RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 ZNF827Q17R98 1081 aa6.35□□□□□ -1.39
CNOT4-209ENST00000473470 DALRD3Q5D0E6 543 aaKnown RBP6.35□□□□□ -1.39
CNOT4-209ENST00000473470 EGFLAMQ63HQ2 1017 aa6.35□□□□□ -1.39
CNOT4-209ENST00000473470 SLFN13Q68D06 897 aa6.35□□□□□ -1.39
CNOT4-209ENST00000473470 GLB1LQ6UWU2 654 aa6.35□□□□□ -1.39
CNOT4-209ENST00000473470 RTN4RL1Q86UN2 441 aaPredicted RBP6.35□□□□□ -1.39
CNOT4-209ENST00000473470 C7orf31Q8N865 590 aa6.35□□□□□ -1.39
CNOT4-209ENST00000473470 OR2W6PQ8NHA6 318 aa6.35□□□□□ -1.39
CNOT4-209ENST00000473470 BORCS6Q96GS4 357 aa6.35□□□□□ -1.39
CNOT4-209ENST00000473470 AMNQ9BXJ7 453 aa6.35□□□□□ -1.39
CNOT4-209ENST00000473470 ZDHHC5Q9C0B5 715 aa6.35□□□□□ -1.39
CNOT4-209ENST00000473470 TMX1Q9H3N1 280 aa6.35□□□□□ -1.39
CNOT4-209ENST00000473470 SEC61A2Q9H9S3 476 aa6.35□□□□□ -1.39
CNOT4-209ENST00000473470 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.35□□□□□ -1.39
CNOT4-209ENST00000473470 SPO11Q9Y5K1 396 aa6.35□□□□□ -1.39
CNOT4-209ENST00000473470 MROH2BQ7Z745 1585 aa6.35□□□□□ -1.39
CNOT4-209ENST00000473470 RAD54L2Q9Y4B4 1467 aa6.34□□□□□ -1.39
CNOT4-209ENST00000473470 A0A0G2JNJ9 132 aa6.34□□□□□ -1.39
CNOT4-209ENST00000473470 GOLGA6L22H0YM25 854 aa6.34□□□□□ -1.39
CNOT4-209ENST00000473470 F2P00734 622 aa6.34□□□□□ -1.39
CNOT4-209ENST00000473470 ITGB3P05106 788 aa6.34□□□□□ -1.39
CNOT4-209ENST00000473470 DSG1Q02413 1049 aa6.34□□□□□ -1.39
CNOT4-209ENST00000473470 SPATS1Q496A3 300 aa6.34□□□□□ -1.39
CNOT4-209ENST00000473470 TBC1D10BQ4KMP7 808 aaPredicted RBP6.34□□□□□ -1.39
CNOT4-209ENST00000473470 TTC38Q5R3I4 469 aa6.34□□□□□ -1.39
CNOT4-209ENST00000473470 LCE1DQ5T752 114 aa6.34□□□□□ -1.39
CNOT4-209ENST00000473470 CNNM4Q6P4Q7 775 aa6.34□□□□□ -1.39
CNOT4-209ENST00000473470 ERCC4Q92889 916 aaPredicted RBP6.34□□□□□ -1.39
CNOT4-209ENST00000473470 TARS2Q9BW92 718 aaKnown RBP6.34□□□□□ -1.39
CNOT4-209ENST00000473470 USP36Q9P275 1121 aaKnown RBP6.34□□□□□ -1.39
CNOT4-209ENST00000473470 Q9UFV3 132 aa6.34□□□□□ -1.39
CNOT4-209ENST00000473470 ZDHHC9Q9Y397 364 aa6.34□□□□□ -1.39
CNOT4-209ENST00000473470 TOPBP1Q92547 1522 aa6.34□□□□□ -1.39
CNOT4-209ENST00000473470 PRRG2O14669 202 aa6.33□□□□□ -1.4
CNOT4-209ENST00000473470 ADCY8P40145 1251 aa6.33□□□□□ -1.4
CNOT4-209ENST00000473470 MEOX1P50221 254 aa6.33□□□□□ -1.4
CNOT4-209ENST00000473470 SESN2P58004 480 aaPredicted RBP6.33□□□□□ -1.4
CNOT4-209ENST00000473470 PPP2CBP62714 309 aa6.33□□□□□ -1.4
CNOT4-209ENST00000473470 PPP2CAP67775 309 aa6.33□□□□□ -1.4
CNOT4-209ENST00000473470 EIF4HQ15056 248 aaKnown RBP6.33□□□□□ -1.4
CNOT4-209ENST00000473470 SLFN12LQ6IEE8 588 aa6.33□□□□□ -1.4
CNOT4-209ENST00000473470 GPR155Q7Z3F1 870 aa6.33□□□□□ -1.4
CNOT4-209ENST00000473470 CIR1Q86X95 450 aaPredicted RBP6.33□□□□□ -1.4
CNOT4-209ENST00000473470 DHX37Q8IY37 1157 aaKnown RBP6.33□□□□□ -1.4
CNOT4-209ENST00000473470 RTKN2Q8IZC4 609 aa6.33□□□□□ -1.4
CNOT4-209ENST00000473470 RPGRQ92834 1020 aaKnown RBP6.33□□□□□ -1.4
CNOT4-209ENST00000473470 FOXRED1Q96CU9 486 aaPredicted RBP6.33□□□□□ -1.4
CNOT4-209ENST00000473470 MAML3Q96JK9 1138 aa6.33□□□□□ -1.4
CNOT4-209ENST00000473470 IFT57Q9NWB7 429 aa6.33□□□□□ -1.4
CNOT4-209ENST00000473470 MAPRE3Q9UPY8 281 aa6.33□□□□□ -1.4
CNOT4-209ENST00000473470 CD40P25942 277 aa6.32□□□□□ -1.4
CNOT4-209ENST00000473470 CD83Q01151 205 aa6.32□□□□□ -1.4
CNOT4-209ENST00000473470 EFEMP1Q12805 493 aa6.32□□□□□ -1.4
CNOT4-209ENST00000473470 MOGSQ13724 837 aa6.32□□□□□ -1.4
CNOT4-209ENST00000473470 PRAMEF9Q5VWM5 478 aa6.32□□□□□ -1.4
CNOT4-209ENST00000473470 CREB3L3Q68CJ9 461 aa6.32□□□□□ -1.4
CNOT4-209ENST00000473470 LRSAM1Q6UWE0 723 aa6.32□□□□□ -1.4
CNOT4-209ENST00000473470 C11orf74Q86VG3 221 aa6.32□□□□□ -1.4
CNOT4-209ENST00000473470 PHYKPLQ8IUZ5 450 aa6.32□□□□□ -1.4
CNOT4-209ENST00000473470 OR5AN1Q8NGI8 311 aa6.32□□□□□ -1.4
CNOT4-209ENST00000473470 LPPQ93052 612 aa6.32□□□□□ -1.4
CNOT4-209ENST00000473470 SAMD11Q96NU1 681 aa6.32□□□□□ -1.4
CNOT4-209ENST00000473470 JADE2Q9NQC1 790 aa6.32□□□□□ -1.4
CNOT4-209ENST00000473470 OXSMQ9NWU1 459 aa6.32□□□□□ -1.4
CNOT4-209ENST00000473470 VWA7Q9Y334 891 aa6.32□□□□□ -1.4
CNOT4-209ENST00000473470 TTBK1Q5TCY1 1321 aaPredicted RBP6.31□□□□□ -1.4
CNOT4-209ENST00000473470 NPEPPSL1A6NEC2 478 aa6.31□□□□□ -1.4
CNOT4-209ENST00000473470 GSG1L2A8MUP6 293 aa6.31□□□□□ -1.4
CNOT4-209ENST00000473470 DVL2O14641 736 aa6.31□□□□□ -1.4
CNOT4-209ENST00000473470 PDE8AO60658 829 aa6.31□□□□□ -1.4
CNOT4-209ENST00000473470 CNOT4O95628 575 aaKnown RBP6.31□□□□□ -1.4
CNOT4-209ENST00000473470 ATP2A2P16615 1042 aaKnown RBP6.31□□□□□ -1.4
CNOT4-209ENST00000473470 SCNN1BP51168 640 aa6.31□□□□□ -1.4
CNOT4-209ENST00000473470 KCNQ1P51787 676 aa6.31□□□□□ -1.4
CNOT4-209ENST00000473470 KPNA1P52294 538 aaPredicted RBP6.31□□□□□ -1.4
CNOT4-209ENST00000473470 BCAR1P56945 870 aa6.31□□□□□ -1.4
CNOT4-209ENST00000473470 RAC3P60763 192 aa6.31□□□□□ -1.4
CNOT4-209ENST00000473470 SLC6A3Q01959 620 aa6.31□□□□□ -1.4
CNOT4-209ENST00000473470 NFYCQ13952 458 aa6.31□□□□□ -1.4
CNOT4-209ENST00000473470 SKOR2Q2VWA4 1001 aaPredicted RBP6.31□□□□□ -1.4
CNOT4-209ENST00000473470 GPR158Q5T848 1215 aa6.31□□□□□ -1.4
CNOT4-209ENST00000473470 AGBL4Q5VU57 503 aa6.31□□□□□ -1.4
CNOT4-209ENST00000473470 C16orf92Q96LL3 132 aa6.31□□□□□ -1.4
CNOT4-209ENST00000473470 MEGF9Q9H1U4 602 aa6.31□□□□□ -1.4
CNOT4-209ENST00000473470 OR10A2Q9H208 303 aa6.31□□□□□ -1.4
CNOT4-209ENST00000473470 TOMM22Q9NS69 142 aa6.31□□□□□ -1.4
CNOT4-209ENST00000473470 TARBP1Q13395 1621 aaKnown RBP6.31□□□□□ -1.4
CNOT4-209ENST00000473470 ZNF891A8MT65 544 aaPredicted RBP6.3□□□□□ -1.4
CNOT4-209ENST00000473470 B4GALT4O60513 344 aa6.3□□□□□ -1.4
CNOT4-209ENST00000473470 ZNF888P0CJ79 500 aaPredicted RBP6.3□□□□□ -1.4
CNOT4-209ENST00000473470 SOX5P35711 763 aa6.3□□□□□ -1.4
CNOT4-209ENST00000473470 LSSP48449 732 aa6.3□□□□□ -1.4
CNOT4-209ENST00000473470 RRADP55042 308 aa6.3□□□□□ -1.4
CNOT4-209ENST00000473470 IL2P60568 153 aa6.3□□□□□ -1.4
CNOT4-209ENST00000473470 LRRC32Q14392 662 aa6.3□□□□□ -1.4
CNOT4-209ENST00000473470 DGKDQ16760 1214 aa6.3□□□□□ -1.4
CNOT4-209ENST00000473470 C21orf62-AS1Q17RA5 79 aa6.3□□□□□ -1.4
CNOT4-209ENST00000473470 TIGD7Q6NT04 549 aaPredicted RBP6.3□□□□□ -1.4
CNOT4-209ENST00000473470 ESRP1Q6NXG1 681 aaKnown RBP6.3□□□□□ -1.4
CNOT4-209ENST00000473470 SMC1BQ8NDV3 1235 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms