RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	PLP2	Q04941	152 aa		5.51	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	PUM1	Q14671	1186 aa	Known RBP eCLIP	5.51	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	ZNF394	Q53GI3	561 aa		5.51	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	ANKRD39	Q53RE8	183 aa		5.51	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	CAVIN4	Q5BKX8	364 aa		5.51	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	METTL24	Q5JXM2	366 aa		5.51	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	GORAB	Q5T7V8	394 aa		5.51	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	RUFY4	Q6ZNE9	571 aa		5.51	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	USP48	Q86UV5	1035 aa		5.51	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	VPS37D	Q86XT2	251 aa		5.51	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	ERC1	Q8IUD2	1116 aa		5.51	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	SYNE4	Q8N205	404 aa		5.51	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	BACH2	Q9BYV9	841 aa		5.51	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	BCL11A	Q9H165	835 aa		5.51	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	VPS33B	Q9H267	617 aa		5.51	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	GREM2	Q9H772	168 aa		5.51	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	GP6	Q9HCN6	339 aa		5.51	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	ATP6V0A2	Q9Y487	856 aa		5.51	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	PCDHGB7	Q9Y5F8	929 aa		5.51	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	RTL9	Q8NET4	1388 aa		5.51	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	COL24A1	Q17RW2	1714 aa		5.51	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	XDH	P47989	1333 aa		5.5	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	IRS2	Q9Y4H2	1338 aa		5.5	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	SURF6	O75683	361 aa	Known RBP	5.5	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	IFIT1	P09914	478 aa	Known RBP	5.5	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	IL15	P40933	162 aa	Predicted RBP	5.5	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	CASP7	P55210	303 aa		5.5	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	EIF6	P56537	245 aa	Known RBP	5.5	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	FOXO4	P98177	505 aa		5.5	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	ATP8B2	P98198	1209 aa		5.5	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	RABL6	Q3YEC7	729 aa	Predicted RBP	5.5	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	PLEKHN1	Q494U1	663 aa	Predicted RBP	5.5	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	CNKSR3	Q6P9H4	555 aa		5.5	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	UNC5A	Q6ZN44	842 aa		5.5	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	NIM1K	Q8IY84	436 aa		5.5	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	RBBP8NL	Q8NC74	664 aa	Predicted RBP	5.5	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	CELF1	Q92879	486 aa	Known RBP	5.5	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	BRF1	Q92994	677 aa		5.5	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	TM9SF2	Q99805	663 aa		5.5	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	BDH2	Q9BUT1	245 aa		5.5	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	RWDD1	Q9H446	243 aa	Predicted RBP	5.5	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	LUC7L	Q9NQ29	371 aa	Known RBP	5.5	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	GNL3L	Q9NVN8	582 aa	Known RBP	5.5	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	PPT2	Q9UMR5	302 aa		5.5	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	ZNF451	Q9Y4E5	1061 aa		5.5	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	NRXN2	Q9P2S2	1712 aa		5.5	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	EYA2	O00167	538 aa		5.49	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	FGF10	O15520	208 aa	Predicted RBP	5.49	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	PPIP5K2	O43314	1243 aa		5.49	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	BUB1B	O60566	1050 aa	Predicted RBP	5.49	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	RAB11FIP3	O75154	756 aa		5.49	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	CIAO1	O76071	339 aa		5.49	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	UFL1	O94874	794 aa		5.49	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	TP53	P04637	393 aa	Predicted RBP	5.49	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	SLC5A1	P13866	664 aa		5.49	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	CD247	P20963	164 aa		5.49	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	KCNA3	P22001	575 aa		5.49	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	IGFBP6	P24592	240 aa	Predicted RBP	5.49	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	RACK1	P63244	317 aa	Known RBP	5.49	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	CHRND	Q07001	517 aa		5.49	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	TMEM62	Q0P6H9	643 aa		5.49	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	MTX1	Q13505	466 aa		5.49	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	TNIP1	Q15025	636 aa		5.49	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	HLA-DQA1	Q5Y7H0	255 aa		5.49	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	CWF19L1	Q69YN2	538 aa	Known RBP	5.49	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	ZNF804A	Q7Z570	1209 aa		5.49	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	FRMD5	Q7Z6J6	570 aa		5.49	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	CLASRP	Q8N2M8	674 aa	Known RBP	5.49	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	TP53I13	Q8NBR0	393 aa	Predicted RBP	5.49	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	FCRL3	Q96P31	734 aa	Predicted RBP	5.49	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	FERD3L	Q96RJ6	166 aa		5.49	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	CRBN	Q96SW2	442 aa		5.49	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	PSMD1	Q99460	953 aa		5.49	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	SIL1	Q9H173	461 aa		5.49	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	FAM86C1	Q9NVL1	165 aa		5.49	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	RNF181	Q9P0P0	153 aa		5.49	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	PLA2G2D	Q9UNK4	145 aa		5.49	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	TNN	Q9UQP3	1299 aa		5.49	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	HCFC2	Q9Y5Z7	792 aa		5.49	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	FHOD1	Q9Y613	1164 aa		5.49	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	GUCY2C	P25092	1073 aa		5.48	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	IARS	P41252	1262 aa	Known RBP	5.48	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	MAPKAPK2	P49137	400 aa		5.48	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	UBE4A	Q14139	1066 aa		5.48	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	PUM3	Q15397	648 aa	Known RBP	5.48	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	EPHA10	Q5JZY3	1008 aa		5.48	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	CCDC158	Q5M9N0	1113 aa		5.48	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	NOL9	Q5SY16	702 aa	Known RBP	5.48	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	C20orf194	Q5TEA3	1177 aa		5.48	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	CEP85	Q6P2H3	762 aa		5.48	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	LSR	Q86X29	649 aa	Predicted RBP	5.48	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	FIBCD1	Q8N539	461 aa		5.48	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	ANKRD44	Q8N8A2	993 aa		5.48	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	NAT16	Q8N8M0	369 aa		5.48	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	KIF1BP	Q96EK5	621 aa		5.48	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	GPATCH3	Q96I76	525 aa		5.48	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	PWWP2A	Q96N64	755 aa		5.48	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	NEUROD6	Q96NK8	337 aa		5.48	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	METTL5	Q9NRN9	209 aa	Known RBP	5.48	□□□□□ -1.53
NSMCE4A-208	ENST00000477289	ZBTB40	Q9NUA8	1239 aa		5.48	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms