RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.53□□□□□ -1.84
CCDC39-203ENST00000473854 RECQL4O94761 1208 aa3.53□□□□□ -1.84
CCDC39-203ENST00000473854 CAPNS1P04632 268 aa3.53□□□□□ -1.84
CCDC39-203ENST00000473854 GJA8P48165 433 aa3.53□□□□□ -1.84
CCDC39-203ENST00000473854 CD83Q01151 205 aa3.53□□□□□ -1.84
CCDC39-203ENST00000473854 KLHDC10Q6PID8 442 aa3.53□□□□□ -1.84
CCDC39-203ENST00000473854 EEPD1Q7L9B9 569 aa3.53□□□□□ -1.84
CCDC39-203ENST00000473854 ZC3H7AQ8IWR0 971 aaKnown RBP3.53□□□□□ -1.84
CCDC39-203ENST00000473854 SMG7Q92540 1137 aaKnown RBP3.53□□□□□ -1.84
CCDC39-203ENST00000473854 GFM2Q969S9 779 aaKnown RBP3.53□□□□□ -1.84
CCDC39-203ENST00000473854 MNTQ99583 582 aa3.53□□□□□ -1.84
CCDC39-203ENST00000473854 IER2Q9BTL4 223 aa3.53□□□□□ -1.84
CCDC39-203ENST00000473854 BACH2Q9BYV9 841 aa3.53□□□□□ -1.84
CCDC39-203ENST00000473854 CTDP1Q9Y5B0 961 aaPredicted RBP3.53□□□□□ -1.84
CCDC39-203ENST00000473854 COL4A3Q01955 1670 aa3.52□□□□□ -1.85
CCDC39-203ENST00000473854 KLRG2A4D1S0 409 aaPredicted RBP3.52□□□□□ -1.85
CCDC39-203ENST00000473854 ADCY7P51828 1080 aa3.52□□□□□ -1.85
CCDC39-203ENST00000473854 RABGGTBP53611 331 aa3.52□□□□□ -1.85
CCDC39-203ENST00000473854 PPP2R2AP63151 447 aa3.52□□□□□ -1.85
CCDC39-203ENST00000473854 ST5P78524 1137 aa3.52□□□□□ -1.85
CCDC39-203ENST00000473854 GPR19Q15760 415 aa3.52□□□□□ -1.85
CCDC39-203ENST00000473854 GAGE13Q4V321 117 aa3.52□□□□□ -1.85
CCDC39-203ENST00000473854 NAIF1Q69YI7 327 aaPredicted RBP3.52□□□□□ -1.85
CCDC39-203ENST00000473854 GCDHQ92947 438 aaPredicted RBP3.52□□□□□ -1.85
CCDC39-203ENST00000473854 ANAPC16Q96DE5 110 aa3.52□□□□□ -1.85
CCDC39-203ENST00000473854 FAM193BQ96PV7 902 aaPredicted RBP3.52□□□□□ -1.85
CCDC39-203ENST00000473854 TCF25Q9BQ70 676 aa3.52□□□□□ -1.85
CCDC39-203ENST00000473854 ACTR10Q9NZ32 417 aa3.52□□□□□ -1.85
CCDC39-203ENST00000473854 PRAMEF25A6NGN4 478 aa3.51□□□□□ -1.85
CCDC39-203ENST00000473854 FAM90A27PA6NNH2 459 aa3.51□□□□□ -1.85
CCDC39-203ENST00000473854 GOLGA8BA8MQT2 603 aa3.51□□□□□ -1.85
CCDC39-203ENST00000473854 TRIM24O15164 1050 aa3.51□□□□□ -1.85
CCDC39-203ENST00000473854 DLX3O60479 287 aa3.51□□□□□ -1.85
CCDC39-203ENST00000473854 DDAH1O94760 285 aa3.51□□□□□ -1.85
CCDC39-203ENST00000473854 GYPEP15421 78 aa3.51□□□□□ -1.85
CCDC39-203ENST00000473854 LAG3P18627 525 aa3.51□□□□□ -1.85
CCDC39-203ENST00000473854 STAT5BP51692 787 aa3.51□□□□□ -1.85
CCDC39-203ENST00000473854 SAFB2Q14151 953 aaKnown RBP eCLIP3.51□□□□□ -1.85
CCDC39-203ENST00000473854 HSP90AA2PQ14568 343 aaPredicted RBP3.51□□□□□ -1.85
CCDC39-203ENST00000473854 FXNQ16595 210 aa3.51□□□□□ -1.85
CCDC39-203ENST00000473854 DCAF17Q5H9S7 520 aaPredicted RBP3.51□□□□□ -1.85
CCDC39-203ENST00000473854 FKBP15Q5T1M5 1219 aa3.51□□□□□ -1.85
CCDC39-203ENST00000473854 NBPF6Q5VWK0 638 aa3.51□□□□□ -1.85
CCDC39-203ENST00000473854 LARP1BQ659C4 914 aaKnown RBP3.51□□□□□ -1.85
CCDC39-203ENST00000473854 STYK1Q6J9G0 422 aa3.51□□□□□ -1.85
CCDC39-203ENST00000473854 FBXO42Q6P3S6 717 aa3.51□□□□□ -1.85
CCDC39-203ENST00000473854 BEND2Q8NDZ0 799 aa3.51□□□□□ -1.85
CCDC39-203ENST00000473854 CALML6Q8TD86 181 aa3.51□□□□□ -1.85
CCDC39-203ENST00000473854 SH3RF2Q8TEC5 729 aa3.51□□□□□ -1.85
CCDC39-203ENST00000473854 ATXN2LQ8WWM7 1075 aaKnown RBP3.51□□□□□ -1.85
CCDC39-203ENST00000473854 NBPF4Q96M43 638 aa3.51□□□□□ -1.85
CCDC39-203ENST00000473854 KRTAP1-5Q9BYS1 174 aa3.51□□□□□ -1.85
CCDC39-203ENST00000473854 R3HDMLQ9H3Y0 253 aa3.51□□□□□ -1.85
CCDC39-203ENST00000473854 BTBD7Q9P203 1132 aa3.51□□□□□ -1.85
CCDC39-203ENST00000473854 HOXB6P17509 224 aaKnown RBP3.5□□□□□ -1.85
CCDC39-203ENST00000473854 CLK3P49761 638 aaKnown RBP3.5□□□□□ -1.85
CCDC39-203ENST00000473854 ATP2C1P98194 919 aaPredicted RBP3.5□□□□□ -1.85
CCDC39-203ENST00000473854 Q6YL49 198 aa3.5□□□□□ -1.85
CCDC39-203ENST00000473854 ARHGAP36Q6ZRI8 547 aa3.5□□□□□ -1.85
CCDC39-203ENST00000473854 SPATA5L1Q9BVQ7 753 aa3.5□□□□□ -1.85
CCDC39-203ENST00000473854 IPPKQ9H8X2 491 aa3.5□□□□□ -1.85
CCDC39-203ENST00000473854 RSAD1Q9HA92 442 aa3.5□□□□□ -1.85
CCDC39-203ENST00000473854 SCAMP3O14828 347 aaKnown RBP3.49□□□□□ -1.85
CCDC39-203ENST00000473854 GSTA4O15217 222 aa3.49□□□□□ -1.85
CCDC39-203ENST00000473854 APEX1P27695 318 aaKnown RBP3.49□□□□□ -1.85
CCDC39-203ENST00000473854 MC4RP32245 332 aa3.49□□□□□ -1.85
CCDC39-203ENST00000473854 BPIFB4P59827 614 aa3.49□□□□□ -1.85
CCDC39-203ENST00000473854 PAK1Q13153 545 aa3.49□□□□□ -1.85
CCDC39-203ENST00000473854 ADAM15Q13444 863 aa3.49□□□□□ -1.85
CCDC39-203ENST00000473854 MAMDC2Q7Z304 686 aaPredicted RBP3.49□□□□□ -1.85
CCDC39-203ENST00000473854 LCORLQ8N3X6 602 aa3.49□□□□□ -1.85
CCDC39-203ENST00000473854 MDGA1Q8NFP4 955 aa3.49□□□□□ -1.85
CCDC39-203ENST00000473854 SCARB1Q8WTV0 552 aa3.49□□□□□ -1.85
CCDC39-203ENST00000473854 ARL8AQ96BM9 186 aa3.49□□□□□ -1.85
CCDC39-203ENST00000473854 SGSM3Q96HU1 749 aa3.49□□□□□ -1.85
CCDC39-203ENST00000473854 COQ10AQ96MF6 247 aa3.49□□□□□ -1.85
CCDC39-203ENST00000473854 AMNQ9BXJ7 453 aa3.49□□□□□ -1.85
CCDC39-203ENST00000473854 IL23AQ9NPF7 189 aa3.49□□□□□ -1.85
CCDC39-203ENST00000473854 RCAN3Q9UKA8 241 aa3.49□□□□□ -1.85
CCDC39-203ENST00000473854 IQCA1LA6NCM1 817 aa3.48□□□□□ -1.85
CCDC39-203ENST00000473854 MYADML2A6NDP7 307 aa3.48□□□□□ -1.85
CCDC39-203ENST00000473854 GRXCR1A8MXD5 290 aa3.48□□□□□ -1.85
CCDC39-203ENST00000473854 WNT9AO14904 365 aa3.48□□□□□ -1.85
CCDC39-203ENST00000473854 CLASP2O75122 1294 aaKnown RBP3.48□□□□□ -1.85
CCDC39-203ENST00000473854 MPIG6BO95866 241 aa3.48□□□□□ -1.85
CCDC39-203ENST00000473854 C4BPAP04003 597 aaKnown RBP3.48□□□□□ -1.85
CCDC39-203ENST00000473854 NAT1P18440 290 aa3.48□□□□□ -1.85
CCDC39-203ENST00000473854 GNAT2P19087 354 aa3.48□□□□□ -1.85
CCDC39-203ENST00000473854 NR4A1P22736 598 aa3.48□□□□□ -1.85
CCDC39-203ENST00000473854 GRIA2P42262 883 aa3.48□□□□□ -1.85
CCDC39-203ENST00000473854 BLOC1S1P78537 153 aa3.48□□□□□ -1.85
CCDC39-203ENST00000473854 SLC10A6Q3KNW5 377 aa3.48□□□□□ -1.85
CCDC39-203ENST00000473854 PRR16Q569H4 304 aa3.48□□□□□ -1.85
CCDC39-203ENST00000473854 LCE1AQ5T7P2 110 aa3.48□□□□□ -1.85
CCDC39-203ENST00000473854 IQSEC1Q6DN90 963 aa3.48□□□□□ -1.85
CCDC39-203ENST00000473854 KCNT2Q6UVM3 1135 aa3.48□□□□□ -1.85
CCDC39-203ENST00000473854 ANKRD53Q8N9V6 530 aa3.48□□□□□ -1.85
CCDC39-203ENST00000473854 CPT1CQ8TCG5 803 aa3.48□□□□□ -1.85
CCDC39-203ENST00000473854 SLC9A6Q92581 669 aa3.48□□□□□ -1.85
CCDC39-203ENST00000473854 PGBD4Q96DM1 585 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms