RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 ZNF689Q96CS4 500 aaPredicted RBP13.35□□□□□ -0.27
CLIP2-204ENST00000474962 SAMD11Q96NU1 681 aa13.35□□□□□ -0.27
CLIP2-204ENST00000474962 PPP1R16BQ96T49 567 aa13.35□□□□□ -0.27
CLIP2-204ENST00000474962 RC3H2Q9HBD1 1191 aaKnown RBP13.35□□□□□ -0.27
CLIP2-204ENST00000474962 GABBR1Q9UBS5 961 aa13.35□□□□□ -0.27
CLIP2-204ENST00000474962 NOC2LQ9Y3T9 749 aaKnown RBP13.35□□□□□ -0.27
CLIP2-204ENST00000474962 SAMM50Q9Y512 469 aa13.35□□□□□ -0.27
CLIP2-204ENST00000474962 TRIOO75962 3097 aa13.34□□□□□ -0.27
CLIP2-204ENST00000474962 TTC3P53804 2025 aa13.34□□□□□ -0.27
CLIP2-204ENST00000474962 VPS37CA5D8V6 355 aaPredicted RBP13.34□□□□□ -0.27
CLIP2-204ENST00000474962 BTBD18B2RXH4 712 aa13.34□□□□□ -0.27
CLIP2-204ENST00000474962 GRM6O15303 877 aa13.34□□□□□ -0.27
CLIP2-204ENST00000474962 PSAPP07602 524 aa13.34□□□□□ -0.27
CLIP2-204ENST00000474962 IBSPP21815 317 aaPredicted RBP13.34□□□□□ -0.27
CLIP2-204ENST00000474962 CTNNB1P35222 781 aa13.34□□□□□ -0.27
CLIP2-204ENST00000474962 SETQ01105 290 aaPredicted RBP13.34□□□□□ -0.27
CLIP2-204ENST00000474962 PAK2Q13177 524 aa13.34□□□□□ -0.27
CLIP2-204ENST00000474962 BTG3Q14201 252 aaPredicted RBP13.34□□□□□ -0.27
CLIP2-204ENST00000474962 PTPROQ16827 1216 aa13.34□□□□□ -0.27
CLIP2-204ENST00000474962 PIK3AP1Q6ZUJ8 805 aa13.34□□□□□ -0.27
CLIP2-204ENST00000474962 BANK1Q8NDB2 785 aa13.34□□□□□ -0.27
CLIP2-204ENST00000474962 TBCKQ8TEA7 893 aa13.34□□□□□ -0.27
CLIP2-204ENST00000474962 TMEM40Q8WWA1 233 aa13.34□□□□□ -0.27
CLIP2-204ENST00000474962 BBXQ8WY36 941 aaPredicted RBP13.34□□□□□ -0.27
CLIP2-204ENST00000474962 FTHL17Q9BXU8 183 aa13.34□□□□□ -0.27
CLIP2-204ENST00000474962 FOXP1Q9H334 677 aaPredicted RBP13.34□□□□□ -0.27
CLIP2-204ENST00000474962 UBE2ZQ9H832 354 aaPredicted RBP13.34□□□□□ -0.27
CLIP2-204ENST00000474962 KDM3AQ9Y4C1 1321 aa13.34□□□□□ -0.27
CLIP2-204ENST00000474962 ZNF862O60290 1169 aa13.33□□□□□ -0.28
CLIP2-204ENST00000474962 MGEA5O60502 916 aa13.33□□□□□ -0.28
CLIP2-204ENST00000474962 C22orf31O95567 290 aa13.33□□□□□ -0.28
CLIP2-204ENST00000474962 VTNP04004 478 aa13.33□□□□□ -0.28
CLIP2-204ENST00000474962 KCNA5P22460 613 aa13.33□□□□□ -0.28
CLIP2-204ENST00000474962 GATMP50440 423 aa13.33□□□□□ -0.28
CLIP2-204ENST00000474962 NR5A1Q13285 461 aa13.33□□□□□ -0.28
CLIP2-204ENST00000474962 INF2Q27J81 1249 aa13.33□□□□□ -0.28
CLIP2-204ENST00000474962 KIZQ2M2Z5 673 aa13.33□□□□□ -0.28
CLIP2-204ENST00000474962 TCEAL5Q5H9L2 206 aa13.33□□□□□ -0.28
CLIP2-204ENST00000474962 SMAP1Q8IYB5 467 aaPredicted RBP13.33□□□□□ -0.28
CLIP2-204ENST00000474962 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.33□□□□□ -0.28
CLIP2-204ENST00000474962 OXER1Q8TDS5 423 aa13.33□□□□□ -0.28
CLIP2-204ENST00000474962 CLP1Q92989 425 aaKnown RBP13.33□□□□□ -0.28
CLIP2-204ENST00000474962 NAP1L4Q99733 375 aaKnown RBP13.33□□□□□ -0.28
CLIP2-204ENST00000474962 ERVK-5Q9HDB9 667 aa13.33□□□□□ -0.28
CLIP2-204ENST00000474962 ALG13Q9NP73 1137 aaKnown RBP13.33□□□□□ -0.28
CLIP2-204ENST00000474962 DISC1Q9NRI5 854 aa13.33□□□□□ -0.28
CLIP2-204ENST00000474962 ST3GAL5Q9UNP4 418 aa13.33□□□□□ -0.28
CLIP2-204ENST00000474962 SIP14410 1827 aa13.33□□□□□ -0.28
CLIP2-204ENST00000474962 ADGRA3Q8IWK6 1321 aa13.33□□□□□ -0.28
CLIP2-204ENST00000474962 COL4A4P53420 1690 aaPredicted RBP13.32□□□□□ -0.28
CLIP2-204ENST00000474962 C5orf67F2Z3F1 127 aa13.32□□□□□ -0.28
CLIP2-204ENST00000474962 M0R2N6 131 aa13.32□□□□□ -0.28
CLIP2-204ENST00000474962 CHMP2AO43633 222 aa13.32□□□□□ -0.28
CLIP2-204ENST00000474962 MARCH6O60337 910 aa13.32□□□□□ -0.28
CLIP2-204ENST00000474962 GPR32O75388 356 aa13.32□□□□□ -0.28
CLIP2-204ENST00000474962 RPS6KA5O75582 802 aa13.32□□□□□ -0.28
CLIP2-204ENST00000474962 CSPG5O95196 566 aa13.32□□□□□ -0.28
CLIP2-204ENST00000474962 RB1P06400 928 aa13.32□□□□□ -0.28
CLIP2-204ENST00000474962 NPY5RQ15761 445 aa13.32□□□□□ -0.28
CLIP2-204ENST00000474962 UGCGQ16739 394 aa13.32□□□□□ -0.28
CLIP2-204ENST00000474962 PAN2Q504Q3 1202 aaKnown RBP13.32□□□□□ -0.28
CLIP2-204ENST00000474962 SLC5A5Q92911 643 aa13.32□□□□□ -0.28
CLIP2-204ENST00000474962 ADAM2Q99965 735 aa13.32□□□□□ -0.28
CLIP2-204ENST00000474962 UNC45AQ9H3U1 944 aa13.32□□□□□ -0.28
CLIP2-204ENST00000474962 CD320Q9NPF0 282 aa13.32□□□□□ -0.28
CLIP2-204ENST00000474962 TCEAL9Q9UHQ7 104 aa13.32□□□□□ -0.28
CLIP2-204ENST00000474962 NOL7Q9UMY1 257 aaKnown RBP13.32□□□□□ -0.28
CLIP2-204ENST00000474962 PLAGL2Q9UPG8 496 aa13.32□□□□□ -0.28
CLIP2-204ENST00000474962 MRPL42Q9Y6G3 142 aaKnown RBP13.32□□□□□ -0.28
CLIP2-204ENST00000474962 EVPLQ92817 2033 aa13.32□□□□□ -0.28
CLIP2-204ENST00000474962 COL1A2P08123 1366 aa13.32□□□□□ -0.28
CLIP2-204ENST00000474962 CYP3A7-CYP3A51PA0A087WV96 503 aa13.31□□□□□ -0.28
CLIP2-204ENST00000474962 WDR64B1ANS9 1081 aa13.31□□□□□ -0.28
CLIP2-204ENST00000474962 H3BQ06 376 aaPredicted RBP13.31□□□□□ -0.28
CLIP2-204ENST00000474962 STX6O43752 255 aa13.31□□□□□ -0.28
CLIP2-204ENST00000474962 GAS7O60861 476 aa13.31□□□□□ -0.28
CLIP2-204ENST00000474962 TDP2O95551 362 aa13.31□□□□□ -0.28
CLIP2-204ENST00000474962 ATP2B1P20020 1258 aa13.31□□□□□ -0.28
CLIP2-204ENST00000474962 SYT1P21579 422 aa13.31□□□□□ -0.28
CLIP2-204ENST00000474962 CYP3A7P24462 503 aa13.31□□□□□ -0.28
CLIP2-204ENST00000474962 CLCN3P51790 818 aa13.31□□□□□ -0.28
CLIP2-204ENST00000474962 CRYBB1P53674 252 aaPredicted RBP13.31□□□□□ -0.28
CLIP2-204ENST00000474962 CAMK1Q14012 370 aa13.31□□□□□ -0.28
CLIP2-204ENST00000474962 LETM2Q2VYF4 491 aa13.31□□□□□ -0.28
CLIP2-204ENST00000474962 LEXMQ3ZCV2 418 aa13.31□□□□□ -0.28
CLIP2-204ENST00000474962 Q4G0T1 1027 aa13.31□□□□□ -0.28
CLIP2-204ENST00000474962 FAM102BQ5T8I3 360 aa13.31□□□□□ -0.28
CLIP2-204ENST00000474962 LRCH2Q5VUJ6 765 aa13.31□□□□□ -0.28
CLIP2-204ENST00000474962 EFCAB12Q6NXP0 572 aa13.31□□□□□ -0.28
CLIP2-204ENST00000474962 EP400NLQ6ZTU2 488 aa13.31□□□□□ -0.28
CLIP2-204ENST00000474962 NEK8Q86SG6 692 aa13.31□□□□□ -0.28
CLIP2-204ENST00000474962 NPAS4Q8IUM7 802 aa13.31□□□□□ -0.28
CLIP2-204ENST00000474962 NOSTRINQ8IVI9 506 aa13.31□□□□□ -0.28
CLIP2-204ENST00000474962 LRRC71Q8N4P6 559 aa13.31□□□□□ -0.28
CLIP2-204ENST00000474962 ZNF668Q96K58 619 aaPredicted RBP13.31□□□□□ -0.28
CLIP2-204ENST00000474962 RIT2Q99578 217 aa13.31□□□□□ -0.28
CLIP2-204ENST00000474962 OSMRQ99650 979 aa13.31□□□□□ -0.28
CLIP2-204ENST00000474962 RGS18Q9NS28 235 aa13.31□□□□□ -0.28
CLIP2-204ENST00000474962 NRBP2Q9NSY0 501 aa13.31□□□□□ -0.28
CLIP2-204ENST00000474962 LRFN2Q9ULH4 789 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms