS1B-207ENST00000477676 BPNT1O95861 308 aa5.69□□□□□ -1.5
CKS1B-207ENST00000477676 IFIT1P09914 478 aaKnown RBP5.69□□□□□ -1.5
CKS1B-207ENST00000477676 SLC5A1P13866 664 aa5.69□□□□□ -1.5
CKS1B-207ENST00000477676 PI3P19957 117 aa5.69□□□□□ -1.5
CKS1B-207ENST00000477676 HOXD10P28358 340 aa5.69□□□□□ -1.5
CKS1B-207ENST00000477676 TPP2P29144 1249 aaPredicted RBP5.69□□□□□ -1.5
CKS1B-207ENST00000477676 YARSP54577 528 aaKnown RBP5.69□□□□□ -1.5
CKS1B-207ENST00000477676 UBXN2AP68543 259 aa5.69□□□□□ -1.5
CKS1B-207ENST00000477676 ATP2B3Q16720 1220 aa5.69□□□□□ -1.5
CKS1B-207ENST00000477676 SHROOM1Q2M3G4 852 aaPredicted RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms