RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 MNTQ99583 582 aa4.4□□□□□ -1.71
XRN1-211ENST00000477237 OR10A5Q9H207 317 aa4.4□□□□□ -1.71
XRN1-211ENST00000477237 COL11A2P13942 1736 aaPredicted RBP4.39□□□□□ -1.71
XRN1-211ENST00000477237 A0A1W2PQU0 124 aa4.39□□□□□ -1.71
XRN1-211ENST00000477237 MAN2B1O00754 1011 aa4.39□□□□□ -1.71
XRN1-211ENST00000477237 C4BPAP04003 597 aaKnown RBP4.39□□□□□ -1.71
XRN1-211ENST00000477237 ZFP36P26651 326 aaKnown RBP4.39□□□□□ -1.71
XRN1-211ENST00000477237 SMAD3P84022 425 aaKnown RBP4.39□□□□□ -1.71
XRN1-211ENST00000477237 FBXO42Q6P3S6 717 aa4.39□□□□□ -1.71
XRN1-211ENST00000477237 FAM111BQ6SJ93 734 aa4.39□□□□□ -1.71
XRN1-211ENST00000477237 ARHGAP36Q6ZRI8 547 aa4.39□□□□□ -1.71
XRN1-211ENST00000477237 LRP10Q7Z4F1 713 aa4.39□□□□□ -1.71
XRN1-211ENST00000477237 IFNL3Q8IZI9 196 aa4.39□□□□□ -1.71
XRN1-211ENST00000477237 BCL6BQ8N143 479 aaPredicted RBP4.39□□□□□ -1.71
XRN1-211ENST00000477237 SEC16BQ96JE7 1060 aa4.39□□□□□ -1.71
XRN1-211ENST00000477237 ZFYVE21Q9BQ24 234 aa4.39□□□□□ -1.71
XRN1-211ENST00000477237 UCKL1Q9NWZ5 548 aa4.39□□□□□ -1.71
XRN1-211ENST00000477237 SPATA31A6Q5VVP1 1343 aa4.39□□□□□ -1.71
XRN1-211ENST00000477237 SMAD7O15105 426 aaKnown RBP4.38□□□□□ -1.71
XRN1-211ENST00000477237 DDAH1O94760 285 aa4.38□□□□□ -1.71
XRN1-211ENST00000477237 ADAM8P78325 824 aa4.38□□□□□ -1.71
XRN1-211ENST00000477237 ELOA2Q8IYF1 753 aaPredicted RBP4.38□□□□□ -1.71
XRN1-211ENST00000477237 WDR48Q8TAF3 677 aa4.38□□□□□ -1.71
XRN1-211ENST00000477237 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.38□□□□□ -1.711e-11■■□□□ 14.1
XRN1-211ENST00000477237 RPL10LQ96L21 214 aaKnown RBP4.38□□□□□ -1.71
XRN1-211ENST00000477237 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.38□□□□□ -1.71
XRN1-211ENST00000477237 ATP23Q9Y6H3 246 aa4.38□□□□□ -1.71
XRN1-211ENST00000477237 POLR2AP24928 1970 aaKnown RBP4.37□□□□□ -1.71
XRN1-211ENST00000477237 PRAMEF25A6NGN4 478 aa4.37□□□□□ -1.71
XRN1-211ENST00000477237 SCAMP3O14828 347 aaKnown RBP4.37□□□□□ -1.71
XRN1-211ENST00000477237 ZNF185O15231 689 aa4.37□□□□□ -1.71
XRN1-211ENST00000477237 AMY2AP04746 511 aa4.37□□□□□ -1.71
XRN1-211ENST00000477237 AMY2BP19961 511 aa4.37□□□□□ -1.71
XRN1-211ENST00000477237 CTGFP29279 349 aa4.37□□□□□ -1.71
XRN1-211ENST00000477237 SLC10A6Q3KNW5 377 aa4.37□□□□□ -1.71
XRN1-211ENST00000477237 STYK1Q6J9G0 422 aa4.37□□□□□ -1.71
XRN1-211ENST00000477237 Q6YL49 198 aa4.37□□□□□ -1.71
XRN1-211ENST00000477237 METTL16Q86W50 562 aaKnown RBP4.37□□□□□ -1.71
XRN1-211ENST00000477237 PTRH1Q86Y79 214 aaKnown RBP4.37□□□□□ -1.71
XRN1-211ENST00000477237 ATXN2LQ8WWM7 1075 aaKnown RBP4.37□□□□□ -1.71
XRN1-211ENST00000477237 SLC6A15Q9H2J7 730 aa4.37□□□□□ -1.71
XRN1-211ENST00000477237 RSAD1Q9HA92 442 aa4.37□□□□□ -1.71
XRN1-211ENST00000477237 CYP4F11Q9HBI6 524 aa4.37□□□□□ -1.71
XRN1-211ENST00000477237 ACTR10Q9NZ32 417 aa4.37□□□□□ -1.71
XRN1-211ENST00000477237 TESQ9UGI8 421 aaKnown RBP4.37□□□□□ -1.71
XRN1-211ENST00000477237 STRIP2Q9ULQ0 834 aa4.37□□□□□ -1.71
XRN1-211ENST00000477237 UBE2QL1A1L167 161 aa4.36□□□□□ -1.71
XRN1-211ENST00000477237 BLACEA4D250 179 aa4.36□□□□□ -1.71
XRN1-211ENST00000477237 GOLGA6L6A8MZA4 724 aa4.36□□□□□ -1.71
XRN1-211ENST00000477237 HERVK_113P62684 666 aa4.36□□□□□ -1.71
XRN1-211ENST00000477237 GPR19Q15760 415 aa4.36□□□□□ -1.71
XRN1-211ENST00000477237 KRTAP1-5Q9BYS1 174 aa4.36□□□□□ -1.71
XRN1-211ENST00000477237 FRMD4BQ9Y2L6 1034 aa4.36□□□□□ -1.71
XRN1-211ENST00000477237 ASXL2Q76L83 1435 aa4.36□□□□□ -1.71
XRN1-211ENST00000477237 CENPVL1A0A0U1RR11 272 aa4.35□□□□□ -1.71
XRN1-211ENST00000477237 C2orf78A6NCI8 922 aa4.35□□□□□ -1.71
XRN1-211ENST00000477237 ZEB1P37275 1124 aaPredicted RBP4.35□□□□□ -1.71
XRN1-211ENST00000477237 PTH2RP49190 550 aa4.35□□□□□ -1.71
XRN1-211ENST00000477237 TAP1Q03518 808 aa4.35□□□□□ -1.71
XRN1-211ENST00000477237 TIGD2Q4W5G0 525 aa4.35□□□□□ -1.71
XRN1-211ENST00000477237 PLEKHG4Q58EX7 1191 aa4.35□□□□□ -1.71
XRN1-211ENST00000477237 FIGNQ5HY92 759 aa4.35□□□□□ -1.71
XRN1-211ENST00000477237 FKBP15Q5T1M5 1219 aa4.35□□□□□ -1.71
XRN1-211ENST00000477237 SP5Q6BEB4 398 aaPredicted RBP4.35□□□□□ -1.71
XRN1-211ENST00000477237 OSTM1Q86WC4 334 aa4.35□□□□□ -1.71
XRN1-211ENST00000477237 CXorf67Q86X51 503 aaPredicted RBP4.35□□□□□ -1.71
XRN1-211ENST00000477237 NT5DC4Q86YG4 428 aa4.35□□□□□ -1.71
XRN1-211ENST00000477237 MB21D1Q8N884 522 aa4.35□□□□□ -1.71
XRN1-211ENST00000477237 ANKRD53Q8N9V6 530 aa4.35□□□□□ -1.71
XRN1-211ENST00000477237 LPPQ93052 612 aa4.35□□□□□ -1.71
XRN1-211ENST00000477237 SLC7A6OSQ96CW6 309 aaPredicted RBP4.35□□□□□ -1.71
XRN1-211ENST00000477237 TCF25Q9BQ70 676 aa4.35□□□□□ -1.71
XRN1-211ENST00000477237 ALG1Q9BT22 464 aa4.35□□□□□ -1.71
XRN1-211ENST00000477237 SORCS3Q9UPU3 1222 aa4.35□□□□□ -1.71
XRN1-211ENST00000477237 VWA7Q9Y334 891 aa4.35□□□□□ -1.71
XRN1-211ENST00000477237 MRVI1Q9Y6F6 885 aa4.35□□□□□ -1.71
XRN1-211ENST00000477237 SETD1BQ9UPS6 1966 aaKnown RBP4.34□□□□□ -1.71
XRN1-211ENST00000477237 AGRPO00253 132 aa4.34□□□□□ -1.71
XRN1-211ENST00000477237 PRODHO43272 600 aa4.34□□□□□ -1.71
XRN1-211ENST00000477237 PPFIA4O75335 1185 aa4.34□□□□□ -1.71
XRN1-211ENST00000477237 RECKO95980 971 aa4.34□□□□□ -1.71
XRN1-211ENST00000477237 MMEP08473 750 aa4.34□□□□□ -1.71
XRN1-211ENST00000477237 BPIFB4P59827 614 aa4.34□□□□□ -1.71
XRN1-211ENST00000477237 SEC23AQ15436 765 aa4.34□□□□□ -1.71
XRN1-211ENST00000477237 KLHDC10Q6PID8 442 aa4.34□□□□□ -1.71
XRN1-211ENST00000477237 HDGFL2Q7Z4V5 671 aaPredicted RBP4.34□□□□□ -1.71
XRN1-211ENST00000477237 C9orf106Q8NAJ2 232 aa4.34□□□□□ -1.71
XRN1-211ENST00000477237 FAM98AQ8NCA5 519 aaKnown RBP4.34□□□□□ -1.71
XRN1-211ENST00000477237 CPT1CQ8TCG5 803 aa4.34□□□□□ -1.71
XRN1-211ENST00000477237 SCARB1Q8WTV0 552 aa4.34□□□□□ -1.71
XRN1-211ENST00000477237 OSBP2Q969R2 916 aa4.34□□□□□ -1.71
XRN1-211ENST00000477237 EPN3Q9H201 632 aa4.34□□□□□ -1.71
XRN1-211ENST00000477237 ZNF768Q9H5H4 540 aaKnown RBP4.34□□□□□ -1.71
XRN1-211ENST00000477237 RNF7Q9UBF6 113 aa4.34□□□□□ -1.71
XRN1-211ENST00000477237 RBM8AQ9Y5S9 174 aaKnown RBP4.34□□□□□ -1.71
XRN1-211ENST00000477237 COL3A1P02461 1466 aaPredicted RBP4.34□□□□□ -1.71
XRN1-211ENST00000477237 MYADML2A6NDP7 307 aa4.33□□□□□ -1.72
XRN1-211ENST00000477237 KCNK3O14649 394 aa4.33□□□□□ -1.72
XRN1-211ENST00000477237 LPXNO60711 386 aa4.33□□□□□ -1.72
XRN1-211ENST00000477237 TYRP1P17643 537 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms