RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 CYP4F22Q6NT55 531 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 DPP8Q6V1X1 898 aaPredicted RBP1.51□□□□□ -2.17
HDAC9-222ENST00000474742 ARHGAP36Q6ZRI8 547 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 KCTD1Q719H9 257 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 C16orf59Q7L2K0 433 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 ZNF627Q7L945 461 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 BHLHA9Q7RTU4 235 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 PNPLA5Q7Z6Z6 429 aaPredicted RBP1.51□□□□□ -2.17
HDAC9-222ENST00000474742 MTDHQ86UE4 582 aaKnown RBP1.51□□□□□ -2.17
HDAC9-222ENST00000474742 CISD2Q8N5K1 135 aaKnown RBP1.51□□□□□ -2.17
HDAC9-222ENST00000474742 DTX3Q8N9I9 347 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 ZSWIM2Q8NEG5 633 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 PHOSPHO1Q8TCT1 267 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 UBXN4Q92575 508 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 DLG3Q92796 817 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 FBXW5Q969U6 566 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 TMEM176AQ96HP8 235 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 AJUBAQ96IF1 538 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 TACO1Q9BSH4 297 aaKnown RBP1.51□□□□□ -2.17
HDAC9-222ENST00000474742 PLA2G12BQ9BX93 195 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 AMNQ9BXJ7 453 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 MRPL4Q9BYD3 311 aaKnown RBP1.51□□□□□ -2.17
HDAC9-222ENST00000474742 MTFR1LQ9H019 292 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 NRDE2Q9H7Z3 1164 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 SLC39A2Q9NP94 309 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 PLA2G3Q9NZ20 509 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 DSEQ9UL01 958 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 SRPK3Q9UPE1 567 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 PTPN22Q9Y2R2 807 aa1.51□□□□□ -2.17
HDAC9-222ENST00000474742 MRPL42Q9Y6G3 142 aaKnown RBP1.51□□□□□ -2.17
HDAC9-222ENST00000474742 ZNF839A8K0R7 811 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 AQP7O14520 342 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 PLD2O14939 933 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 CUTAO60888 179 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 IGSF3O75054 1194 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 GLRX3O76003 335 aaKnown RBP1.5□□□□□ -2.17
HDAC9-222ENST00000474742 ASMTLO95671 621 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 KNG1P01042 644 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 KRT15P19012 456 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 POLD1P28340 1107 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 CD38P28907 300 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 PTGS2P35354 604 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 MEOX1P50221 254 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 DNM2P50570 870 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 KCNQ1P51787 676 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 PFKPQ01813 784 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 SPIRE1Q08AE8 756 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 DBPQ10586 325 aaPredicted RBP1.5□□□□□ -2.17
HDAC9-222ENST00000474742 GPR19Q15760 415 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 RNF151Q2KHN1 245 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 WDR72Q3MJ13 1102 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 TMEM177Q53S58 311 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 CATSPEREQ5SY80 951 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 SOGA3Q5TF21 947 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 FNDC7Q5VTL7 733 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 BTBD8Q5XKL5 378 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 GIMAP6Q6P9H5 292 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 LRSAM1Q6UWE0 723 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 ZNF662Q6ZS27 426 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 EP400NLQ6ZTU2 488 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 OTOP1Q7RTM1 612 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 GLCCI1Q86VQ1 547 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 ZC3H7AQ8IWR0 971 aaKnown RBP1.5□□□□□ -2.17
HDAC9-222ENST00000474742 BCL6BQ8N143 479 aaPredicted RBP1.5□□□□□ -2.17
HDAC9-222ENST00000474742 SYNE4Q8N205 404 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 IGSF22Q8N9C0 903 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 FOXRED1Q96CU9 486 aaPredicted RBP1.5□□□□□ -2.17
HDAC9-222ENST00000474742 SCYL1Q96KG9 808 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 ALG1Q9BT22 464 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 CELF4Q9BZC1 486 aaKnown RBP1.5□□□□□ -2.17
HDAC9-222ENST00000474742 KCND1Q9NSA2 647 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 SFMBT1Q9UHJ3 866 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 FAM184BQ9ULE4 1060 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 TBX22Q9Y458 520 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 CD2APQ9Y5K6 639 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 TNPO3Q9Y5L0 923 aaKnown RBP1.5□□□□□ -2.17
HDAC9-222ENST00000474742 SLC30A1Q9Y6M5 507 aa1.5□□□□□ -2.17
HDAC9-222ENST00000474742 A0A087X0B3 334 aa1.49□□□□□ -2.17
HDAC9-222ENST00000474742 M0R2C6 588 aa1.49□□□□□ -2.17
HDAC9-222ENST00000474742 MATN2O00339 956 aa1.49□□□□□ -2.17
HDAC9-222ENST00000474742 SCDO00767 359 aa1.49□□□□□ -2.17
HDAC9-222ENST00000474742 FOXN1O15353 648 aa1.49□□□□□ -2.17
HDAC9-222ENST00000474742 ARHGAP6O43182 974 aa1.49□□□□□ -2.17
HDAC9-222ENST00000474742 EFCAB14O75071 495 aa1.49□□□□□ -2.17
HDAC9-222ENST00000474742 CLASP2O75122 1294 aaKnown RBP1.49□□□□□ -2.17
HDAC9-222ENST00000474742 RFPL3O75679 317 aa1.49□□□□□ -2.17
HDAC9-222ENST00000474742 GCP02774 474 aa1.49□□□□□ -2.17
HDAC9-222ENST00000474742 HMGCRP04035 888 aa1.49□□□□□ -2.17
HDAC9-222ENST00000474742 MMEP08473 750 aa1.49□□□□□ -2.17
HDAC9-222ENST00000474742 PTX3P26022 381 aaPredicted RBP1.49□□□□□ -2.17
HDAC9-222ENST00000474742 AOAHP28039 575 aa1.49□□□□□ -2.17
HDAC9-222ENST00000474742 IL13RA1P78552 427 aa1.49□□□□□ -2.17
HDAC9-222ENST00000474742 FOXL1Q12952 345 aa1.49□□□□□ -2.17
HDAC9-222ENST00000474742 PABPC4Q13310 644 aaKnown RBP eCLIP1.49□□□□□ -2.17
HDAC9-222ENST00000474742 PCBP1Q15365 356 aaKnown RBP eCLIP1.49□□□□□ -2.17
HDAC9-222ENST00000474742 SEPT7Q16181 437 aaKnown RBP1.49□□□□□ -2.17
HDAC9-222ENST00000474742 NFE2L2Q16236 605 aa1.49□□□□□ -2.17
HDAC9-222ENST00000474742 TBR1Q16650 682 aa1.49□□□□□ -2.17
HDAC9-222ENST00000474742 FNDC3BQ53EP0 1204 aaKnown RBP1.49□□□□□ -2.17
HDAC9-222ENST00000474742 DALRD3Q5D0E6 543 aaKnown RBP1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms