RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 PIK3R5Q8WYR1 880 aa7.56□□□□□ -1.2
UBR4-212ENST00000475973 SEC14L1Q92503 715 aa7.56□□□□□ -1.2
UBR4-212ENST00000475973 GPKOWQ92917 476 aaPredicted RBP eCLIP7.56□□□□□ -1.2
UBR4-212ENST00000475973 CEP63Q96MT8 703 aa7.56□□□□□ -1.2
UBR4-212ENST00000475973 INPP4AQ96PE3 977 aaPredicted RBP7.56□□□□□ -1.2
UBR4-212ENST00000475973 LRRC1Q9BTT6 524 aa7.56□□□□□ -1.2
UBR4-212ENST00000475973 USP40Q9NVE5 1235 aa7.56□□□□□ -1.2
UBR4-212ENST00000475973 MAGEC2Q9UBF1 373 aaPredicted RBP7.56□□□□□ -1.2
UBR4-212ENST00000475973 FBXL5Q9UKA1 691 aa7.56□□□□□ -1.2
UBR4-212ENST00000475973 SNCAIPQ9Y6H5 919 aa7.56□□□□□ -1.2
UBR4-212ENST00000475973 MYH1P12882 1939 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 CYP3A7-CYP3A51PA0A087WV96 503 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 POM121CA8CG34 1229 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 ZNF185O15231 689 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 EIF3HO15372 352 aaKnown RBP eCLIP7.55□□□□□ -1.23e-19■■■■□ 24.5
UBR4-212ENST00000475973 USO1O60763 962 aaKnown RBP7.55□□□□□ -1.2
UBR4-212ENST00000475973 ENTPD3O75355 529 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 FGFR1OPO95684 399 aaKnown RBP7.55□□□□□ -1.2
UBR4-212ENST00000475973 LDHCP07864 332 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 FCER1AP12319 257 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 CYP3A7P24462 503 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 EIF4A3P38919 411 aaKnown RBP7.55□□□□□ -1.2
UBR4-212ENST00000475973 PRKCIP41743 596 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 BTDP43251 543 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 KIF11P52732 1056 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 EPHB4P54760 987 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 NAB2Q15742 525 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 MORN1Q5T089 497 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 MEI1Q5TIA1 1274 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 MIGA2Q7L4E1 593 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 OTOP1Q7RTM1 612 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 YTHDF3Q7Z739 585 aaKnown RBP7.55□□□□□ -1.2
UBR4-212ENST00000475973 SLFN11Q7Z7L1 901 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 EFCAB13Q8IY85 973 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 CD99L2Q8TCZ2 262 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 SCFD2Q8WU76 684 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 HDAC7Q8WUI4 952 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 LRRN4Q8WUT4 740 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 RAD54LQ92698 747 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 CCDC47Q96A33 483 aaKnown RBP7.55□□□□□ -1.2
UBR4-212ENST00000475973 CALR3Q96L12 384 aaKnown RBP7.55□□□□□ -1.2
UBR4-212ENST00000475973 CCDC42Q96M95 316 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 HS3ST6Q96QI5 342 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 NOC4LQ9BVI4 516 aaKnown RBP7.55□□□□□ -1.2
UBR4-212ENST00000475973 IDI2Q9BXS1 227 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 LRRC27Q9C0I9 530 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 FAM107BQ9H098 131 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 KCTD10Q9H3F6 313 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 R3HDMLQ9H3Y0 253 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 C6orf50Q9HD87 102 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 PICK1Q9NRD5 415 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 CEP72Q9P209 647 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 STIM2Q9P246 746 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 LRWD1Q9UFC0 647 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 SWAP70Q9UH65 585 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 TFR2Q9UP52 801 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 MAPK8IP1Q9UQF2 711 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 NAV1Q8NEY1 1877 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 CDK5RAP2Q96SN8 1893 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 FOCADQ5VW36 1801 aa7.55□□□□□ -1.2
UBR4-212ENST00000475973 KLRF2D3W0D1 207 aa7.54□□□□□ -1.2
UBR4-212ENST00000475973 H0YGN5 161 aa7.54□□□□□ -1.2
UBR4-212ENST00000475973 GPR37L1O60883 481 aa7.54□□□□□ -1.2
UBR4-212ENST00000475973 GNA14O95837 355 aa7.54□□□□□ -1.2
UBR4-212ENST00000475973 PLEKP08567 350 aaPredicted RBP7.54□□□□□ -1.2
UBR4-212ENST00000475973 IDEP14735 1019 aa7.54□□□□□ -1.2
UBR4-212ENST00000475973 TRIM21P19474 475 aaKnown RBP7.54□□□□□ -1.2
UBR4-212ENST00000475973 ECHS1P30084 290 aa7.54□□□□□ -1.2
UBR4-212ENST00000475973 HSPA9P38646 679 aaKnown RBP7.54□□□□□ -1.2
UBR4-212ENST00000475973 FNTAP49354 379 aa7.54□□□□□ -1.2
UBR4-212ENST00000475973 CYP27A1Q02318 531 aa7.54□□□□□ -1.2
UBR4-212ENST00000475973 NFIAQ12857 509 aa7.54□□□□□ -1.2
UBR4-212ENST00000475973 PICALMQ13492 652 aa7.54□□□□□ -1.2
UBR4-212ENST00000475973 TTMPQ5BVD1 217 aa7.54□□□□□ -1.2
UBR4-212ENST00000475973 DNAJC21Q5F1R6 531 aaKnown RBP7.54□□□□□ -1.2
UBR4-212ENST00000475973 NOL9Q5SY16 702 aaKnown RBP7.54□□□□□ -1.2
UBR4-212ENST00000475973 FKBP15Q5T1M5 1219 aa7.54□□□□□ -1.2
UBR4-212ENST00000475973 C10orf76Q5T2E6 689 aa7.54□□□□□ -1.2
UBR4-212ENST00000475973 ADGRD1Q6QNK2 874 aa7.54□□□□□ -1.2
UBR4-212ENST00000475973 MOXD1Q6UVY6 613 aa7.54□□□□□ -1.2
UBR4-212ENST00000475973 KDM7AQ6ZMT4 941 aa7.54□□□□□ -1.2
UBR4-212ENST00000475973 SV2BQ7L1I2 683 aa7.54□□□□□ -1.2
UBR4-212ENST00000475973 KIAA1328Q86T90 577 aa7.54□□□□□ -1.2
UBR4-212ENST00000475973 TEX2Q8IWB9 1127 aa7.54□□□□□ -1.2
UBR4-212ENST00000475973 KCTD17Q8N5Z5 321 aa7.54□□□□□ -1.2
UBR4-212ENST00000475973 TSEN2Q8NCE0 465 aaKnown RBP7.54□□□□□ -1.2
UBR4-212ENST00000475973 C3orf20Q8ND61 904 aa7.54□□□□□ -1.2
UBR4-212ENST00000475973 PRR7Q8TB68 274 aa7.54□□□□□ -1.2
UBR4-212ENST00000475973 SH3RF3Q8TEJ3 882 aaPredicted RBP7.54□□□□□ -1.2
UBR4-212ENST00000475973 LARP4BQ92615 738 aaKnown RBP7.54□□□□□ -1.2
UBR4-212ENST00000475973 GLMNQ92990 594 aa7.54□□□□□ -1.2
UBR4-212ENST00000475973 ZKSCAN4Q969J2 545 aaPredicted RBP7.54□□□□□ -1.2
UBR4-212ENST00000475973 PARK7Q99497 189 aaKnown RBP7.54□□□□□ -1.2
UBR4-212ENST00000475973 PTPN18Q99952 460 aa7.54□□□□□ -1.2
UBR4-212ENST00000475973 GANQ9H2C0 597 aa7.54□□□□□ -1.2
UBR4-212ENST00000475973 PLCB1Q9NQ66 1216 aa7.54□□□□□ -1.2
UBR4-212ENST00000475973 MCM9Q9NXL9 1143 aa7.54□□□□□ -1.2
UBR4-212ENST00000475973 TTC7AQ9ULT0 858 aaPredicted RBP7.54□□□□□ -1.2
UBR4-212ENST00000475973 NFS1Q9Y697 457 aa7.54□□□□□ -1.2
UBR4-212ENST00000475973 GOLGA6BA6NDN3 693 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms