RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 XRCC6P12956 609 aaKnown RBP eCLIP16.15■□□□□ 0.18
ABCF3-211ENST00000475728 SYT1P21579 422 aa16.15■□□□□ 0.18
ABCF3-211ENST00000475728 MUTP22033 750 aa16.15■□□□□ 0.18
ABCF3-211ENST00000475728 CLCN3P51790 818 aa16.15■□□□□ 0.18
ABCF3-211ENST00000475728 CRYBB1P53674 252 aaPredicted RBP16.15■□□□□ 0.18
ABCF3-211ENST00000475728 WDR5P61964 334 aaKnown RBP16.15■□□□□ 0.18
ABCF3-211ENST00000475728 TMEM62Q0P6H9 643 aa16.15■□□□□ 0.18
ABCF3-211ENST00000475728 NBR1Q14596 966 aa16.15■□□□□ 0.18
ABCF3-211ENST00000475728 ZNF697Q5TEC3 545 aa16.15■□□□□ 0.18
ABCF3-211ENST00000475728 DTHD1Q6ZMT9 781 aa16.15■□□□□ 0.18
ABCF3-211ENST00000475728 LINC01465Q8N7H1 131 aa16.15■□□□□ 0.18
ABCF3-211ENST00000475728 POLR3CQ9BUI4 534 aaPredicted RBP16.15■□□□□ 0.18
ABCF3-211ENST00000475728 FTHL17Q9BXU8 183 aa16.15■□□□□ 0.18
ABCF3-211ENST00000475728 PCDHA11Q9Y5I1 949 aa16.15■□□□□ 0.18
ABCF3-211ENST00000475728 VCANP13611 3396 aa16.14■□□□□ 0.17
ABCF3-211ENST00000475728 IGKV6-21A0A0C4DH24 114 aa16.14■□□□□ 0.17
ABCF3-211ENST00000475728 DNAJB2P25686 324 aa16.14■□□□□ 0.17
ABCF3-211ENST00000475728 POLGP54098 1239 aaPredicted RBP16.14■□□□□ 0.17
ABCF3-211ENST00000475728 ATP2C1P98194 919 aaPredicted RBP16.14■□□□□ 0.17
ABCF3-211ENST00000475728 PAK2Q13177 524 aa16.14■□□□□ 0.17
ABCF3-211ENST00000475728 XKR9Q5GH70 373 aa16.14■□□□□ 0.17
ABCF3-211ENST00000475728 ARL6IP4Q66PJ3 421 aaKnown RBP16.14■□□□□ 0.17
ABCF3-211ENST00000475728 HERC6Q8IVU3 1022 aa16.14■□□□□ 0.17
ABCF3-211ENST00000475728 LRRC71Q8N4P6 559 aa16.14■□□□□ 0.17
ABCF3-211ENST00000475728 SCLT1Q96NL6 688 aa16.14■□□□□ 0.17
ABCF3-211ENST00000475728 LRWD1Q9UFC0 647 aa16.14■□□□□ 0.17
ABCF3-211ENST00000475728 GINS2Q9Y248 185 aa16.14■□□□□ 0.17
ABCF3-211ENST00000475728 SPTBN5Q9NRC6 3674 aaKnown RBP16.14■□□□□ 0.17
ABCF3-211ENST00000475728 SCN5AQ14524 2016 aa16.14■□□□□ 0.17
ABCF3-211ENST00000475728 GPR182O15218 404 aa16.13■□□□□ 0.17
ABCF3-211ENST00000475728 VTNP04004 478 aa16.13■□□□□ 0.17
ABCF3-211ENST00000475728 RPA1P27694 616 aa16.13■□□□□ 0.17
ABCF3-211ENST00000475728 PLA2G4FQ68DD2 849 aa16.13■□□□□ 0.17
ABCF3-211ENST00000475728 TCP11Q8WWU5 503 aa16.13■□□□□ 0.17
ABCF3-211ENST00000475728 TIFAQ96CG3 184 aa16.13■□□□□ 0.17
ABCF3-211ENST00000475728 NACC1Q96RE7 527 aa16.13■□□□□ 0.17
ABCF3-211ENST00000475728 CEP89Q96ST8 783 aa16.13■□□□□ 0.17
ABCF3-211ENST00000475728 ZBED2Q9BTP6 218 aa16.13■□□□□ 0.17
ABCF3-211ENST00000475728 PBX4Q9BYU1 374 aa16.13■□□□□ 0.17
ABCF3-211ENST00000475728 ZSCAN16Q9H4T2 348 aaPredicted RBP16.13■□□□□ 0.17
ABCF3-211ENST00000475728 DHX33Q9H6R0 707 aaKnown RBP16.13■□□□□ 0.17
ABCF3-211ENST00000475728 PRDM6Q9NQX0 595 aa16.13■□□□□ 0.17
ABCF3-211ENST00000475728 FOXD4L1Q9NU39 408 aa16.13■□□□□ 0.17
ABCF3-211ENST00000475728 RNF216Q9NWF9 866 aaPredicted RBP16.13■□□□□ 0.17
ABCF3-211ENST00000475728 WRAP73Q9P2S5 460 aaPredicted RBP16.13■□□□□ 0.17
ABCF3-211ENST00000475728 TMEM150BA6NC51 233 aa16.12■□□□□ 0.17
ABCF3-211ENST00000475728 STX6O43752 255 aa16.12■□□□□ 0.17
ABCF3-211ENST00000475728 GPR32O75388 356 aa16.12■□□□□ 0.17
ABCF3-211ENST00000475728 RPS6KA5O75582 802 aa16.12■□□□□ 0.17
ABCF3-211ENST00000475728 CD52P31358 61 aa16.12■□□□□ 0.17
ABCF3-211ENST00000475728 NPEPPSP55786 919 aa16.12■□□□□ 0.17
ABCF3-211ENST00000475728 NLRP11P59045 1033 aaKnown RBP16.12■□□□□ 0.17
ABCF3-211ENST00000475728 KIZQ2M2Z5 673 aa16.12■□□□□ 0.17
ABCF3-211ENST00000475728 KRT79Q5XKE5 535 aa16.12■□□□□ 0.17
ABCF3-211ENST00000475728 FERMT3Q86UX7 667 aa16.12■□□□□ 0.17
ABCF3-211ENST00000475728 ZNF410Q86VK4 478 aa16.12■□□□□ 0.17
ABCF3-211ENST00000475728 CATSPER3Q86XQ3 398 aa16.12■□□□□ 0.17
ABCF3-211ENST00000475728 IGSF22Q8N9C0 903 aa16.12■□□□□ 0.17
ABCF3-211ENST00000475728 SUCLA2Q9P2R7 463 aaPredicted RBP16.12■□□□□ 0.17
ABCF3-211ENST00000475728 GRXCR1A8MXD5 290 aa16.11■□□□□ 0.17
ABCF3-211ENST00000475728 ASAP2O43150 1006 aa16.11■□□□□ 0.17
ABCF3-211ENST00000475728 DGAT1O75907 488 aa16.11■□□□□ 0.17
ABCF3-211ENST00000475728 SPATA31C1P0DKV0 1188 aa16.11■□□□□ 0.17
ABCF3-211ENST00000475728 CCT6AP40227 531 aaKnown RBP16.11■□□□□ 0.17
ABCF3-211ENST00000475728 GPC3P51654 580 aa16.11■□□□□ 0.17
ABCF3-211ENST00000475728 EMC2Q15006 297 aa16.11■□□□□ 0.17
ABCF3-211ENST00000475728 TCTN1Q2MV58 587 aa16.11■□□□□ 0.17
ABCF3-211ENST00000475728 MYOCDQ8IZQ8 938 aa16.11■□□□□ 0.17
ABCF3-211ENST00000475728 NLRP7Q8WX94 980 aa16.11■□□□□ 0.17
ABCF3-211ENST00000475728 PSPC1Q8WXF1 523 aaKnown RBP16.11■□□□□ 0.17
ABCF3-211ENST00000475728 FAM161BQ96MY7 647 aa16.11■□□□□ 0.17
ABCF3-211ENST00000475728 GUCD1Q96NT3 240 aa16.11■□□□□ 0.17
ABCF3-211ENST00000475728 OSMRQ99650 979 aa16.11■□□□□ 0.17
ABCF3-211ENST00000475728 SH2D3AQ9BRG2 576 aa16.11■□□□□ 0.17
ABCF3-211ENST00000475728 GCOM2Q9BZD3 368 aaPredicted RBP16.11■□□□□ 0.17
ABCF3-211ENST00000475728 INO80BQ9C086 356 aaPredicted RBP16.11■□□□□ 0.17
ABCF3-211ENST00000475728 ADAMTS10Q9H324 1103 aa16.11■□□□□ 0.17
ABCF3-211ENST00000475728 AGO3Q9H9G7 860 aaKnown RBP16.11■□□□□ 0.17
ABCF3-211ENST00000475728 SLC28A3Q9HAS3 691 aa16.11■□□□□ 0.17
ABCF3-211ENST00000475728 DBR1Q9UK59 544 aaKnown RBP16.11■□□□□ 0.17
ABCF3-211ENST00000475728 PADI3Q9ULW8 664 aa16.11■□□□□ 0.17
ABCF3-211ENST00000475728 MTMR6Q9Y217 621 aa16.11■□□□□ 0.17
ABCF3-211ENST00000475728 TET1Q8NFU7 2136 aa16.1■□□□□ 0.17
ABCF3-211ENST00000475728 TLL1O43897 1013 aa16.1■□□□□ 0.17
ABCF3-211ENST00000475728 MED24O75448 989 aa16.1■□□□□ 0.17
ABCF3-211ENST00000475728 GJB5O95377 273 aa16.1■□□□□ 0.17
ABCF3-211ENST00000475728 EIF4BP23588 611 aaKnown RBP16.1■□□□□ 0.17
ABCF3-211ENST00000475728 DEFB103AP81534 67 aa16.1■□□□□ 0.17
ABCF3-211ENST00000475728 NFX1Q12986 1120 aaKnown RBP16.1■□□□□ 0.17
ABCF3-211ENST00000475728 RESTQ13127 1097 aa16.1■□□□□ 0.17
ABCF3-211ENST00000475728 MKRN4PQ13434 485 aaPredicted RBP16.1■□□□□ 0.17
ABCF3-211ENST00000475728 KCTD17Q8N5Z5 321 aa16.1■□□□□ 0.17
ABCF3-211ENST00000475728 SNX29Q8TEQ0 813 aa16.1■□□□□ 0.17
ABCF3-211ENST00000475728 AK8Q96MA6 479 aa16.1■□□□□ 0.17
ABCF3-211ENST00000475728 RAD9AQ99638 391 aa16.1■□□□□ 0.17
ABCF3-211ENST00000475728 MTRQ99707 1265 aa16.1■□□□□ 0.17
ABCF3-211ENST00000475728 OSBPL7Q9BZF2 842 aa16.1■□□□□ 0.17
ABCF3-211ENST00000475728 ATP6V0A4Q9HBG4 840 aa16.1■□□□□ 0.17
ABCF3-211ENST00000475728 NOC2LQ9Y3T9 749 aaKnown RBP16.1■□□□□ 0.17
ABCF3-211ENST00000475728 SLC26A4O43511 780 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms