RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 TMEM161AQ9NX61 479 aa12.29□□□□□ -0.44
CDRT1-205ENST00000475944 BARX2Q9UMQ3 279 aaPredicted RBP12.29□□□□□ -0.44
CDRT1-205ENST00000475944 CEP131Q9UPN4 1083 aa12.29□□□□□ -0.44
CDRT1-205ENST00000475944 USP15Q9Y4E8 981 aaPredicted RBP12.29□□□□□ -0.44
CDRT1-205ENST00000475944 MAFBQ9Y5Q3 323 aaPredicted RBP12.29□□□□□ -0.44
CDRT1-205ENST00000475944 FNDC1Q4ZHG4 1894 aaPredicted RBP12.28□□□□□ -0.44
CDRT1-205ENST00000475944 MAGEB2O15479 319 aa12.28□□□□□ -0.44
CDRT1-205ENST00000475944 HOXA2O43364 376 aa12.28□□□□□ -0.44
CDRT1-205ENST00000475944 VTNP04004 478 aa12.28□□□□□ -0.44
CDRT1-205ENST00000475944 PSAPP07602 524 aa12.28□□□□□ -0.44
CDRT1-205ENST00000475944 SRGAP2BP0DMP2 458 aa12.28□□□□□ -0.44
CDRT1-205ENST00000475944 LAG3P18627 525 aa12.28□□□□□ -0.44
CDRT1-205ENST00000475944 ATP4AP20648 1035 aa12.28□□□□□ -0.44
CDRT1-205ENST00000475944 GNA11P29992 359 aa12.28□□□□□ -0.44
CDRT1-205ENST00000475944 NHLH1Q02575 133 aa12.28□□□□□ -0.44
CDRT1-205ENST00000475944 FAM102BQ5T8I3 360 aa12.28□□□□□ -0.44
CDRT1-205ENST00000475944 RASEFQ8IZ41 740 aa12.28□□□□□ -0.44
CDRT1-205ENST00000475944 COLGALT1Q8NBJ5 622 aa12.28□□□□□ -0.44
CDRT1-205ENST00000475944 FAM167AQ96KS9 214 aa12.28□□□□□ -0.44
CDRT1-205ENST00000475944 MAP7D2Q96T17 732 aa12.28□□□□□ -0.44
CDRT1-205ENST00000475944 PPP1R16BQ96T49 567 aa12.28□□□□□ -0.44
CDRT1-205ENST00000475944 PHF7Q9BWX1 381 aaPredicted RBP12.28□□□□□ -0.44
CDRT1-205ENST00000475944 TYW1Q9NV66 732 aaKnown RBP12.28□□□□□ -0.44
CDRT1-205ENST00000475944 PCDHGC5Q9Y5F6 944 aa12.28□□□□□ -0.44
CDRT1-205ENST00000475944 PCDHA10Q9Y5I2 948 aa12.28□□□□□ -0.44
CDRT1-205ENST00000475944 LOC730098B7Z3J9 87 aa12.27□□□□□ -0.45
CDRT1-205ENST00000475944 PER2O15055 1255 aa12.27□□□□□ -0.45
CDRT1-205ENST00000475944 GPR32O75388 356 aa12.27□□□□□ -0.45
CDRT1-205ENST00000475944 FGFR1P11362 822 aa12.27□□□□□ -0.45
CDRT1-205ENST00000475944 TMOD1P28289 359 aa12.27□□□□□ -0.45
CDRT1-205ENST00000475944 ADD1P35611 737 aaKnown RBP12.27□□□□□ -0.45
CDRT1-205ENST00000475944 MRE11P49959 708 aa12.27□□□□□ -0.45
CDRT1-205ENST00000475944 DUSP6Q16828 381 aa12.27□□□□□ -0.45
CDRT1-205ENST00000475944 TRMT1LQ7Z2T5 733 aaKnown RBP12.27□□□□□ -0.45
CDRT1-205ENST00000475944 BMP8AQ7Z5Y6 402 aa12.27□□□□□ -0.45
CDRT1-205ENST00000475944 ZNF710Q8N1W2 664 aa12.27□□□□□ -0.45
CDRT1-205ENST00000475944 BICD2Q8TD16 824 aa12.27□□□□□ -0.45
CDRT1-205ENST00000475944 TMEM117Q9H0C3 514 aa12.27□□□□□ -0.45
CDRT1-205ENST00000475944 GABBR1Q9UBS5 961 aa12.27□□□□□ -0.45
CDRT1-205ENST00000475944 PUF60Q9UHX1 559 aaKnown RBP12.27□□□□□ -0.45
CDRT1-205ENST00000475944 AKT3Q9Y243 479 aa12.27□□□□□ -0.45
CDRT1-205ENST00000475944 LZTS1Q9Y250 596 aa12.27□□□□□ -0.45
CDRT1-205ENST00000475944 SAMM50Q9Y512 469 aa12.27□□□□□ -0.45
CDRT1-205ENST00000475944 MUC6Q6W4X9 2439 aa12.26□□□□□ -0.45
CDRT1-205ENST00000475944 WDR64B1ANS9 1081 aa12.26□□□□□ -0.45
CDRT1-205ENST00000475944 ZSCAN20P17040 1043 aaPredicted RBP12.26□□□□□ -0.45
CDRT1-205ENST00000475944 ATF7P17544 494 aaPredicted RBP12.26□□□□□ -0.45
CDRT1-205ENST00000475944 PPM1AP35813 382 aa12.26□□□□□ -0.45
CDRT1-205ENST00000475944 CLCN3P51790 818 aa12.26□□□□□ -0.45
CDRT1-205ENST00000475944 NLRP11P59045 1033 aaKnown RBP12.26□□□□□ -0.45
CDRT1-205ENST00000475944 ERVFC1P60507 584 aa12.26□□□□□ -0.45
CDRT1-205ENST00000475944 FAM189BP81408 668 aa12.26□□□□□ -0.45
CDRT1-205ENST00000475944 PLCB3Q01970 1234 aa12.26□□□□□ -0.45
CDRT1-205ENST00000475944 AKAP17AQ02040 695 aaKnown RBP12.26□□□□□ -0.45
CDRT1-205ENST00000475944 DSC3Q14574 896 aa12.26□□□□□ -0.45
CDRT1-205ENST00000475944 CBX2Q14781 532 aaPredicted RBP12.26□□□□□ -0.45
CDRT1-205ENST00000475944 PKN1Q16512 942 aa12.26□□□□□ -0.45
CDRT1-205ENST00000475944 PRR16Q569H4 304 aa12.26□□□□□ -0.45
CDRT1-205ENST00000475944 EFCAB12Q6NXP0 572 aa12.26□□□□□ -0.45
CDRT1-205ENST00000475944 TRIM67Q6ZTA4 783 aa12.26□□□□□ -0.45
CDRT1-205ENST00000475944 ABI1Q8IZP0 508 aa12.26□□□□□ -0.45
CDRT1-205ENST00000475944 MRPS27Q92552 414 aaKnown RBP12.26□□□□□ -0.45
CDRT1-205ENST00000475944 CWH43Q9H720 699 aa12.26□□□□□ -0.45
CDRT1-205ENST00000475944 ENTPD7Q9NQZ7 604 aa12.26□□□□□ -0.45
CDRT1-205ENST00000475944 HCSTQ9UBK5 93 aa12.26□□□□□ -0.45
CDRT1-205ENST00000475944 EVPLQ92817 2033 aa12.25□□□□□ -0.45
CDRT1-205ENST00000475944 TMEM221A6NGB7 291 aa12.25□□□□□ -0.45
CDRT1-205ENST00000475944 M0R296 226 aa12.25□□□□□ -0.45
CDRT1-205ENST00000475944 FSCN2O14926 492 aa12.25□□□□□ -0.45
CDRT1-205ENST00000475944 PRPF3O43395 683 aaKnown RBP12.25□□□□□ -0.45
CDRT1-205ENST00000475944 CDC45O75419 566 aa12.25□□□□□ -0.45
CDRT1-205ENST00000475944 EIF4BP23588 611 aaKnown RBP12.25□□□□□ -0.45
CDRT1-205ENST00000475944 CIITAP33076 1130 aa12.25□□□□□ -0.45
CDRT1-205ENST00000475944 ZXDAP98168 799 aa12.25□□□□□ -0.45
CDRT1-205ENST00000475944 KRT17Q04695 432 aa12.25□□□□□ -0.45
CDRT1-205ENST00000475944 APOBRQ0VD83 1088 aa12.25□□□□□ -0.45
CDRT1-205ENST00000475944 PLPP4Q5VZY2 271 aa12.25□□□□□ -0.45
CDRT1-205ENST00000475944 KCNT2Q6UVM3 1135 aa12.25□□□□□ -0.45
CDRT1-205ENST00000475944 TMEM184AQ6ZMB5 413 aa12.25□□□□□ -0.45
CDRT1-205ENST00000475944 CENPQQ7L2Z9 268 aaPredicted RBP12.25□□□□□ -0.45
CDRT1-205ENST00000475944 SUGP1Q8IWZ8 645 aaKnown RBP12.25□□□□□ -0.45
CDRT1-205ENST00000475944 LRRC43Q8N309 656 aa12.25□□□□□ -0.45
CDRT1-205ENST00000475944 CCDC148Q8NFR7 591 aa12.25□□□□□ -0.45
CDRT1-205ENST00000475944 VN1R2Q8NFZ6 395 aa12.25□□□□□ -0.45
CDRT1-205ENST00000475944 RASGRP4Q8TDF6 673 aa12.25□□□□□ -0.45
CDRT1-205ENST00000475944 SUSD6Q92537 303 aa12.25□□□□□ -0.45
CDRT1-205ENST00000475944 BRF1Q92994 677 aa12.25□□□□□ -0.45
CDRT1-205ENST00000475944 PBXIP1Q96AQ6 731 aa12.25□□□□□ -0.45
CDRT1-205ENST00000475944 RPGRIP1Q96KN7 1286 aa12.25□□□□□ -0.45
CDRT1-205ENST00000475944 ZNF558Q96NG5 402 aa12.25□□□□□ -0.45
CDRT1-205ENST00000475944 TCF25Q9BQ70 676 aa12.25□□□□□ -0.45
CDRT1-205ENST00000475944 NGRNQ9NPE2 291 aaKnown RBP12.25□□□□□ -0.45
CDRT1-205ENST00000475944 NRBP2Q9NSY0 501 aa12.25□□□□□ -0.45
CDRT1-205ENST00000475944 NID2Q14112 1375 aa12.25□□□□□ -0.45
CDRT1-205ENST00000475944 MYH9P35579 1960 aaKnown RBP12.25□□□□□ -0.45
CDRT1-205ENST00000475944 OATP04181 439 aa12.24□□□□□ -0.45
CDRT1-205ENST00000475944 RBM10P98175 930 aaKnown RBP12.24□□□□□ -0.45
CDRT1-205ENST00000475944 PRKCEQ02156 737 aa12.24□□□□□ -0.45
CDRT1-205ENST00000475944 BLOC1S2Q6QNY1 142 aa12.24□□□□□ -0.45
CDRT1-205ENST00000475944 Q6ZUG5 572 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms