RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 ROPN1BQ9BZX4 212 aaPredicted RBP14.94□□□□□ -0.02
HDAC1-206ENST00000476391 MAF1Q9H063 256 aa14.94□□□□□ -0.02
HDAC1-206ENST00000476391 CCDC113Q9H0I3 377 aa14.94□□□□□ -0.02
HDAC1-206ENST00000476391 RMI1Q9H9A7 625 aa14.94□□□□□ -0.02
HDAC1-206ENST00000476391 ROPN1Q9HAT0 212 aaPredicted RBP14.94□□□□□ -0.02
HDAC1-206ENST00000476391 TTC7AQ9ULT0 858 aaPredicted RBP14.94□□□□□ -0.02
HDAC1-206ENST00000476391 BZW2Q9Y6E2 419 aaKnown RBP14.94□□□□□ -0.02
HDAC1-206ENST00000476391 A0A087X0T9 212 aa14.94□□□□□ -0.02
HDAC1-206ENST00000476391 TRAFD1O14545 582 aaPredicted RBP14.94□□□□□ -0.02
HDAC1-206ENST00000476391 PFDN1O60925 122 aa14.94□□□□□ -0.02
HDAC1-206ENST00000476391 FAM228BP0C875 321 aa14.94□□□□□ -0.02
HDAC1-206ENST00000476391 RNASELQ05823 741 aaKnown RBP14.94□□□□□ -0.02
HDAC1-206ENST00000476391 MTFR1Q15390 333 aa14.94□□□□□ -0.02
HDAC1-206ENST00000476391 SNX30Q5VWJ9 437 aa14.94□□□□□ -0.02
HDAC1-206ENST00000476391 ZC3H18Q86VM9 953 aaKnown RBP14.94□□□□□ -0.02
HDAC1-206ENST00000476391 SCG3Q8WXD2 468 aaKnown RBP14.94□□□□□ -0.02
HDAC1-206ENST00000476391 HIC2Q96JB3 615 aa14.94□□□□□ -0.02
HDAC1-206ENST00000476391 USP40Q9NVE5 1235 aa14.94□□□□□ -0.02
HDAC1-206ENST00000476391 SLC4A4Q9Y6R1 1079 aa14.94□□□□□ -0.02
HDAC1-206ENST00000476391 FAM187AA6NFU0 413 aa14.93□□□□□ -0.02
HDAC1-206ENST00000476391 YARSP54577 528 aaKnown RBP14.93□□□□□ -0.02
HDAC1-206ENST00000476391 STK4Q13043 487 aa14.93□□□□□ -0.02
HDAC1-206ENST00000476391 LRRC14Q15048 493 aa14.93□□□□□ -0.02
HDAC1-206ENST00000476391 CCDC6Q16204 474 aa14.93□□□□□ -0.02
HDAC1-206ENST00000476391 SPDYAQ5MJ70 313 aa14.93□□□□□ -0.02
HDAC1-206ENST00000476391 CENPKQ9BS16 269 aa14.93□□□□□ -0.02
HDAC1-206ENST00000476391 CCSER1Q9C0I3 900 aa14.93□□□□□ -0.02
HDAC1-206ENST00000476391 DENND2DQ9H6A0 471 aaPredicted RBP14.93□□□□□ -0.02
HDAC1-206ENST00000476391 SPATA31A3Q5VYP0 1347 aa14.93□□□□□ -0.02
HDAC1-206ENST00000476391 TMEM120BA0PK00 339 aa14.93□□□□□ -0.02
HDAC1-206ENST00000476391 ATP5DP30049 168 aa14.93□□□□□ -0.02
HDAC1-206ENST00000476391 POLGP54098 1239 aaPredicted RBP14.93□□□□□ -0.02
HDAC1-206ENST00000476391 BPIFB4P59827 614 aa14.93□□□□□ -0.02
HDAC1-206ENST00000476391 PTENP60484 403 aa14.93□□□□□ -0.02
HDAC1-206ENST00000476391 USP46P62068 366 aa14.93□□□□□ -0.02
HDAC1-206ENST00000476391 KCNMA1Q12791 1236 aa14.93□□□□□ -0.02
HDAC1-206ENST00000476391 GPIHBP1Q8IV16 184 aa14.93□□□□□ -0.02
HDAC1-206ENST00000476391 TTC8Q8TAM2 541 aa14.93□□□□□ -0.02
HDAC1-206ENST00000476391 EPS8L3Q8TE67 593 aaKnown RBP14.93□□□□□ -0.02
HDAC1-206ENST00000476391 STRBPQ96SI9 672 aaKnown RBP14.93□□□□□ -0.02
HDAC1-206ENST00000476391 TRIM51Q9BSJ1 452 aa14.93□□□□□ -0.02
HDAC1-206ENST00000476391 PACSIN1Q9BY11 444 aa14.93□□□□□ -0.02
HDAC1-206ENST00000476391 PHACTR1Q9C0D0 580 aa14.93□□□□□ -0.02
HDAC1-206ENST00000476391 NAPBQ9H115 298 aa14.93□□□□□ -0.02
HDAC1-206ENST00000476391 MYLK2Q9H1R3 596 aa14.93□□□□□ -0.02
HDAC1-206ENST00000476391 SUCLA2Q9P2R7 463 aaPredicted RBP14.93□□□□□ -0.02
HDAC1-206ENST00000476391 ABCF2Q9UG63 623 aa14.93□□□□□ -0.02
HDAC1-206ENST00000476391 WDR37Q9Y2I8 494 aa14.93□□□□□ -0.02
HDAC1-206ENST00000476391 DAAM1Q9Y4D1 1078 aa14.93□□□□□ -0.02
HDAC1-206ENST00000476391 AKAP11Q9UKA4 1901 aa14.93□□□□□ -0.02
HDAC1-206ENST00000476391 RTL9Q8NET4 1388 aa14.92□□□□□ -0.02
HDAC1-206ENST00000476391 MAFGO15525 162 aa14.92□□□□□ -0.02
HDAC1-206ENST00000476391 ENTPD5O75356 428 aa14.92□□□□□ -0.02
HDAC1-206ENST00000476391 MPP3Q13368 585 aa14.92□□□□□ -0.02
HDAC1-206ENST00000476391 SLC39A6Q13433 755 aa14.92□□□□□ -0.02
HDAC1-206ENST00000476391 RASA3Q14644 834 aa14.92□□□□□ -0.02
HDAC1-206ENST00000476391 FAM83BQ5T0W9 1011 aa14.92□□□□□ -0.02
HDAC1-206ENST00000476391 CNNM4Q6P4Q7 775 aa14.92□□□□□ -0.02
HDAC1-206ENST00000476391 DAAM2Q86T65 1068 aa14.92□□□□□ -0.02
HDAC1-206ENST00000476391 C4orf32Q8N8J7 132 aa14.92□□□□□ -0.02
HDAC1-206ENST00000476391 PPFIBP2Q8ND30 876 aa14.92□□□□□ -0.02
HDAC1-206ENST00000476391 CCDC97Q96F63 343 aaPredicted RBP14.92□□□□□ -0.02
HDAC1-206ENST00000476391 ZNF594Q96JF6 807 aaPredicted RBP14.92□□□□□ -0.02
HDAC1-206ENST00000476391 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.92□□□□□ -0.02
HDAC1-206ENST00000476391 YIPF2Q9BWQ6 316 aa14.92□□□□□ -0.02
HDAC1-206ENST00000476391 TRIM31Q9BZY9 425 aa14.92□□□□□ -0.02
HDAC1-206ENST00000476391 SEMA6BQ9H3T3 888 aa14.92□□□□□ -0.02
HDAC1-206ENST00000476391 TLE6Q9H808 572 aa14.92□□□□□ -0.02
HDAC1-206ENST00000476391 IL1RAPL1Q9NZN1 696 aa14.92□□□□□ -0.02
HDAC1-206ENST00000476391 INTUQ9ULD6 942 aa14.92□□□□□ -0.02
HDAC1-206ENST00000476391 RPTORQ8N122 1335 aa14.92□□□□□ -0.02
HDAC1-206ENST00000476391 RBM47A0AV96 593 aaKnown RBP14.92□□□□□ -0.02
HDAC1-206ENST00000476391 PRDM1O75626 825 aa14.92□□□□□ -0.02
HDAC1-206ENST00000476391 UBA7P41226 1012 aa14.92□□□□□ -0.02
HDAC1-206ENST00000476391 FUT2Q10981 343 aa14.92□□□□□ -0.02
HDAC1-206ENST00000476391 LIN52Q52LA3 116 aa14.92□□□□□ -0.02
HDAC1-206ENST00000476391 CGB2Q6NT52 195 aa14.92□□□□□ -0.02
HDAC1-206ENST00000476391 PIK3AP1Q6ZUJ8 805 aa14.92□□□□□ -0.02
HDAC1-206ENST00000476391 SLFN11Q7Z7L1 901 aa14.92□□□□□ -0.02
HDAC1-206ENST00000476391 IFNL3Q8IZI9 196 aa14.92□□□□□ -0.02
HDAC1-206ENST00000476391 SLC7A6OSQ96CW6 309 aaPredicted RBP14.92□□□□□ -0.02
HDAC1-206ENST00000476391 MAGEB18Q96M61 343 aa14.92□□□□□ -0.02
HDAC1-206ENST00000476391 OLFM3Q96PB7 478 aa14.92□□□□□ -0.02
HDAC1-206ENST00000476391 TGS1Q96RS0 853 aaKnown RBP14.92□□□□□ -0.02
HDAC1-206ENST00000476391 ZKSCAN3Q9BRR0 538 aa14.92□□□□□ -0.02
HDAC1-206ENST00000476391 PICK1Q9NRD5 415 aa14.92□□□□□ -0.02
HDAC1-206ENST00000476391 ADAMTS1Q9UHI8 967 aa14.92□□□□□ -0.02
HDAC1-206ENST00000476391 ADAMTS7Q9UKP4 1686 aa14.92□□□□□ -0.02
HDAC1-206ENST00000476391 POTEFA5A3E0 1075 aa14.91□□□□□ -0.02
HDAC1-206ENST00000476391 TMEM221A6NGB7 291 aa14.91□□□□□ -0.02
HDAC1-206ENST00000476391 LGR5O75473 907 aa14.91□□□□□ -0.02
HDAC1-206ENST00000476391 GNA14O95837 355 aa14.91□□□□□ -0.02
HDAC1-206ENST00000476391 POTEIP0CG38 1075 aa14.91□□□□□ -0.02
HDAC1-206ENST00000476391 POTEJP0CG39 1038 aa14.91□□□□□ -0.02
HDAC1-206ENST00000476391 MARK3P27448 753 aa14.91□□□□□ -0.02
HDAC1-206ENST00000476391 DR1Q01658 176 aa14.91□□□□□ -0.02
HDAC1-206ENST00000476391 DHX34Q14147 1143 aaKnown RBP14.91□□□□□ -0.02
HDAC1-206ENST00000476391 GIT2Q14161 759 aa14.91□□□□□ -0.02
HDAC1-206ENST00000476391 MAP7Q14244 749 aa14.91□□□□□ -0.02
HDAC1-206ENST00000476391 ZNF790Q6PG37 636 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms