RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 TMCO5BA8MYB1 307 aa23.15■■□□□ 1.3
SH3D21-202ENST00000474766 PJA2O43164 708 aa23.15■■□□□ 1.3
SH3D21-202ENST00000474766 SLC1A4P43007 532 aa23.15■■□□□ 1.3
SH3D21-202ENST00000474766 NOGQ13253 232 aa23.15■■□□□ 1.3
SH3D21-202ENST00000474766 PTGISQ16647 500 aa23.15■■□□□ 1.3
SH3D21-202ENST00000474766 CERKLQ49MI3 558 aaPredicted RBP23.15■■□□□ 1.3
SH3D21-202ENST00000474766 SPRYD7Q5W111 196 aa23.15■■□□□ 1.3
SH3D21-202ENST00000474766 SIAH1Q8IUQ4 282 aa23.15■■□□□ 1.3
SH3D21-202ENST00000474766 ZNF473Q8WTR7 871 aaKnown RBP23.15■■□□□ 1.3
SH3D21-202ENST00000474766 PCMTD1Q96MG8 357 aaPredicted RBP23.15■■□□□ 1.3
SH3D21-202ENST00000474766 PCDHA1Q9Y5I3 950 aa23.15■■□□□ 1.3
SH3D21-202ENST00000474766 KDM3AQ9Y4C1 1321 aa23.15■■□□□ 1.3
SH3D21-202ENST00000474766 PHIPQ8WWQ0 1821 aa23.15■■□□□ 1.3
SH3D21-202ENST00000474766 HMGB1P1B2RPK0 211 aaPredicted RBP23.15■■□□□ 1.3
SH3D21-202ENST00000474766 USP17L15C9J2P7 530 aa23.15■■□□□ 1.3
SH3D21-202ENST00000474766 USP17L13C9JLJ4 530 aa23.15■■□□□ 1.3
SH3D21-202ENST00000474766 USP17L11C9JVI0 530 aa23.15■■□□□ 1.3
SH3D21-202ENST00000474766 USP17L18D6R9N7 530 aa23.15■■□□□ 1.3
SH3D21-202ENST00000474766 USP17L22D6RA61 530 aa23.15■■□□□ 1.3
SH3D21-202ENST00000474766 USP17L17D6RBQ6 530 aa23.15■■□□□ 1.3
SH3D21-202ENST00000474766 USP17L19D6RCP7 530 aa23.15■■□□□ 1.3
SH3D21-202ENST00000474766 USP17L20D6RJB6 530 aa23.15■■□□□ 1.3
SH3D21-202ENST00000474766 MYO1FO00160 1098 aa23.15■■□□□ 1.3
SH3D21-202ENST00000474766 RDXP35241 583 aaKnown RBP23.15■■□□□ 1.3
SH3D21-202ENST00000474766 USP17L24Q0WX57 530 aa23.15■■□□□ 1.3
SH3D21-202ENST00000474766 NEDD9Q14511 834 aa23.15■■□□□ 1.3
SH3D21-202ENST00000474766 NOL9Q5SY16 702 aaKnown RBP23.15■■□□□ 1.3
SH3D21-202ENST00000474766 SLFN13Q68D06 897 aa23.15■■□□□ 1.3
SH3D21-202ENST00000474766 TTC19Q6DKK2 380 aaPredicted RBP23.15■■□□□ 1.3
SH3D21-202ENST00000474766 USP17L6PQ6QN14 398 aa23.15■■□□□ 1.3
SH3D21-202ENST00000474766 CCDC84Q86UT8 332 aaPredicted RBP23.15■■□□□ 1.3
SH3D21-202ENST00000474766 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.15■■□□□ 1.32e-6■■■■□ 23.4
SH3D21-202ENST00000474766 GJA10Q969M2 543 aa23.15■■□□□ 1.3
SH3D21-202ENST00000474766 OPTNQ96CV9 577 aa23.15■■□□□ 1.3
SH3D21-202ENST00000474766 RNPC3Q96LT9 517 aaKnown RBP23.15■■□□□ 1.3
SH3D21-202ENST00000474766 RABEP2Q9H5N1 569 aa23.15■■□□□ 1.3
SH3D21-202ENST00000474766 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.15■■□□□ 1.3
SH3D21-202ENST00000474766 NR1D1P20393 614 aa23.14■■□□□ 1.29
SH3D21-202ENST00000474766 SLC7A5Q01650 507 aa23.14■■□□□ 1.29
SH3D21-202ENST00000474766 PREPLQ4J6C6 727 aaPredicted RBP23.14■■□□□ 1.29
SH3D21-202ENST00000474766 ZCWPW2Q504Y3 356 aa23.14■■□□□ 1.29
SH3D21-202ENST00000474766 MOXD1Q6UVY6 613 aa23.14■■□□□ 1.29
SH3D21-202ENST00000474766 CRYGNQ8WXF5 182 aa23.14■■□□□ 1.29
SH3D21-202ENST00000474766 ACTR5Q9H9F9 607 aaPredicted RBP23.14■■□□□ 1.29
SH3D21-202ENST00000474766 MARCH6O60337 910 aa23.13■■□□□ 1.29
SH3D21-202ENST00000474766 RASSF9O75901 435 aa23.13■■□□□ 1.29
SH3D21-202ENST00000474766 COASYQ13057 564 aa23.13■■□□□ 1.29
SH3D21-202ENST00000474766 CDC37Q16543 378 aaPredicted RBP23.13■■□□□ 1.29
SH3D21-202ENST00000474766 MYOCDQ8IZQ8 938 aa23.13■■□□□ 1.29
SH3D21-202ENST00000474766 RNF10Q8N5U6 811 aaKnown RBP23.13■■□□□ 1.29
SH3D21-202ENST00000474766 GLIS3Q8NEA6 775 aa23.13■■□□□ 1.29
SH3D21-202ENST00000474766 ANO3Q9BYT9 981 aa23.13■■□□□ 1.29
SH3D21-202ENST00000474766 SPDYE5A6NIY4 337 aa23.13■■□□□ 1.29
SH3D21-202ENST00000474766 GDF11O95390 407 aa23.13■■□□□ 1.29
SH3D21-202ENST00000474766 FAM107AO95990 144 aa23.13■■□□□ 1.29
SH3D21-202ENST00000474766 MDH1P40925 334 aaKnown RBP23.13■■□□□ 1.29
SH3D21-202ENST00000474766 CFAP221Q4G0U5 840 aa23.13■■□□□ 1.29
SH3D21-202ENST00000474766 SCYL3Q8IZE3 742 aa23.13■■□□□ 1.29
SH3D21-202ENST00000474766 WHAMMQ8TF30 809 aa23.13■■□□□ 1.29
SH3D21-202ENST00000474766 OTUD5Q96G74 571 aa23.13■■□□□ 1.29
SH3D21-202ENST00000474766 TSG101Q99816 390 aa23.13■■□□□ 1.29
SH3D21-202ENST00000474766 JPH2Q9BR39 696 aaPredicted RBP23.13■■□□□ 1.29
SH3D21-202ENST00000474766 KLC4Q9NSK0 619 aa23.13■■□□□ 1.29
SH3D21-202ENST00000474766 ZNF233A6NK53 670 aa23.12■■□□□ 1.29
SH3D21-202ENST00000474766 MEIS2O14770 477 aa23.12■■□□□ 1.29
SH3D21-202ENST00000474766 CTNND1O60716 968 aaKnown RBP23.12■■□□□ 1.29
SH3D21-202ENST00000474766 CAP2P40123 477 aa23.12■■□□□ 1.29
SH3D21-202ENST00000474766 AP3B2Q13367 1082 aa23.12■■□□□ 1.29
SH3D21-202ENST00000474766 C6orf89Q6UWU4 347 aa23.12■■□□□ 1.29
SH3D21-202ENST00000474766 NLRP14Q86W24 1093 aa23.12■■□□□ 1.29
SH3D21-202ENST00000474766 CCDC50Q8IVM0 306 aa23.12■■□□□ 1.29
SH3D21-202ENST00000474766 ARFGAP2Q8N6H7 521 aa23.12■■□□□ 1.29
SH3D21-202ENST00000474766 EIF1ADQ8N9N8 165 aaKnown RBP23.12■■□□□ 1.29
SH3D21-202ENST00000474766 MYCBPAPQ8TBZ2 947 aa23.12■■□□□ 1.29
SH3D21-202ENST00000474766 CCT8L2Q96SF2 557 aa23.12■■□□□ 1.29
SH3D21-202ENST00000474766 MOCS3O95396 460 aa23.11■■□□□ 1.29
SH3D21-202ENST00000474766 KIF11P52732 1056 aa23.11■■□□□ 1.29
SH3D21-202ENST00000474766 LRRC41Q15345 812 aa23.11■■□□□ 1.29
SH3D21-202ENST00000474766 CCDC40Q4G0X9 1142 aa23.11■■□□□ 1.29
SH3D21-202ENST00000474766 WLSQ5T9L3 541 aa23.11■■□□□ 1.29
SH3D21-202ENST00000474766 NFRKBQ6P4R8 1299 aa23.11■■□□□ 1.29
SH3D21-202ENST00000474766 TMEM179Q6ZVK1 233 aa23.11■■□□□ 1.29
SH3D21-202ENST00000474766 SH2D3CQ8N5H7 860 aa23.11■■□□□ 1.29
SH3D21-202ENST00000474766 GIMAP7Q8NHV1 300 aa23.11■■□□□ 1.29
SH3D21-202ENST00000474766 MAGEC3Q8TD91 643 aa23.11■■□□□ 1.29
SH3D21-202ENST00000474766 ATP6V1G3Q96LB4 118 aa23.11■■□□□ 1.29
SH3D21-202ENST00000474766 CCDC43Q96MW1 224 aaKnown RBP23.11■■□□□ 1.29
SH3D21-202ENST00000474766 BMP2KQ9NSY1 1161 aaPredicted RBP23.11■■□□□ 1.29
SH3D21-202ENST00000474766 PANK4Q9NVE7 773 aa23.11■■□□□ 1.29
SH3D21-202ENST00000474766 MCM8Q9UJA3 840 aa23.11■■□□□ 1.29
SH3D21-202ENST00000474766 PCDHA2Q9Y5H9 948 aa23.11■■□□□ 1.29
SH3D21-202ENST00000474766 EPHB6O15197 1021 aa23.11■■□□□ 1.29
SH3D21-202ENST00000474766 ZBTB48P10074 688 aaPredicted RBP23.11■■□□□ 1.29
SH3D21-202ENST00000474766 ATP1A2P50993 1020 aa23.11■■□□□ 1.29
SH3D21-202ENST00000474766 FAM26FQ5R3K3 315 aa23.11■■□□□ 1.29
SH3D21-202ENST00000474766 ERO1BQ86YB8 467 aa23.11■■□□□ 1.29
SH3D21-202ENST00000474766 GMCL1P1Q8NEA9 526 aa23.11■■□□□ 1.29
SH3D21-202ENST00000474766 MLXIPQ9HAP2 919 aa23.11■■□□□ 1.29
SH3D21-202ENST00000474766 GRID2IPA4D2P6 1211 aa23.1■■□□□ 1.29
SH3D21-202ENST00000474766 KRT14P02533 472 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms