RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 RASGRP4Q8TDF6 673 aa14.87□□□□□ -0.03
MRPL55-228ENST00000476267 CCDC12Q8WUD4 166 aaPredicted RBP14.87□□□□□ -0.03
MRPL55-228ENST00000476267 PHKBQ93100 1093 aa14.87□□□□□ -0.03
MRPL55-228ENST00000476267 JAKMIP1Q96N16 626 aaKnown RBP14.87□□□□□ -0.03
MRPL55-228ENST00000476267 ELAC1Q9H777 363 aaKnown RBP14.87□□□□□ -0.03
MRPL55-228ENST00000476267 RNF19AQ9NV58 838 aa14.87□□□□□ -0.03
MRPL55-228ENST00000476267 TMEM161AQ9NX61 479 aa14.87□□□□□ -0.03
MRPL55-228ENST00000476267 LRFN2Q9ULH4 789 aa14.87□□□□□ -0.03
MRPL55-228ENST00000476267 PCDHA10Q9Y5I2 948 aa14.87□□□□□ -0.03
MRPL55-228ENST00000476267 DENND3A2RUS2 1198 aa14.86□□□□□ -0.03
MRPL55-228ENST00000476267 TBKBP1A7MCY6 615 aa14.86□□□□□ -0.03
MRPL55-228ENST00000476267 FSCN2O14926 492 aa14.86□□□□□ -0.03
MRPL55-228ENST00000476267 ZNF862O60290 1169 aa14.86□□□□□ -0.03
MRPL55-228ENST00000476267 PSAPP07602 524 aa14.86□□□□□ -0.03
MRPL55-228ENST00000476267 RPS6KB1P23443 525 aa14.86□□□□□ -0.03
MRPL55-228ENST00000476267 GNA11P29992 359 aa14.86□□□□□ -0.03
MRPL55-228ENST00000476267 NRIP1P48552 1158 aa14.86□□□□□ -0.03
MRPL55-228ENST00000476267 NDUFV1P49821 464 aa14.86□□□□□ -0.03
MRPL55-228ENST00000476267 KCNC3Q14003 757 aa14.86□□□□□ -0.03
MRPL55-228ENST00000476267 PRR16Q569H4 304 aa14.86□□□□□ -0.03
MRPL55-228ENST00000476267 ODR4Q5SWX8 454 aa14.86□□□□□ -0.03
MRPL55-228ENST00000476267 RNF135Q8IUD6 432 aa14.86□□□□□ -0.03
MRPL55-228ENST00000476267 VN1R2Q8NFZ6 395 aa14.86□□□□□ -0.03
MRPL55-228ENST00000476267 PPP2R3CQ969Q6 453 aa14.86□□□□□ -0.03
MRPL55-228ENST00000476267 PPP1R16BQ96T49 567 aa14.86□□□□□ -0.03
MRPL55-228ENST00000476267 POP1Q99575 1024 aaKnown RBP14.86□□□□□ -0.03
MRPL55-228ENST00000476267 RNF26Q9BY78 433 aaPredicted RBP14.86□□□□□ -0.03
MRPL55-228ENST00000476267 ADAMTS10Q9H324 1103 aa14.86□□□□□ -0.03
MRPL55-228ENST00000476267 GABBR1Q9UBS5 961 aa14.86□□□□□ -0.03
MRPL55-228ENST00000476267 LOC730098B7Z3J9 87 aa14.85□□□□□ -0.03
MRPL55-228ENST00000476267 MSH4O15457 936 aa14.85□□□□□ -0.03
MRPL55-228ENST00000476267 FGF18O76093 207 aa14.85□□□□□ -0.03
MRPL55-228ENST00000476267 FGFR1P11362 822 aa14.85□□□□□ -0.03
MRPL55-228ENST00000476267 IFNAR1P17181 557 aa14.85□□□□□ -0.03
MRPL55-228ENST00000476267 CLCN3P51790 818 aa14.85□□□□□ -0.03
MRPL55-228ENST00000476267 CBX2Q14781 532 aaPredicted RBP14.85□□□□□ -0.03
MRPL55-228ENST00000476267 BLOC1S2Q6QNY1 142 aa14.85□□□□□ -0.03
MRPL55-228ENST00000476267 LRRC55Q6ZSA7 311 aa14.85□□□□□ -0.03
MRPL55-228ENST00000476267 COLGALT1Q8NBJ5 622 aa14.85□□□□□ -0.03
MRPL55-228ENST00000476267 UPF3BQ9BZI7 483 aaKnown RBP14.85□□□□□ -0.03
MRPL55-228ENST00000476267 TYW1Q9NV66 732 aaKnown RBP14.85□□□□□ -0.03
MRPL55-228ENST00000476267 RNF216Q9NWF9 866 aaPredicted RBP14.85□□□□□ -0.03
MRPL55-228ENST00000476267 MUTYHQ9UIF7 546 aa14.85□□□□□ -0.03
MRPL55-228ENST00000476267 NAP1L2Q9ULW6 460 aaPredicted RBP14.85□□□□□ -0.03
MRPL55-228ENST00000476267 BARX2Q9UMQ3 279 aaPredicted RBP14.85□□□□□ -0.03
MRPL55-228ENST00000476267 CEP131Q9UPN4 1083 aa14.85□□□□□ -0.03
MRPL55-228ENST00000476267 WDR64B1ANS9 1081 aa14.84□□□□□ -0.03
MRPL55-228ENST00000476267 MAGEB2O15479 319 aa14.84□□□□□ -0.03
MRPL55-228ENST00000476267 ERVFC1P60507 584 aa14.84□□□□□ -0.03
MRPL55-228ENST00000476267 FGD1P98174 961 aa14.84□□□□□ -0.03
MRPL55-228ENST00000476267 RBM10P98175 930 aaKnown RBP14.84□□□□□ -0.03
MRPL55-228ENST00000476267 PLCB3Q01970 1234 aa14.84□□□□□ -0.03
MRPL55-228ENST00000476267 UGCGQ16739 394 aa14.84□□□□□ -0.03
MRPL55-228ENST00000476267 DUSP6Q16828 381 aa14.84□□□□□ -0.03
MRPL55-228ENST00000476267 B3GNT9Q6UX72 402 aa14.84□□□□□ -0.03
MRPL55-228ENST00000476267 HFE2Q6ZVN8 426 aa14.84□□□□□ -0.03
MRPL55-228ENST00000476267 RBM23Q86U06 439 aaKnown RBP14.84□□□□□ -0.03
MRPL55-228ENST00000476267 CKAP2LQ8IYA6 745 aa14.84□□□□□ -0.03
MRPL55-228ENST00000476267 SLC5A5Q92911 643 aa14.84□□□□□ -0.03
MRPL55-228ENST00000476267 FAM167AQ96KS9 214 aa14.84□□□□□ -0.03
MRPL55-228ENST00000476267 CASD1Q96PB1 797 aa14.84□□□□□ -0.03
MRPL55-228ENST00000476267 CEP89Q96ST8 783 aa14.84□□□□□ -0.03
MRPL55-228ENST00000476267 TLR9Q9NR96 1032 aa14.84□□□□□ -0.03
MRPL55-228ENST00000476267 LZTS1Q9Y250 596 aa14.84□□□□□ -0.03
MRPL55-228ENST00000476267 PCDHB12Q9Y5F1 795 aa14.84□□□□□ -0.03
MRPL55-228ENST00000476267 M0R2N6 131 aa14.83□□□□□ -0.04
MRPL55-228ENST00000476267 PPFIA3O75145 1194 aa14.83□□□□□ -0.04
MRPL55-228ENST00000476267 STBD1O95210 358 aa14.83□□□□□ -0.04
MRPL55-228ENST00000476267 OATP04181 439 aa14.83□□□□□ -0.04
MRPL55-228ENST00000476267 EIF4BP23588 611 aaKnown RBP14.83□□□□□ -0.04
MRPL55-228ENST00000476267 PDIA3P30101 505 aaKnown RBP14.83□□□□□ -0.04
MRPL55-228ENST00000476267 GPC3P51654 580 aa14.83□□□□□ -0.04
MRPL55-228ENST00000476267 USP11P51784 963 aa14.83□□□□□ -0.04
MRPL55-228ENST00000476267 NLRP11P59045 1033 aaKnown RBP14.83□□□□□ -0.04
MRPL55-228ENST00000476267 PRKCEQ02156 737 aa14.83□□□□□ -0.04
MRPL55-228ENST00000476267 TARBP2Q15633 366 aaKnown RBP14.83□□□□□ -0.04
MRPL55-228ENST00000476267 CSPP1Q1MSJ5 1256 aa14.83□□□□□ -0.04
MRPL55-228ENST00000476267 EFCAB12Q6NXP0 572 aa14.83□□□□□ -0.04
MRPL55-228ENST00000476267 TMEM184AQ6ZMB5 413 aa14.83□□□□□ -0.04
MRPL55-228ENST00000476267 TRMT1LQ7Z2T5 733 aaKnown RBP14.83□□□□□ -0.04
MRPL55-228ENST00000476267 LRRC71Q8N4P6 559 aa14.83□□□□□ -0.04
MRPL55-228ENST00000476267 METTL13Q8N6R0 699 aa14.83□□□□□ -0.04
MRPL55-228ENST00000476267 CCDC148Q8NFR7 591 aa14.83□□□□□ -0.04
MRPL55-228ENST00000476267 BICD2Q8TD16 824 aa14.83□□□□□ -0.04
MRPL55-228ENST00000476267 SUSD6Q92537 303 aa14.83□□□□□ -0.04
MRPL55-228ENST00000476267 RIT2Q99578 217 aa14.83□□□□□ -0.04
MRPL55-228ENST00000476267 TMEM117Q9H0C3 514 aa14.83□□□□□ -0.04
MRPL55-228ENST00000476267 KCNH6Q9H252 994 aa14.83□□□□□ -0.04
MRPL55-228ENST00000476267 ATP6V0A4Q9HBG4 840 aa14.83□□□□□ -0.04
MRPL55-228ENST00000476267 AAASQ9NRG9 546 aa14.83□□□□□ -0.04
MRPL55-228ENST00000476267 DISC1Q9NRI5 854 aa14.83□□□□□ -0.04
MRPL55-228ENST00000476267 VPS54Q9P1Q0 977 aa14.83□□□□□ -0.04
MRPL55-228ENST00000476267 USP15Q9Y4E8 981 aaPredicted RBP14.83□□□□□ -0.04
MRPL55-228ENST00000476267 KMT2EQ8IZD2 1858 aa14.82□□□□□ -0.04
MRPL55-228ENST00000476267 PER2O15055 1255 aa14.82□□□□□ -0.04
MRPL55-228ENST00000476267 PSMD10O75832 226 aa14.82□□□□□ -0.04
MRPL55-228ENST00000476267 ATF7P17544 494 aaPredicted RBP14.82□□□□□ -0.04
MRPL55-228ENST00000476267 LAG3P18627 525 aa14.82□□□□□ -0.04
MRPL55-228ENST00000476267 IBSPP21815 317 aaPredicted RBP14.82□□□□□ -0.04
MRPL55-228ENST00000476267 TOB2Q14106 344 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms