RNA–Protein interactions for RNA: ENST00000476089.1

ITGA4-207, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-207ENST00000476089 TELO2Q9Y4R8 837 aa22.55■■□□□ 1.2
ITGA4-207ENST00000476089 MYH9P35579 1960 aaKnown RBP22.55■■□□□ 1.2
ITGA4-207ENST00000476089 LRRC37A2A6NM11 1700 aa22.55■■□□□ 1.2
ITGA4-207ENST00000476089 ARHGAP6O43182 974 aa22.54■■□□□ 1.2
ITGA4-207ENST00000476089 KCNA1Q09470 495 aa22.54■■□□□ 1.2
ITGA4-207ENST00000476089 LY6KQ17RY6 165 aa22.54■■□□□ 1.2
ITGA4-207ENST00000476089 RETREG2Q8NC44 543 aa22.54■■□□□ 1.2
ITGA4-207ENST00000476089 GOLGA5Q8TBA6 731 aa22.54■■□□□ 1.2
ITGA4-207ENST00000476089 MORC4Q8TE76 937 aa22.54■■□□□ 1.2
ITGA4-207ENST00000476089 ERGIC2Q96RQ1 377 aa22.54■■□□□ 1.2
ITGA4-207ENST00000476089 PTPN18Q99952 460 aa22.54■■□□□ 1.2
ITGA4-207ENST00000476089 NAA15Q9BXJ9 866 aaKnown RBP22.54■■□□□ 1.2
ITGA4-207ENST00000476089 MAFBQ9Y5Q3 323 aaPredicted RBP22.54■■□□□ 1.2
ITGA4-207ENST00000476089 DGAT1O75907 488 aa22.54■■□□□ 1.2
ITGA4-207ENST00000476089 NR3C1P04150 777 aa22.54■■□□□ 1.2
ITGA4-207ENST00000476089 ADORA2AP29274 412 aa22.54■■□□□ 1.2
ITGA4-207ENST00000476089 FXR1P51114 621 aaKnown RBP eCLIP22.54■■□□□ 1.2
ITGA4-207ENST00000476089 SYCP1Q15431 976 aa22.54■■□□□ 1.2
ITGA4-207ENST00000476089 FAM160B1Q5W0V3 765 aa22.54■■□□□ 1.2
ITGA4-207ENST00000476089 SYCP3Q8IZU3 236 aa22.54■■□□□ 1.2
ITGA4-207ENST00000476089 SEPT1Q8WYJ6 367 aa22.54■■□□□ 1.2
ITGA4-207ENST00000476089 KIFAP3Q92845 792 aa22.54■■□□□ 1.2
ITGA4-207ENST00000476089 CYP26B1Q9NR63 512 aa22.54■■□□□ 1.2
ITGA4-207ENST00000476089 DDX41Q9UJV9 622 aaKnown RBP22.54■■□□□ 1.2
ITGA4-207ENST00000476089 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.54■■□□□ 1.2
ITGA4-207ENST00000476089 OFD1O75665 1012 aa22.53■■□□□ 1.2
ITGA4-207ENST00000476089 STBD1O95210 358 aa22.53■■□□□ 1.2
ITGA4-207ENST00000476089 TRIM21P19474 475 aaKnown RBP22.53■■□□□ 1.2
ITGA4-207ENST00000476089 FAM110CQ1W6H9 321 aa22.53■■□□□ 1.2
ITGA4-207ENST00000476089 FRMD5Q7Z6J6 570 aa22.53■■□□□ 1.2
ITGA4-207ENST00000476089 MCPH1Q8NEM0 835 aa22.53■■□□□ 1.2
ITGA4-207ENST00000476089 IQCDQ96DY2 449 aa22.53■■□□□ 1.2
ITGA4-207ENST00000476089 GBP3Q9H0R5 595 aa22.53■■□□□ 1.2
ITGA4-207ENST00000476089 TMEM206Q9H813 350 aa22.53■■□□□ 1.2
ITGA4-207ENST00000476089 FAM184BQ9ULE4 1060 aa22.53■■□□□ 1.2
ITGA4-207ENST00000476089 TGFB1I1O43294 461 aa22.52■■□□□ 1.2
ITGA4-207ENST00000476089 CCP110O43303 1012 aa22.52■■□□□ 1.2
ITGA4-207ENST00000476089 OATP04181 439 aa22.52■■□□□ 1.2
ITGA4-207ENST00000476089 EPB41P11171 864 aaKnown RBP22.52■■□□□ 1.2
ITGA4-207ENST00000476089 SMTNP53814 917 aa22.52■■□□□ 1.2
ITGA4-207ENST00000476089 NFIL3Q16649 462 aa22.52■■□□□ 1.2
ITGA4-207ENST00000476089 TSR1Q2NL82 804 aaKnown RBP22.52■■□□□ 1.2
ITGA4-207ENST00000476089 TMEM139Q8IV31 216 aa22.52■■□□□ 1.2
ITGA4-207ENST00000476089 FBXO16Q8IX29 292 aaPredicted RBP22.52■■□□□ 1.2
ITGA4-207ENST00000476089 STRA6Q9BX79 667 aa22.52■■□□□ 1.2
ITGA4-207ENST00000476089 KCND1Q9NSA2 647 aa22.52■■□□□ 1.2
ITGA4-207ENST00000476089 LUC7L2Q9Y383 392 aaKnown RBP22.52■■□□□ 1.2
ITGA4-207ENST00000476089 IGKV6D-21A0A0A0MT36 114 aa22.52■■□□□ 1.2
ITGA4-207ENST00000476089 GSTTP1A0A1W2PQM5 241 aa22.52■■□□□ 1.2
ITGA4-207ENST00000476089 MANSC4A6NHS7 340 aaPredicted RBP22.52■■□□□ 1.2
ITGA4-207ENST00000476089 CLIC2O15247 247 aa22.52■■□□□ 1.2
ITGA4-207ENST00000476089 SLC16A3O15427 465 aaKnown RBP22.52■■□□□ 1.2
ITGA4-207ENST00000476089 PPP1R37O75864 691 aa22.52■■□□□ 1.2
ITGA4-207ENST00000476089 KRT9P35527 623 aa22.52■■□□□ 1.2
ITGA4-207ENST00000476089 PEX3P56589 373 aa22.52■■□□□ 1.2
ITGA4-207ENST00000476089 DMP1Q13316 513 aaPredicted RBP22.52■■□□□ 1.2
ITGA4-207ENST00000476089 ZNF792Q3KQV3 632 aa22.52■■□□□ 1.2
ITGA4-207ENST00000476089 KSR1Q8IVT5 923 aa22.52■■□□□ 1.2
ITGA4-207ENST00000476089 TRIM59Q8IWR1 403 aa22.52■■□□□ 1.2
ITGA4-207ENST00000476089 CCAR2Q8N163 923 aaKnown RBP22.52■■□□□ 1.2
ITGA4-207ENST00000476089 ACCSQ96QU6 501 aa22.52■■□□□ 1.2
ITGA4-207ENST00000476089 AZI2Q9H6S1 392 aa22.52■■□□□ 1.2
ITGA4-207ENST00000476089 C17orf75Q9HAS0 396 aa22.52■■□□□ 1.2
ITGA4-207ENST00000476089 ATP6V0A4Q9HBG4 840 aa22.52■■□□□ 1.2
ITGA4-207ENST00000476089 METTL14Q9HCE5 456 aaKnown RBP22.52■■□□□ 1.2
ITGA4-207ENST00000476089 GPRC5CQ9NQ84 441 aa22.52■■□□□ 1.2
ITGA4-207ENST00000476089 ARMCX3Q9UH62 379 aaPredicted RBP22.52■■□□□ 1.2
ITGA4-207ENST00000476089 PLXNB2O15031 1838 aa22.52■■□□□ 1.19
ITGA4-207ENST00000476089 ZMYM2Q9UBW7 1377 aa22.51■■□□□ 1.19
ITGA4-207ENST00000476089 NOP56O00567 594 aaKnown RBP22.51■■□□□ 1.19
ITGA4-207ENST00000476089 NKRFO15226 690 aaKnown RBP eCLIP22.51■■□□□ 1.19
ITGA4-207ENST00000476089 PPP2R3AQ06190 1150 aa22.51■■□□□ 1.19
ITGA4-207ENST00000476089 TTLL4Q14679 1199 aa22.51■■□□□ 1.19
ITGA4-207ENST00000476089 MTERF2Q49AM1 385 aa22.51■■□□□ 1.19
ITGA4-207ENST00000476089 CELF3Q5SZQ8 465 aaKnown RBP22.51■■□□□ 1.19
ITGA4-207ENST00000476089 ARMCX2Q7L311 632 aa22.51■■□□□ 1.19
ITGA4-207ENST00000476089 RASAL3Q86YV0 1011 aa22.51■■□□□ 1.19
ITGA4-207ENST00000476089 DHX37Q8IY37 1157 aaKnown RBP22.51■■□□□ 1.19
ITGA4-207ENST00000476089 ST6GALNAC4Q9H4F1 302 aa22.51■■□□□ 1.19
ITGA4-207ENST00000476089 NRBP2Q9NSY0 501 aa22.51■■□□□ 1.19
ITGA4-207ENST00000476089 ABHD10Q9NUJ1 306 aa22.51■■□□□ 1.19
ITGA4-207ENST00000476089 CAPN11Q9UMQ6 739 aa22.51■■□□□ 1.19
ITGA4-207ENST00000476089 ARIH2O95376 493 aa22.5■■□□□ 1.19
ITGA4-207ENST00000476089 TXNP10599 105 aaKnown RBP22.5■■□□□ 1.19
ITGA4-207ENST00000476089 MAPK4P31152 587 aa22.5■■□□□ 1.19
ITGA4-207ENST00000476089 TCF7P36402 384 aaPredicted RBP22.5■■□□□ 1.19
ITGA4-207ENST00000476089 STAT5BP51692 787 aa22.5■■□□□ 1.19
ITGA4-207ENST00000476089 HAUS6Q7Z4H7 955 aa22.5■■□□□ 1.19
ITGA4-207ENST00000476089 GPR142Q7Z601 462 aa22.5■■□□□ 1.19
ITGA4-207ENST00000476089 SCFD2Q8WU76 684 aa22.5■■□□□ 1.19
ITGA4-207ENST00000476089 TRMT1Q9NXH9 659 aaKnown RBP22.5■■□□□ 1.19
ITGA4-207ENST00000476089 TTC26A0AVF1 554 aa22.5■■□□□ 1.19
ITGA4-207ENST00000476089 CCDC169A6NNP5 214 aa22.5■■□□□ 1.19
ITGA4-207ENST00000476089 FIGNQ5HY92 759 aa22.5■■□□□ 1.19
ITGA4-207ENST00000476089 E4F1Q66K89 784 aaPredicted RBP22.5■■□□□ 1.19
ITGA4-207ENST00000476089 RGMBQ6NW40 437 aa22.5■■□□□ 1.19
ITGA4-207ENST00000476089 DPP9Q86TI2 863 aa22.5■■□□□ 1.19
ITGA4-207ENST00000476089 ZNF397Q8NF99 534 aaPredicted RBP22.5■■□□□ 1.19
ITGA4-207ENST00000476089 AFAP1L1Q8TED9 768 aa22.5■■□□□ 1.19
ITGA4-207ENST00000476089 KCNG1Q9UIX4 513 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms