RNA–Protein interactions for RNA: ENST00000473820.1

PPP2R1A-208, Transcript of protein phosphatase 2 scaffold subunit Aalpha, human

TSL 2

Gene PPP2R1A, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP2R1A-208	ENST00000473820	SDF4	Q9BRK5	362 aa		11.22	□□□□□ -0.61
PPP2R1A-208	ENST00000473820	LMAN2L	Q9H0V9	348 aa		11.22	□□□□□ -0.61
PPP2R1A-208	ENST00000473820	TUT1	Q9H6E5	874 aa	Known RBP	11.22	□□□□□ -0.61
PPP2R1A-208	ENST00000473820	AGO4	Q9HCK5	861 aa	Known RBP	11.22	□□□□□ -0.61
PPP2R1A-208	ENST00000473820	RWDD3	Q9Y3V2	267 aa		11.22	□□□□□ -0.61
PPP2R1A-208	ENST00000473820	CCDC194	A0A1B0GVG4	234 aa		11.21	□□□□□ -0.61
PPP2R1A-208	ENST00000473820	SYCE3	A1L190	88 aa		11.21	□□□□□ -0.61
PPP2R1A-208	ENST00000473820	DDX39A	O00148	427 aa	Known RBP	11.21	□□□□□ -0.61
PPP2R1A-208	ENST00000473820	GRM6	O15303	877 aa		11.21	□□□□□ -0.61
PPP2R1A-208	ENST00000473820	SMIM10L2A	P0DMW4	78 aa		11.21	□□□□□ -0.61
PPP2R1A-208	ENST00000473820	SMIM10L2B	P0DMW5	78 aa		11.21	□□□□□ -0.61
PPP2R1A-208	ENST00000473820	BMPR1A	P36894	532 aa		11.21	□□□□□ -0.61
PPP2R1A-208	ENST00000473820	NDUFV1	P49821	464 aa		11.21	□□□□□ -0.61
PPP2R1A-208	ENST00000473820	USP11	P51784	963 aa		11.21	□□□□□ -0.61
PPP2R1A-208	ENST00000473820	GUCY1B3	Q02153	619 aa		11.21	□□□□□ -0.61
PPP2R1A-208	ENST00000473820	DLX2	Q07687	328 aa	Predicted RBP	11.21	□□□□□ -0.61
PPP2R1A-208	ENST00000473820	SMAD4	Q13485	552 aa	Known RBP	11.21	□□□□□ -0.61
PPP2R1A-208	ENST00000473820	HIC1	Q14526	733 aa		11.21	□□□□□ -0.61
PPP2R1A-208	ENST00000473820	NONO	Q15233	471 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
PPP2R1A-208	ENST00000473820	KRT25	Q7Z3Z0	450 aa		11.21	□□□□□ -0.61
PPP2R1A-208	ENST00000473820	DAGLB	Q8NCG7	672 aa		11.21	□□□□□ -0.61
PPP2R1A-208	ENST00000473820	SEPT1	Q8WYJ6	367 aa		11.21	□□□□□ -0.61
PPP2R1A-208	ENST00000473820	PHOX2B	Q99453	314 aa		11.21	□□□□□ -0.61
PPP2R1A-208	ENST00000473820	ZNF577	Q9BSK1	485 aa		11.21	□□□□□ -0.61
PPP2R1A-208	ENST00000473820	RNPEP	Q9H4A4	650 aa		11.21	□□□□□ -0.61
PPP2R1A-208	ENST00000473820	BRMS1	Q9HCU9	246 aa		11.21	□□□□□ -0.61
PPP2R1A-208	ENST00000473820	JPH1	Q9HDC5	661 aa	Predicted RBP	11.21	□□□□□ -0.61
PPP2R1A-208	ENST00000473820	CD207	Q9UJ71	328 aa		11.21	□□□□□ -0.61
PPP2R1A-208	ENST00000473820	IGLV3-22	A0A075B6J6	115 aa		11.2	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	11.2	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	TMEM221	A6NGB7	291 aa		11.2	□□□□□ -0.62
PPP2R1A-208	ENST00000473820		M0R296	226 aa		11.2	□□□□□ -0.62
PPP2R1A-208	ENST00000473820		M0R2N6	131 aa		11.2	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	IPO5	O00410	1097 aa	Known RBP	11.2	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	LGALS2	P05162	132 aa		11.2	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	KRT2	P35908	639 aa		11.2	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	TCF7	P36402	384 aa	Predicted RBP	11.2	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	HYAL1	Q12794	435 aa		11.2	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	NR5A1	Q13285	461 aa		11.2	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	ITGB3BP	Q13352	177 aa	Predicted RBP	11.2	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	BTG3	Q14201	252 aa	Predicted RBP	11.2	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	COL19A1	Q14993	1142 aa		11.2	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	INF2	Q27J81	1249 aa		11.2	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	LETM2	Q2VYF4	491 aa		11.2	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	IER5L	Q5T953	404 aa		11.2	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	TRIM67	Q6ZTA4	783 aa		11.2	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	PIK3AP1	Q6ZUJ8	805 aa		11.2	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	NIPA1	Q7RTP0	329 aa		11.2	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	TRIM50	Q86XT4	487 aa		11.2	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	LEO1	Q8WVC0	666 aa	Predicted RBP	11.2	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	GLG1	Q92896	1179 aa		11.2	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	C16orf70	Q9BSU1	422 aa		11.2	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	SLC9A2	Q9UBY0	812 aa		11.2	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	RCOR1	Q9UKL0	485 aa		11.2	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	C5orf42	Q9H799	3197 aa		11.2	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	KIAA1217	Q5T5P2	1943 aa		11.19	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	GSTTP1	A0A1W2PQM5	241 aa		11.19	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	BTBD18	B2RXH4	712 aa		11.19	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	EDIL3	O43854	480 aa		11.19	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	CAND2	O75155	1236 aa		11.19	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	GADD45B	O75293	160 aa	Predicted RBP	11.19	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	MMP1	P03956	469 aa		11.19	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	HOXD8	P13378	290 aa	Predicted RBP	11.19	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	CIITA	P33076	1130 aa		11.19	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	GTF2F1	P35269	517 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	ACTR2	P61160	394 aa		11.19	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	SET	Q01105	290 aa	Predicted RBP	11.19	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	MKRN4P	Q13434	485 aa	Predicted RBP	11.19	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	SAFB	Q15424	915 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	CTC1	Q2NKJ3	1217 aa		11.19	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	BMP8A	Q7Z5Y6	402 aa		11.19	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	DIS3L2	Q8IYB7	885 aa	Known RBP	11.19	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	PRSS33	Q8NF86	280 aa		11.19	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	FBXO18	Q8NFZ0	1043 aa		11.19	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	C8orf76	Q96K31	380 aa		11.19	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	GDPD2	Q9HCC8	539 aa		11.19	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	ALG13	Q9NP73	1137 aa	Known RBP	11.19	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	TBC1D22B	Q9NU19	505 aa		11.19	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	SETD4	Q9NVD3	440 aa		11.19	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	ZNF215	Q9UL58	517 aa	Predicted RBP	11.19	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	ZNF318	Q5VUA4	2279 aa		11.19	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	TRIO	O75962	3097 aa		11.18	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	NFASC	O94856	1347 aa		11.18	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	C5orf67	F2Z3F1	127 aa		11.18	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	LINC01565	O15544	149 aa		11.18	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	DHX15	O43143	795 aa	Known RBP	11.18	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	CCNT1	O60563	726 aa	Known RBP	11.18	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	GFRA3	O60609	400 aa		11.18	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	TDP2	O95551	362 aa		11.18	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	CCDC192	P0DO97	292 aa		11.18	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	MARK3	P27448	753 aa		11.18	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	EARS2	Q5JPH6	523 aa	Known RBP	11.18	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	FERMT3	Q86UX7	667 aa		11.18	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	KCNG4	Q8TDN1	519 aa		11.18	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	ATOH1	Q92858	354 aa	Predicted RBP	11.18	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	GJA10	Q969M2	543 aa		11.18	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	PDLIM2	Q96JY6	352 aa		11.18	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	IRF2BPL	Q9H1B7	796 aa		11.18	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	RBSN	Q9H1K0	784 aa		11.18	□□□□□ -0.62
PPP2R1A-208	ENST00000473820	NUP62CL	Q9H1M0	184 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms