RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 PRC1O43663 620 aa11.96□□□□□ -0.49
CALD1-217ENST00000475772 AP1G2O75843 785 aa11.96□□□□□ -0.49
CALD1-217ENST00000475772 CD2BP2O95400 341 aaKnown RBP11.96□□□□□ -0.49
CALD1-217ENST00000475772 INSRRP14616 1297 aa11.96□□□□□ -0.49
CALD1-217ENST00000475772 CD52P31358 61 aa11.96□□□□□ -0.49
CALD1-217ENST00000475772 ADAM15Q13444 863 aa11.96□□□□□ -0.49
CALD1-217ENST00000475772 SMAD2Q15796 467 aaKnown RBP11.96□□□□□ -0.49
CALD1-217ENST00000475772 ADHFE1Q8IWW8 467 aa11.96□□□□□ -0.49
CALD1-217ENST00000475772 CCDC82Q8N4S0 544 aa11.96□□□□□ -0.49
CALD1-217ENST00000475772 SPPL3Q8TCT6 385 aa11.96□□□□□ -0.49
CALD1-217ENST00000475772 LZTS2Q9BRK4 669 aa11.96□□□□□ -0.49
CALD1-217ENST00000475772 LSG1Q9H089 658 aaKnown RBP11.96□□□□□ -0.49
CALD1-217ENST00000475772 SMARCAD1Q9H4L7 1026 aa11.96□□□□□ -0.49
CALD1-217ENST00000475772 ERAP1Q9NZ08 941 aa11.96□□□□□ -0.49
CALD1-217ENST00000475772 PKD2L1Q9P0L9 805 aa11.96□□□□□ -0.49
CALD1-217ENST00000475772 MAP10Q9P2G4 905 aa11.96□□□□□ -0.49
CALD1-217ENST00000475772 PRKAG3Q9UGI9 489 aa11.96□□□□□ -0.49
CALD1-217ENST00000475772 TUBE1Q9UJT0 475 aa11.96□□□□□ -0.49
CALD1-217ENST00000475772 WDR81Q562E7 1941 aa11.96□□□□□ -0.5
CALD1-217ENST00000475772 MYO10Q9HD67 2058 aa11.95□□□□□ -0.5
CALD1-217ENST00000475772 MAFGO15525 162 aa11.95□□□□□ -0.5
CALD1-217ENST00000475772 TBX10O75333 385 aa11.95□□□□□ -0.5
CALD1-217ENST00000475772 MMP1P03956 469 aa11.95□□□□□ -0.5
CALD1-217ENST00000475772 ITGB1P05556 798 aa11.95□□□□□ -0.5
CALD1-217ENST00000475772 ARP10275 920 aa11.95□□□□□ -0.5
CALD1-217ENST00000475772 KIF5BP33176 963 aa11.95□□□□□ -0.5
CALD1-217ENST00000475772 LIFRP42702 1097 aa11.95□□□□□ -0.5
CALD1-217ENST00000475772 GNAQP50148 359 aa11.95□□□□□ -0.5
CALD1-217ENST00000475772 IGBP1P78318 339 aa11.95□□□□□ -0.5
CALD1-217ENST00000475772 MRPS6P82932 125 aaKnown RBP11.95□□□□□ -0.5
CALD1-217ENST00000475772 MTMR1Q13613 665 aa11.95□□□□□ -0.5
CALD1-217ENST00000475772 BTG3Q14201 252 aaPredicted RBP11.95□□□□□ -0.5
CALD1-217ENST00000475772 CLUL1Q15846 466 aa11.95□□□□□ -0.5
CALD1-217ENST00000475772 TMEM132AQ24JP5 1023 aa11.95□□□□□ -0.5
CALD1-217ENST00000475772 TMEM259Q4ZIN3 620 aa11.95□□□□□ -0.5
CALD1-217ENST00000475772 TSHZ1Q6ZSZ6 1077 aa11.95□□□□□ -0.5
CALD1-217ENST00000475772 ADGRD2Q7Z7M1 963 aa11.95□□□□□ -0.5
CALD1-217ENST00000475772 ALYREFQ86V81 257 aaKnown RBP11.95□□□□□ -0.5
CALD1-217ENST00000475772 TRAPPC12Q8WVT3 735 aa11.95□□□□□ -0.5
CALD1-217ENST00000475772 CDHR1Q96JP9 859 aa11.95□□□□□ -0.5
CALD1-217ENST00000475772 YTHDC1Q96MU7 727 aaKnown RBP11.95□□□□□ -0.5
CALD1-217ENST00000475772 C11orf84Q9BUA3 381 aaPredicted RBP11.95□□□□□ -0.5
CALD1-217ENST00000475772 LRRC2Q9BYS8 371 aa11.95□□□□□ -0.5
CALD1-217ENST00000475772 TMX1Q9H3N1 280 aa11.95□□□□□ -0.5
CALD1-217ENST00000475772 IGFLR1Q9H665 355 aa11.95□□□□□ -0.5
CALD1-217ENST00000475772 MRPL42Q9Y6G3 142 aaKnown RBP11.95□□□□□ -0.5
CALD1-217ENST00000475772 MYH9P35579 1960 aaKnown RBP11.94□□□□□ -0.5
CALD1-217ENST00000475772 SLC27A2O14975 620 aa11.94□□□□□ -0.5
CALD1-217ENST00000475772 NCK2O43639 380 aa11.94□□□□□ -0.5
CALD1-217ENST00000475772 CSPG5O95196 566 aa11.94□□□□□ -0.5
CALD1-217ENST00000475772 ATG7O95352 703 aa11.94□□□□□ -0.5
CALD1-217ENST00000475772 MCM5P33992 734 aa11.94□□□□□ -0.5
CALD1-217ENST00000475772 GATMP50440 423 aa11.94□□□□□ -0.5
CALD1-217ENST00000475772 TMEM62Q0P6H9 643 aa11.94□□□□□ -0.5
CALD1-217ENST00000475772 PLCB4Q15147 1175 aa11.94□□□□□ -0.5
CALD1-217ENST00000475772 NECTIN1Q15223 517 aa11.94□□□□□ -0.5
CALD1-217ENST00000475772 TMTC3Q6ZXV5 915 aa11.94□□□□□ -0.5
CALD1-217ENST00000475772 RSPH3Q86UC2 560 aa11.94□□□□□ -0.5
CALD1-217ENST00000475772 TMTC2Q8N394 836 aa11.94□□□□□ -0.5
CALD1-217ENST00000475772 FANCBQ8NB91 859 aa11.94□□□□□ -0.5
CALD1-217ENST00000475772 LRRN4Q8WUT4 740 aa11.94□□□□□ -0.5
CALD1-217ENST00000475772 GLG1Q92896 1179 aa11.94□□□□□ -0.5
CALD1-217ENST00000475772 P2RX5Q93086 422 aa11.94□□□□□ -0.5
CALD1-217ENST00000475772 TMEM87BQ96K49 555 aa11.94□□□□□ -0.5
CALD1-217ENST00000475772 MSLNLQ96KJ4 702 aa11.94□□□□□ -0.5
CALD1-217ENST00000475772 FBXL18Q96ME1 805 aa11.94□□□□□ -0.5
CALD1-217ENST00000475772 MXRA8Q9BRK3 442 aa11.94□□□□□ -0.5
CALD1-217ENST00000475772 PLVAPQ9BX97 442 aa11.94□□□□□ -0.5
CALD1-217ENST00000475772 FAM49AQ9H0Q0 323 aaPredicted RBP11.94□□□□□ -0.5
CALD1-217ENST00000475772 KCNH7Q9NS40 1196 aa11.94□□□□□ -0.5
CALD1-217ENST00000475772 CLEC1BQ9P126 229 aa11.94□□□□□ -0.5
CALD1-217ENST00000475772 SLC9A2Q9UBY0 812 aa11.94□□□□□ -0.5
CALD1-217ENST00000475772 SEC63Q9UGP8 760 aaKnown RBP11.94□□□□□ -0.5
CALD1-217ENST00000475772 PADI3Q9ULW8 664 aa11.94□□□□□ -0.5
CALD1-217ENST00000475772 RWDD3Q9Y3V2 267 aa11.94□□□□□ -0.5
CALD1-217ENST00000475772 PCDHA2Q9Y5H9 948 aa11.94□□□□□ -0.5
CALD1-217ENST00000475772 SQORQ9Y6N5 450 aa11.94□□□□□ -0.5
CALD1-217ENST00000475772 IGKV6D-21A0A0A0MT36 114 aa11.93□□□□□ -0.5
CALD1-217ENST00000475772 CCDC69A6NI79 296 aa11.93□□□□□ -0.5
CALD1-217ENST00000475772 RRN3P2A6NIE6 340 aa11.93□□□□□ -0.5
CALD1-217ENST00000475772 MGEA5O60502 916 aa11.93□□□□□ -0.5
CALD1-217ENST00000475772 EYA4O95677 639 aa11.93□□□□□ -0.5
CALD1-217ENST00000475772 CTHP32929 405 aa11.93□□□□□ -0.5
CALD1-217ENST00000475772 ITGB3BPQ13352 177 aaPredicted RBP11.93□□□□□ -0.5
CALD1-217ENST00000475772 WWC2Q6AWC2 1192 aa11.93□□□□□ -0.5
CALD1-217ENST00000475772 CASC1Q6TDU7 716 aa11.93□□□□□ -0.5
CALD1-217ENST00000475772 HFE2Q6ZVN8 426 aa11.93□□□□□ -0.5
CALD1-217ENST00000475772 PLPPR4Q7Z2D5 763 aa11.93□□□□□ -0.5
CALD1-217ENST00000475772 KLHL23Q8NBE8 558 aa11.93□□□□□ -0.5
CALD1-217ENST00000475772 PGBD1Q96JS3 809 aa11.93□□□□□ -0.5
CALD1-217ENST00000475772 UIMC1Q96RL1 719 aa11.93□□□□□ -0.5
CALD1-217ENST00000475772 CELF4Q9BZC1 486 aaKnown RBP11.93□□□□□ -0.5
CALD1-217ENST00000475772 MUTYHQ9UIF7 546 aa11.93□□□□□ -0.5
CALD1-217ENST00000475772 PCDHGC5Q9Y5F6 944 aa11.93□□□□□ -0.5
CALD1-217ENST00000475772 TRPV2Q9Y5S1 764 aa11.93□□□□□ -0.5
CALD1-217ENST00000475772 ZDBF2Q9HCK1 2354 aa11.92□□□□□ -0.5
CALD1-217ENST00000475772 NFASCO94856 1347 aa11.92□□□□□ -0.5
CALD1-217ENST00000475772 IGSF9BQ9UPX0 1349 aa11.92□□□□□ -0.5
CALD1-217ENST00000475772 KDM3AQ9Y4C1 1321 aa11.92□□□□□ -0.5
CALD1-217ENST00000475772 ATP4AP20648 1035 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms