RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 KRT14P02533 472 aa19.72■□□□□ 0.75
CCM2-209ENST00000477605 CCDC172P0C7W6 258 aa19.72■□□□□ 0.75
CCM2-209ENST00000477605 PSMC2P35998 433 aaKnown RBP19.72■□□□□ 0.75
CCM2-209ENST00000477605 DOK7Q18PE1 504 aa19.72■□□□□ 0.75
CCM2-209ENST00000477605 PEX26Q7Z412 305 aa19.72■□□□□ 0.75
CCM2-209ENST00000477605 TADA2BQ86TJ2 420 aa19.72■□□□□ 0.75
CCM2-209ENST00000477605 KLHL7Q8IXQ5 586 aa19.72■□□□□ 0.75
CCM2-209ENST00000477605 ARFGAP2Q8N6H7 521 aa19.72■□□□□ 0.75
CCM2-209ENST00000477605 PAGR1Q9BTK6 254 aa19.72■□□□□ 0.75
CCM2-209ENST00000477605 BHMT2Q9H2M3 363 aa19.72■□□□□ 0.75
CCM2-209ENST00000477605 GCNT4Q9P109 453 aa19.72■□□□□ 0.75
CCM2-209ENST00000477605 MYH4Q9Y623 1939 aa19.71■□□□□ 0.75
CCM2-209ENST00000477605 LMNB1P20700 586 aa19.71■□□□□ 0.75
CCM2-209ENST00000477605 GUCY2FP51841 1108 aa19.71■□□□□ 0.75
CCM2-209ENST00000477605 TCERG1LQ5VWI1 586 aa19.71■□□□□ 0.75
CCM2-209ENST00000477605 STXBP4Q6ZWJ1 553 aa19.71■□□□□ 0.75
CCM2-209ENST00000477605 CCDC26Q8TAB7 109 aa19.71■□□□□ 0.75
CCM2-209ENST00000477605 FAM169AQ9Y6X4 670 aa19.71■□□□□ 0.75
CCM2-209ENST00000477605 GOLGA6L10A6NI86 522 aa19.71■□□□□ 0.75
CCM2-209ENST00000477605 RAD21O60216 631 aa19.71■□□□□ 0.75
CCM2-209ENST00000477605 NR1D1P20393 614 aa19.71■□□□□ 0.75
CCM2-209ENST00000477605 ERVK-9P63128 1117 aa19.71■□□□□ 0.75
CCM2-209ENST00000477605 MTMR3Q13615 1198 aa19.71■□□□□ 0.75
CCM2-209ENST00000477605 CLUL1Q15846 466 aa19.71■□□□□ 0.75
CCM2-209ENST00000477605 PPP2R5EQ16537 467 aa19.71■□□□□ 0.75
CCM2-209ENST00000477605 RINT1Q6NUQ1 792 aa19.71■□□□□ 0.75
CCM2-209ENST00000477605 MAATS1Q7Z4T9 603 aa19.71■□□□□ 0.75
CCM2-209ENST00000477605 METTL13Q8N6R0 699 aa19.71■□□□□ 0.75
CCM2-209ENST00000477605 SLC30A5Q8TAD4 765 aa19.71■□□□□ 0.75
CCM2-209ENST00000477605 ZFP91Q96JP5 570 aaPredicted RBP19.71■□□□□ 0.75
CCM2-209ENST00000477605 UIMC1Q96RL1 719 aa19.71■□□□□ 0.75
CCM2-209ENST00000477605 HSD17B14Q9BPX1 270 aa19.71■□□□□ 0.75
CCM2-209ENST00000477605 RUSC1Q9BVN2 902 aa19.71■□□□□ 0.75
CCM2-209ENST00000477605 STK33Q9BYT3 514 aa19.71■□□□□ 0.75
CCM2-209ENST00000477605 KIF13BQ9NQT8 1826 aa19.7■□□□□ 0.74
CCM2-209ENST00000477605 DCAF8L1A6NGE4 600 aa19.7■□□□□ 0.74
CCM2-209ENST00000477605 DDX3XO00571 662 aaKnown RBP eCLIP19.7■□□□□ 0.74
CCM2-209ENST00000477605 TGFB1I1O43294 461 aa19.7■□□□□ 0.74
CCM2-209ENST00000477605 NDUFB10O96000 172 aa19.7■□□□□ 0.74
CCM2-209ENST00000477605 BMP3P12645 472 aa19.7■□□□□ 0.74
CCM2-209ENST00000477605 ZNF76P36508 570 aa19.7■□□□□ 0.74
CCM2-209ENST00000477605 NLGN2Q8NFZ4 835 aa19.7■□□□□ 0.74
CCM2-209ENST00000477605 EPN3Q9H201 632 aa19.7■□□□□ 0.74
CCM2-209ENST00000477605 TMBIM4Q9HC24 238 aa19.7■□□□□ 0.74
CCM2-209ENST00000477605 KCND2Q9NZV8 630 aa19.7■□□□□ 0.74
CCM2-209ENST00000477605 FAM198AQ9UFP1 575 aa19.7■□□□□ 0.74
CCM2-209ENST00000477605 DDTLA6NHG4 134 aaPredicted RBP19.69■□□□□ 0.74
CCM2-209ENST00000477605 SART1O43290 800 aaKnown RBP19.69■□□□□ 0.74
CCM2-209ENST00000477605 FAM13AO94988 1023 aa19.69■□□□□ 0.74
CCM2-209ENST00000477605 SOX5P35711 763 aa19.69■□□□□ 0.74
CCM2-209ENST00000477605 ABCB5Q2M3G0 1257 aa19.69■□□□□ 0.74
CCM2-209ENST00000477605 FAM186BQ8IYM0 893 aa19.69■□□□□ 0.74
CCM2-209ENST00000477605 SEC14L1Q92503 715 aa19.69■□□□□ 0.74
CCM2-209ENST00000477605 HES6Q96HZ4 224 aa19.69■□□□□ 0.74
CCM2-209ENST00000477605 PLAAQ9Y263 795 aa19.69■□□□□ 0.74
CCM2-209ENST00000477605 NOC2LQ9Y3T9 749 aaKnown RBP19.69■□□□□ 0.74
CCM2-209ENST00000477605 NCANO14594 1321 aa19.69■□□□□ 0.74
CCM2-209ENST00000477605 RSPH10B2B2RC85 870 aa19.69■□□□□ 0.74
CCM2-209ENST00000477605 KRIT1O00522 736 aa19.69■□□□□ 0.74
CCM2-209ENST00000477605 NDUFAB1O14561 156 aa19.69■□□□□ 0.74
CCM2-209ENST00000477605 TMEM253P0C7T8 217 aa19.69■□□□□ 0.74
CCM2-209ENST00000477605 RSPH10BP0C881 870 aa19.69■□□□□ 0.74
CCM2-209ENST00000477605 ECHS1P30084 290 aa19.69■□□□□ 0.74
CCM2-209ENST00000477605 CASP4P49662 377 aa19.69■□□□□ 0.74
CCM2-209ENST00000477605 RNASE9P60153 205 aaKnown RBP19.69■□□□□ 0.74
CCM2-209ENST00000477605 PDCLQ13371 301 aa19.69■□□□□ 0.74
CCM2-209ENST00000477605 BIRC3Q13489 604 aa19.69■□□□□ 0.74
CCM2-209ENST00000477605 HLTFQ14527 1009 aaKnown RBP eCLIP19.69■□□□□ 0.74
CCM2-209ENST00000477605 PPP2R5AQ15172 486 aa19.69■□□□□ 0.74
CCM2-209ENST00000477605 STRIP1Q5VSL9 837 aa19.69■□□□□ 0.74
CCM2-209ENST00000477605 RUFY4Q6ZNE9 571 aa19.69■□□□□ 0.74
CCM2-209ENST00000477605 MICALCLQ6ZW33 695 aa19.69■□□□□ 0.74
CCM2-209ENST00000477605 NT5DC3Q86UY8 548 aa19.69■□□□□ 0.74
CCM2-209ENST00000477605 GGA2Q9UJY4 613 aa19.69■□□□□ 0.74
CCM2-209ENST00000477605 TMCO5BA8MYB1 307 aa19.68■□□□□ 0.74
CCM2-209ENST00000477605 LSP1P33241 339 aa19.68■□□□□ 0.74
CCM2-209ENST00000477605 SPDYCQ5MJ68 293 aa19.68■□□□□ 0.74
CCM2-209ENST00000477605 KCTD16Q68DU8 428 aa19.68■□□□□ 0.74
CCM2-209ENST00000477605 C1orf186Q6ZWK4 172 aa19.68■□□□□ 0.74
CCM2-209ENST00000477605 SH2D3CQ8N5H7 860 aa19.68■□□□□ 0.74
CCM2-209ENST00000477605 RNPC3Q96LT9 517 aaKnown RBP19.68■□□□□ 0.74
CCM2-209ENST00000477605 AMFRQ9UKV5 643 aa19.68■□□□□ 0.74
CCM2-209ENST00000477605 PCDHB13Q9Y5F0 798 aa19.68■□□□□ 0.74
CCM2-209ENST00000477605 IGLV3-22A0A075B6J6 115 aa19.67■□□□□ 0.74
CCM2-209ENST00000477605 PPP1R37O75864 691 aa19.67■□□□□ 0.74
CCM2-209ENST00000477605 RFX1P22670 979 aa19.67■□□□□ 0.74
CCM2-209ENST00000477605 MDH1P40925 334 aaKnown RBP19.67■□□□□ 0.74
CCM2-209ENST00000477605 IKQ13123 557 aaPredicted RBP19.67■□□□□ 0.74
CCM2-209ENST00000477605 ITGB3BPQ13352 177 aaPredicted RBP19.67■□□□□ 0.74
CCM2-209ENST00000477605 PPP2R5CQ13362 524 aa19.67■□□□□ 0.74
CCM2-209ENST00000477605 MYBPC2Q14324 1141 aa19.67■□□□□ 0.74
CCM2-209ENST00000477605 SH3BP5LQ7L8J4 393 aa19.67■□□□□ 0.74
CCM2-209ENST00000477605 U2AF1L4Q8WU68 220 aaKnown RBP19.67■□□□□ 0.74
CCM2-209ENST00000477605 VTI1AQ96AJ9 217 aa19.67■□□□□ 0.74
CCM2-209ENST00000477605 PARVGQ9HBI0 331 aa19.67■□□□□ 0.74
CCM2-209ENST00000477605 FAM114A2Q9NRY5 505 aa19.67■□□□□ 0.74
CCM2-209ENST00000477605 GCOM1H8Y6P7 765 aaPredicted RBP19.67■□□□□ 0.74
CCM2-209ENST00000477605 EML1O00423 815 aa19.67■□□□□ 0.74
CCM2-209ENST00000477605 OPLAHO14841 1288 aa19.67■□□□□ 0.74
CCM2-209ENST00000477605 MYZAPP0CAP1 466 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms