RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 GPR32O75388 356 aa13.82□□□□□ -0.2
CLCNKA-205ENST00000477360 GJB5O95377 273 aa13.82□□□□□ -0.2
CLCNKA-205ENST00000477360 ATP2C1P98194 919 aaPredicted RBP13.82□□□□□ -0.2
CLCNKA-205ENST00000477360 POU5F1BQ06416 359 aa13.82□□□□□ -0.2
CLCNKA-205ENST00000477360 PTGDRQ13258 359 aa13.82□□□□□ -0.2
CLCNKA-205ENST00000477360 MCTP1Q6DN14 999 aa13.82□□□□□ -0.2
CLCNKA-205ENST00000477360 DEFB123Q8N688 67 aa13.82□□□□□ -0.2
CLCNKA-205ENST00000477360 TCP11Q8WWU5 503 aa13.82□□□□□ -0.2
CLCNKA-205ENST00000477360 RSPH1Q8WYR4 309 aa13.82□□□□□ -0.2
CLCNKA-205ENST00000477360 TOP1MTQ969P6 601 aa13.82□□□□□ -0.2
CLCNKA-205ENST00000477360 NACC1Q96RE7 527 aa13.82□□□□□ -0.2
CLCNKA-205ENST00000477360 RAD9AQ99638 391 aa13.82□□□□□ -0.2
CLCNKA-205ENST00000477360 INO80BQ9C086 356 aaPredicted RBP13.82□□□□□ -0.2
CLCNKA-205ENST00000477360 DBR1Q9UK59 544 aaKnown RBP13.82□□□□□ -0.2
CLCNKA-205ENST00000477360 TET1Q8NFU7 2136 aa13.81□□□□□ -0.2
CLCNKA-205ENST00000477360 DGAT1O75907 488 aa13.81□□□□□ -0.2
CLCNKA-205ENST00000477360 GHRP10912 638 aa13.81□□□□□ -0.2
CLCNKA-205ENST00000477360 ATP2B1P20020 1258 aa13.81□□□□□ -0.2
CLCNKA-205ENST00000477360 EIF4BP23588 611 aaKnown RBP13.81□□□□□ -0.2
CLCNKA-205ENST00000477360 HTRA4P83105 476 aaPredicted RBP13.81□□□□□ -0.2
CLCNKA-205ENST00000477360 PAK2Q13177 524 aa13.81□□□□□ -0.2
CLCNKA-205ENST00000477360 DTHD1Q6ZMT9 781 aa13.81□□□□□ -0.2
CLCNKA-205ENST00000477360 DYDC2Q96IM9 177 aa13.81□□□□□ -0.2
CLCNKA-205ENST00000477360 CEP170P1Q96L14 293 aa13.81□□□□□ -0.2
CLCNKA-205ENST00000477360 AK8Q96MA6 479 aa13.81□□□□□ -0.2
CLCNKA-205ENST00000477360 TSPYL2Q9H2G4 693 aaPredicted RBP13.81□□□□□ -0.2
CLCNKA-205ENST00000477360 ADAMTS10Q9H324 1103 aa13.81□□□□□ -0.2
CLCNKA-205ENST00000477360 SEMA6BQ9H3T3 888 aa13.81□□□□□ -0.2
CLCNKA-205ENST00000477360 ZSCAN16Q9H4T2 348 aaPredicted RBP13.81□□□□□ -0.2
CLCNKA-205ENST00000477360 SLC28A3Q9HAS3 691 aa13.81□□□□□ -0.2
CLCNKA-205ENST00000477360 MTMR10Q9NXD2 777 aa13.81□□□□□ -0.2
CLCNKA-205ENST00000477360 RGL1Q9NZL6 768 aa13.81□□□□□ -0.2
CLCNKA-205ENST00000477360 WRAP73Q9P2S5 460 aaPredicted RBP13.81□□□□□ -0.2
CLCNKA-205ENST00000477360 PADI3Q9ULW8 664 aa13.81□□□□□ -0.2
CLCNKA-205ENST00000477360 INSL6Q9Y581 213 aa13.81□□□□□ -0.2
CLCNKA-205ENST00000477360 PCDHB6Q9Y5E3 794 aa13.81□□□□□ -0.2
CLCNKA-205ENST00000477360 SCN5AQ14524 2016 aa13.81□□□□□ -0.2
CLCNKA-205ENST00000477360 RPS6KA5O75582 802 aa13.8□□□□□ -0.2
CLCNKA-205ENST00000477360 SPATA31C1P0DKV0 1188 aa13.8□□□□□ -0.2
CLCNKA-205ENST00000477360 SYT1P21579 422 aa13.8□□□□□ -0.2
CLCNKA-205ENST00000477360 TECP42680 631 aa13.8□□□□□ -0.2
CLCNKA-205ENST00000477360 GPC3P51654 580 aa13.8□□□□□ -0.2
CLCNKA-205ENST00000477360 MXD4Q14582 209 aaPredicted RBP13.8□□□□□ -0.2
CLCNKA-205ENST00000477360 MTERF2Q49AM1 385 aa13.8□□□□□ -0.2
CLCNKA-205ENST00000477360 CATSPER3Q86XQ3 398 aa13.8□□□□□ -0.2
CLCNKA-205ENST00000477360 TPH2Q8IWU9 490 aa13.8□□□□□ -0.2
CLCNKA-205ENST00000477360 SP7Q8TDD2 431 aaPredicted RBP13.8□□□□□ -0.2
CLCNKA-205ENST00000477360 AGO3Q9H9G7 860 aaKnown RBP13.8□□□□□ -0.2
CLCNKA-205ENST00000477360 ERVK-5Q9HDB9 667 aa13.8□□□□□ -0.2
CLCNKA-205ENST00000477360 C1orf112Q9NSG2 853 aa13.8□□□□□ -0.2
CLCNKA-205ENST00000477360 LRWD1Q9UFC0 647 aa13.8□□□□□ -0.2
CLCNKA-205ENST00000477360 AKT3Q9Y243 479 aa13.8□□□□□ -0.2
CLCNKA-205ENST00000477360 WDR81Q562E7 1941 aa13.8□□□□□ -0.2
CLCNKA-205ENST00000477360 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.79□□□□□ -0.2
CLCNKA-205ENST00000477360 POTEMA6NI47 508 aa13.79□□□□□ -0.2
CLCNKA-205ENST00000477360 ENPP3O14638 875 aa13.79□□□□□ -0.2
CLCNKA-205ENST00000477360 DARSP14868 501 aaKnown RBP13.79□□□□□ -0.2
CLCNKA-205ENST00000477360 RARRES1P49788 294 aa13.79□□□□□ -0.2
CLCNKA-205ENST00000477360 CLCN3P51790 818 aa13.79□□□□□ -0.2
CLCNKA-205ENST00000477360 POLGP54098 1239 aaPredicted RBP13.79□□□□□ -0.2
CLCNKA-205ENST00000477360 NLRP11P59045 1033 aaKnown RBP13.79□□□□□ -0.2
CLCNKA-205ENST00000477360 TCTN1Q2MV58 587 aa13.79□□□□□ -0.2
CLCNKA-205ENST00000477360 XKR9Q5GH70 373 aa13.79□□□□□ -0.2
CLCNKA-205ENST00000477360 CRIPAKQ8N1N5 446 aa13.79□□□□□ -0.2
CLCNKA-205ENST00000477360 MCPH1Q8NEM0 835 aa13.79□□□□□ -0.2
CLCNKA-205ENST00000477360 PSPC1Q8WXF1 523 aaKnown RBP13.79□□□□□ -0.2
CLCNKA-205ENST00000477360 ZBTB10Q96DT7 871 aa13.79□□□□□ -0.2
CLCNKA-205ENST00000477360 TRAIPQ9BWF2 469 aa13.79□□□□□ -0.2
CLCNKA-205ENST00000477360 NFKBIZQ9BYH8 718 aa13.79□□□□□ -0.2
CLCNKA-205ENST00000477360 GCOM2Q9BZD3 368 aaPredicted RBP13.79□□□□□ -0.2
CLCNKA-205ENST00000477360 ZNF576Q9H609 170 aa13.79□□□□□ -0.2
CLCNKA-205ENST00000477360 SUGCTQ9HAC7 445 aa13.79□□□□□ -0.2
CLCNKA-205ENST00000477360 CHST12Q9NRB3 414 aa13.79□□□□□ -0.2
CLCNKA-205ENST00000477360 SUCLA2Q9P2R7 463 aaPredicted RBP13.79□□□□□ -0.2
CLCNKA-205ENST00000477360 SZT2Q5T011 3432 aa13.78□□□□□ -0.2
CLCNKA-205ENST00000477360 MYH15Q9Y2K3 1946 aa13.78□□□□□ -0.2
CLCNKA-205ENST00000477360 GRXCR1A8MXD5 290 aa13.78□□□□□ -0.2
CLCNKA-205ENST00000477360 TLL1O43897 1013 aa13.78□□□□□ -0.2
CLCNKA-205ENST00000477360 HSP90AA1P07900 732 aaKnown RBP13.78□□□□□ -0.2
CLCNKA-205ENST00000477360 STAG3L1P0CL83 205 aa13.78□□□□□ -0.2
CLCNKA-205ENST00000477360 CD52P31358 61 aa13.78□□□□□ -0.2
CLCNKA-205ENST00000477360 DEFB103AP81534 67 aa13.78□□□□□ -0.2
CLCNKA-205ENST00000477360 CYP4A11Q02928 519 aa13.78□□□□□ -0.2
CLCNKA-205ENST00000477360 CTTNQ14247 550 aaKnown RBP13.78□□□□□ -0.2
CLCNKA-205ENST00000477360 KIZQ2M2Z5 673 aa13.78□□□□□ -0.2
CLCNKA-205ENST00000477360 KRT79Q5XKE5 535 aa13.78□□□□□ -0.2
CLCNKA-205ENST00000477360 IFNLR1Q8IU57 520 aaPredicted RBP13.78□□□□□ -0.2
CLCNKA-205ENST00000477360 LRRC71Q8N4P6 559 aa13.78□□□□□ -0.2
CLCNKA-205ENST00000477360 CCDC43Q96MW1 224 aaKnown RBP13.78□□□□□ -0.2
CLCNKA-205ENST00000477360 SAMD11Q96NU1 681 aa13.78□□□□□ -0.2
CLCNKA-205ENST00000477360 ZBED2Q9BTP6 218 aa13.78□□□□□ -0.2
CLCNKA-205ENST00000477360 TTYH1Q9H313 450 aaPredicted RBP13.78□□□□□ -0.2
CLCNKA-205ENST00000477360 ELAC1Q9H777 363 aaKnown RBP13.78□□□□□ -0.2
CLCNKA-205ENST00000477360 RGS18Q9NS28 235 aa13.78□□□□□ -0.2
CLCNKA-205ENST00000477360 STXBP5LQ9Y2K9 1186 aa13.78□□□□□ -0.2
CLCNKA-205ENST00000477360 STX6O43752 255 aa13.77□□□□□ -0.21
CLCNKA-205ENST00000477360 VTNP04004 478 aa13.77□□□□□ -0.21
CLCNKA-205ENST00000477360 POU3F3P20264 500 aaPredicted RBP13.77□□□□□ -0.21
CLCNKA-205ENST00000477360 SFPQP23246 707 aaKnown RBP eCLIP13.77□□□□□ -0.21
CLCNKA-205ENST00000477360 PBX2P40425 430 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms