RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 ZRSR1Q15695 479 aaKnown RBP32.97■■■□□ 2.87
HOXB3-208ENST00000476342 ECM1Q16610 540 aa32.97■■■□□ 2.87
HOXB3-208ENST00000476342 HYIQ5T013 277 aa32.97■■■□□ 2.87
HOXB3-208ENST00000476342 IER5Q5VY09 327 aa32.97■■■□□ 2.87
HOXB3-208ENST00000476342 CALML4Q96GE6 196 aa32.97■■■□□ 2.87
HOXB3-208ENST00000476342 GDF15Q99988 308 aa32.97■■■□□ 2.87
HOXB3-208ENST00000476342 DNM2P50570 870 aa32.96■■■□□ 2.87
HOXB3-208ENST00000476342 CLCN3P51790 818 aa32.96■■■□□ 2.87
HOXB3-208ENST00000476342 KIAA0319LQ8IZA0 1049 aa32.96■■■□□ 2.87
HOXB3-208ENST00000476342 LRRC71Q8N4P6 559 aa32.96■■■□□ 2.87
HOXB3-208ENST00000476342 CLIC6Q96NY7 704 aa32.96■■■□□ 2.87
HOXB3-208ENST00000476342 DHX33Q9H6R0 707 aaKnown RBP32.96■■■□□ 2.87
HOXB3-208ENST00000476342 SCN5AQ14524 2016 aa32.96■■■□□ 2.87
HOXB3-208ENST00000476342 IGKV6-21A0A0C4DH24 114 aa32.95■■■□□ 2.87
HOXB3-208ENST00000476342 GAS2O43903 313 aaKnown RBP32.95■■■□□ 2.87
HOXB3-208ENST00000476342 MRPS6P82932 125 aaKnown RBP32.95■■■□□ 2.87
HOXB3-208ENST00000476342 FAM26DQ5JW98 314 aa32.95■■■□□ 2.87
HOXB3-208ENST00000476342 TRAF7Q6Q0C0 670 aa32.95■■■□□ 2.87
HOXB3-208ENST00000476342 RPUSD2Q8IZ73 545 aaKnown RBP32.95■■■□□ 2.87
HOXB3-208ENST00000476342 LINC01465Q8N7H1 131 aa32.95■■■□□ 2.87
HOXB3-208ENST00000476342 ZNF579Q8NAF0 562 aaKnown RBP32.95■■■□□ 2.87
HOXB3-208ENST00000476342 RASSF8Q8NHQ8 419 aa32.95■■■□□ 2.87
HOXB3-208ENST00000476342 DNM3Q9UQ16 869 aa32.95■■■□□ 2.87
HOXB3-208ENST00000476342 DGAT1O75907 488 aa32.94■■■□□ 2.86
HOXB3-208ENST00000476342 TXLNAP40222 546 aa32.94■■■□□ 2.86
HOXB3-208ENST00000476342 AKT3Q9Y243 479 aa32.94■■■□□ 2.86
HOXB3-208ENST00000476342 TCHHQ07283 1943 aa32.94■■■□□ 2.86
HOXB3-208ENST00000476342 A0A087WWV3 80 aa32.94■■■□□ 2.86
HOXB3-208ENST00000476342 PFKMP08237 780 aa32.94■■■□□ 2.86
HOXB3-208ENST00000476342 EMC2Q15006 297 aa32.94■■■□□ 2.86
HOXB3-208ENST00000476342 ZNF710Q8N1W2 664 aa32.94■■■□□ 2.86
HOXB3-208ENST00000476342 UBE2OQ9C0C9 1292 aaKnown RBP32.94■■■□□ 2.86
HOXB3-208ENST00000476342 CCSER1Q9C0I3 900 aa32.94■■■□□ 2.86
HOXB3-208ENST00000476342 IL23AQ9NPF7 189 aa32.94■■■□□ 2.86
HOXB3-208ENST00000476342 ARHGEF35A5YM69 484 aa32.93■■■□□ 2.86
HOXB3-208ENST00000476342 TMEM62Q0P6H9 643 aa32.93■■■□□ 2.86
HOXB3-208ENST00000476342 SPECC1Q5M775 1068 aa32.93■■■□□ 2.86
HOXB3-208ENST00000476342 MTRQ99707 1265 aa32.93■■■□□ 2.86
HOXB3-208ENST00000476342 ATP6V0A4Q9HBG4 840 aa32.93■■■□□ 2.86
HOXB3-208ENST00000476342 RCOR1Q9UKL0 485 aa32.93■■■□□ 2.86
HOXB3-208ENST00000476342 TRPV2Q9Y5S1 764 aa32.93■■■□□ 2.86
HOXB3-208ENST00000476342 CDY2AQ9Y6F7 541 aa32.93■■■□□ 2.86
HOXB3-208ENST00000476342 MGAT3Q09327 533 aa32.92■■■□□ 2.86
HOXB3-208ENST00000476342 GRB10Q13322 594 aa32.92■■■□□ 2.86
HOXB3-208ENST00000476342 CHRDL2Q6WN34 429 aa32.92■■■□□ 2.86
HOXB3-208ENST00000476342 DEFB128Q7Z7B8 93 aa32.92■■■□□ 2.86
HOXB3-208ENST00000476342 SYMPKQ92797 1274 aaKnown RBP32.92■■■□□ 2.86
HOXB3-208ENST00000476342 SPATA32Q96LK8 384 aa32.92■■■□□ 2.86
HOXB3-208ENST00000476342 PNMA5Q96PV4 448 aa32.92■■■□□ 2.86
HOXB3-208ENST00000476342 BHMT2Q9H2M3 363 aa32.92■■■□□ 2.86
HOXB3-208ENST00000476342 SIP14410 1827 aa32.91■■■□□ 2.86
HOXB3-208ENST00000476342 CUTAO60888 179 aa32.91■■■□□ 2.86
HOXB3-208ENST00000476342 EYA4O95677 639 aa32.91■■■□□ 2.86
HOXB3-208ENST00000476342 CHRNA1P02708 482 aa32.91■■■□□ 2.86
HOXB3-208ENST00000476342 VTNP04004 478 aa32.91■■■□□ 2.86
HOXB3-208ENST00000476342 BMP8BP34820 402 aa32.91■■■□□ 2.86
HOXB3-208ENST00000476342 ME1P48163 572 aa32.91■■■□□ 2.86
HOXB3-208ENST00000476342 TMEM119Q4V9L6 283 aa32.91■■■□□ 2.86
HOXB3-208ENST00000476342 PSRC1Q6PGN9 363 aaPredicted RBP32.91■■■□□ 2.86
HOXB3-208ENST00000476342 TCP11Q8WWU5 503 aa32.91■■■□□ 2.86
HOXB3-208ENST00000476342 EPSTI1Q96J88 318 aa32.91■■■□□ 2.86
HOXB3-208ENST00000476342 CELF4Q9BZC1 486 aaKnown RBP32.91■■■□□ 2.86
HOXB3-208ENST00000476342 SCAND2PQ9GZW5 306 aaPredicted RBP32.91■■■□□ 2.86
HOXB3-208ENST00000476342 BMP2KQ9NSY1 1161 aaPredicted RBP32.91■■■□□ 2.86
HOXB3-208ENST00000476342 CCDC39Q9UFE4 941 aa32.91■■■□□ 2.86
HOXB3-208ENST00000476342 E9PMD0 336 aa32.9■■■□□ 2.86
HOXB3-208ENST00000476342 CHMP5Q9NZZ3 219 aa32.9■■■□□ 2.86
HOXB3-208ENST00000476342 USO1O60763 962 aaKnown RBP32.89■■■□□ 2.86
HOXB3-208ENST00000476342 NBNO60934 754 aa32.89■■■□□ 2.86
HOXB3-208ENST00000476342 CDC42EP1Q00587 391 aa32.89■■■□□ 2.86
HOXB3-208ENST00000476342 MBTPS1Q14703 1052 aa32.89■■■□□ 2.86
HOXB3-208ENST00000476342 KARSQ15046 597 aaKnown RBP32.89■■■□□ 2.86
HOXB3-208ENST00000476342 IPO9Q96P70 1041 aaKnown RBP32.89■■■□□ 2.86
HOXB3-208ENST00000476342 PLIN2Q99541 437 aa32.89■■■□□ 2.86
HOXB3-208ENST00000476342 SUCLA2Q9P2R7 463 aaPredicted RBP32.89■■■□□ 2.86
HOXB3-208ENST00000476342 CXCL10P02778 98 aa32.88■■■□□ 2.85
HOXB3-208ENST00000476342 MKRN4PQ13434 485 aaPredicted RBP32.88■■■□□ 2.85
HOXB3-208ENST00000476342 DRP2Q13474 957 aa32.88■■■□□ 2.85
HOXB3-208ENST00000476342 PADI6Q6TGC4 694 aa32.88■■■□□ 2.85
HOXB3-208ENST00000476342 USP49Q70CQ1 688 aa32.88■■■□□ 2.85
HOXB3-208ENST00000476342 MCPH1Q8NEM0 835 aa32.88■■■□□ 2.85
HOXB3-208ENST00000476342 LEO1Q8WVC0 666 aaPredicted RBP32.88■■■□□ 2.85
HOXB3-208ENST00000476342 PSPC1Q8WXF1 523 aaKnown RBP32.88■■■□□ 2.85
HOXB3-208ENST00000476342 GINS2Q9Y248 185 aa32.88■■■□□ 2.85
HOXB3-208ENST00000476342 ACRP10323 421 aa32.87■■■□□ 2.85
HOXB3-208ENST00000476342 KCNK18Q7Z418 384 aa32.87■■■□□ 2.85
HOXB3-208ENST00000476342 CHAMP1Q96JM3 812 aa32.87■■■□□ 2.85
HOXB3-208ENST00000476342 XPNPEP1Q9NQW7 623 aa32.87■■■□□ 2.85
HOXB3-208ENST00000476342 PCDHA7Q9UN72 937 aa32.87■■■□□ 2.85
HOXB3-208ENST00000476342 TET1Q8NFU7 2136 aa32.87■■■□□ 2.85
HOXB3-208ENST00000476342 PLCG1P19174 1290 aa32.86■■■□□ 2.85
HOXB3-208ENST00000476342 EPHB4P54760 987 aa32.86■■■□□ 2.85
HOXB3-208ENST00000476342 NLRP11P59045 1033 aaKnown RBP32.86■■■□□ 2.85
HOXB3-208ENST00000476342 GPNMBQ14956 572 aa32.86■■■□□ 2.85
HOXB3-208ENST00000476342 KIZQ2M2Z5 673 aa32.86■■■□□ 2.85
HOXB3-208ENST00000476342 TMEM143Q96AN5 459 aa32.86■■■□□ 2.85
HOXB3-208ENST00000476342 SCLT1Q96NL6 688 aa32.86■■■□□ 2.85
HOXB3-208ENST00000476342 PPP1R16BQ96T49 567 aa32.86■■■□□ 2.85
HOXB3-208ENST00000476342 SQORQ9Y6N5 450 aa32.86■■■□□ 2.85
HOXB3-208ENST00000476342 GPR32O75388 356 aa32.85■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms