RNA–Protein interactions for RNA: ENST00000473405.1

CCDC88B-206, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 1 (best)

Gene CCDC88B, Length 783 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-206ENST00000473405 B3GNT9Q6UX72 402 aa21.22■□□□□ 0.99
CCDC88B-206ENST00000473405 FAM43BQ6ZT52 329 aaPredicted RBP21.22■□□□□ 0.99
CCDC88B-206ENST00000473405 ETNPPLQ8TBG4 499 aa21.22■□□□□ 0.99
CCDC88B-206ENST00000473405 ADAM2Q99965 735 aa21.22■□□□□ 0.99
CCDC88B-206ENST00000473405 TEKT3Q9BXF9 490 aa21.22■□□□□ 0.99
CCDC88B-206ENST00000473405 C22orf23Q9BZE7 217 aa21.22■□□□□ 0.99
CCDC88B-206ENST00000473405 ALG13Q9NP73 1137 aaKnown RBP21.22■□□□□ 0.99
CCDC88B-206ENST00000473405 CD320Q9NPF0 282 aa21.22■□□□□ 0.99
CCDC88B-206ENST00000473405 RGS18Q9NS28 235 aa21.22■□□□□ 0.99
CCDC88B-206ENST00000473405 PLAGL2Q9UPG8 496 aa21.22■□□□□ 0.99
CCDC88B-206ENST00000473405 C9IYK1 514 aa21.21■□□□□ 0.99
CCDC88B-206ENST00000473405 H3BQ06 376 aaPredicted RBP21.21■□□□□ 0.99
CCDC88B-206ENST00000473405 MAGEB2O15479 319 aa21.21■□□□□ 0.99
CCDC88B-206ENST00000473405 DNAJB1P25685 340 aa21.21■□□□□ 0.99
CCDC88B-206ENST00000473405 GALNT17Q6IS24 598 aa21.21■□□□□ 0.99
CCDC88B-206ENST00000473405 CPLX2Q6PUV4 134 aaKnown RBP21.21■□□□□ 0.99
CCDC88B-206ENST00000473405 LRRC71Q8N4P6 559 aa21.21■□□□□ 0.99
CCDC88B-206ENST00000473405 KHSRPQ92945 711 aaKnown RBP eCLIP21.21■□□□□ 0.99
CCDC88B-206ENST00000473405 P2RX5Q93086 422 aa21.21■□□□□ 0.99
CCDC88B-206ENST00000473405 LRFN2Q9ULH4 789 aa21.21■□□□□ 0.99
CCDC88B-206ENST00000473405 TPCN1Q9ULQ1 816 aa21.21■□□□□ 0.99
CCDC88B-206ENST00000473405 KCNJ14Q9UNX9 436 aa21.21■□□□□ 0.99
CCDC88B-206ENST00000473405 DENND3A2RUS2 1198 aa21.2■□□□□ 0.98
CCDC88B-206ENST00000473405 GPR182O15218 404 aa21.2■□□□□ 0.98
CCDC88B-206ENST00000473405 ITGB1P05556 798 aa21.2■□□□□ 0.98
CCDC88B-206ENST00000473405 IL9P15248 144 aa21.2■□□□□ 0.98
CCDC88B-206ENST00000473405 IBSPP21815 317 aaPredicted RBP21.2■□□□□ 0.98
CCDC88B-206ENST00000473405 HYAL1Q12794 435 aa21.2■□□□□ 0.98
CCDC88B-206ENST00000473405 DSC3Q14574 896 aa21.2■□□□□ 0.98
CCDC88B-206ENST00000473405 CTC1Q2NKJ3 1217 aa21.2■□□□□ 0.98
CCDC88B-206ENST00000473405 PTCRAQ6ISU1 281 aaPredicted RBP21.2■□□□□ 0.98
CCDC88B-206ENST00000473405 EFCAB12Q6NXP0 572 aa21.2■□□□□ 0.98
CCDC88B-206ENST00000473405 MOXD1Q6UVY6 613 aa21.2■□□□□ 0.98
CCDC88B-206ENST00000473405 SLC24A5Q71RS6 500 aa21.2■□□□□ 0.98
CCDC88B-206ENST00000473405 RDM1Q8NG50 284 aa21.2■□□□□ 0.98
CCDC88B-206ENST00000473405 PHF20Q9BVI0 1012 aa21.2■□□□□ 0.98
CCDC88B-206ENST00000473405 ADAMTS10Q9H324 1103 aa21.2■□□□□ 0.98
CCDC88B-206ENST00000473405 C1orf112Q9NSG2 853 aa21.2■□□□□ 0.98
CCDC88B-206ENST00000473405 AKT3Q9Y243 479 aa21.2■□□□□ 0.98
CCDC88B-206ENST00000473405 STK36Q9NRP7 1315 aa21.2■□□□□ 0.98
CCDC88B-206ENST00000473405 GRXCR2A6NFK2 248 aa21.19■□□□□ 0.98
CCDC88B-206ENST00000473405 SLC37A4O43826 429 aa21.19■□□□□ 0.98
CCDC88B-206ENST00000473405 DTNBO60941 627 aa21.19■□□□□ 0.98
CCDC88B-206ENST00000473405 CSPG5O95196 566 aa21.19■□□□□ 0.98
CCDC88B-206ENST00000473405 LTBRP36941 435 aa21.19■□□□□ 0.98
CCDC88B-206ENST00000473405 NLRP11P59045 1033 aaKnown RBP21.19■□□□□ 0.98
CCDC88B-206ENST00000473405 NONOQ15233 471 aaKnown RBP eCLIP21.19■□□□□ 0.98
CCDC88B-206ENST00000473405 TARBP2Q15633 366 aaKnown RBP21.19■□□□□ 0.98
CCDC88B-206ENST00000473405 INF2Q27J81 1249 aa21.19■□□□□ 0.98
CCDC88B-206ENST00000473405 ODR4Q5SWX8 454 aa21.19■□□□□ 0.98
CCDC88B-206ENST00000473405 FAM178BQ8IXR5 827 aa21.19■□□□□ 0.98
CCDC88B-206ENST00000473405 KLHL23Q8NBE8 558 aa21.19■□□□□ 0.98
CCDC88B-206ENST00000473405 MAP7D2Q96T17 732 aa21.19■□□□□ 0.98
CCDC88B-206ENST00000473405 PCDHB7Q9Y5E2 793 aa21.19■□□□□ 0.98
CCDC88B-206ENST00000473405 ARID2Q68CP9 1835 aa21.19■□□□□ 0.98
CCDC88B-206ENST00000473405 TMEM150BA6NC51 233 aa21.18■□□□□ 0.98
CCDC88B-206ENST00000473405 PFKFB2O60825 505 aa21.18■□□□□ 0.98
CCDC88B-206ENST00000473405 CDKL5O76039 1030 aa21.18■□□□□ 0.98
CCDC88B-206ENST00000473405 STBD1O95210 358 aa21.18■□□□□ 0.98
CCDC88B-206ENST00000473405 NAALADL2Q58DX5 795 aa21.18■□□□□ 0.98
CCDC88B-206ENST00000473405 FAM102BQ5T8I3 360 aa21.18■□□□□ 0.98
CCDC88B-206ENST00000473405 MIER3Q7Z3K6 550 aa21.18■□□□□ 0.98
CCDC88B-206ENST00000473405 KRT25Q7Z3Z0 450 aa21.18■□□□□ 0.98
CCDC88B-206ENST00000473405 SPPL3Q8TCT6 385 aa21.18■□□□□ 0.98
CCDC88B-206ENST00000473405 CEP89Q96ST8 783 aa21.18■□□□□ 0.98
CCDC88B-206ENST00000473405 NRBP2Q9NSY0 501 aa21.18■□□□□ 0.98
CCDC88B-206ENST00000473405 GJB4Q9NTQ9 266 aa21.18■□□□□ 0.98
CCDC88B-206ENST00000473405 PPP4R2Q9NY27 417 aa21.18■□□□□ 0.98
CCDC88B-206ENST00000473405 CLDND1Q9NY35 253 aa21.18■□□□□ 0.98
CCDC88B-206ENST00000473405 HCSTQ9UBK5 93 aa21.18■□□□□ 0.98
CCDC88B-206ENST00000473405 WDFY4Q6ZS81 3184 aa21.17■□□□□ 0.98
CCDC88B-206ENST00000473405 CTDNEP1O95476 244 aa21.17■□□□□ 0.98
CCDC88B-206ENST00000473405 TMOD1P28289 359 aa21.17■□□□□ 0.98
CCDC88B-206ENST00000473405 GTF2F1P35269 517 aaKnown RBP eCLIP21.17■□□□□ 0.98
CCDC88B-206ENST00000473405 ANAPC15P60006 121 aa21.17■□□□□ 0.98
CCDC88B-206ENST00000473405 FAM189BP81408 668 aa21.17■□□□□ 0.98
CCDC88B-206ENST00000473405 SLKQ9H2G2 1235 aaPredicted RBP21.17■□□□□ 0.98
CCDC88B-206ENST00000473405 EPHX3Q9H6B9 360 aa21.17■□□□□ 0.98
CCDC88B-206ENST00000473405 TMEM161AQ9NX61 479 aa21.17■□□□□ 0.98
CCDC88B-206ENST00000473405 DDX25Q9UHL0 483 aaKnown RBP21.17■□□□□ 0.98
CCDC88B-206ENST00000473405 TBKBP1A7MCY6 615 aa21.16■□□□□ 0.98
CCDC88B-206ENST00000473405 NCK2O43639 380 aa21.16■□□□□ 0.98
CCDC88B-206ENST00000473405 FGFR1P11362 822 aa21.16■□□□□ 0.98
CCDC88B-206ENST00000473405 COL9A1P20849 921 aa21.16■□□□□ 0.98
CCDC88B-206ENST00000473405 EIF4BP23588 611 aaKnown RBP21.16■□□□□ 0.98
CCDC88B-206ENST00000473405 GPC3P51654 580 aa21.16■□□□□ 0.98
CCDC88B-206ENST00000473405 DLX2Q07687 328 aaPredicted RBP21.16■□□□□ 0.98
CCDC88B-206ENST00000473405 TBC1D8BQ0IIM8 1120 aa21.16■□□□□ 0.98
CCDC88B-206ENST00000473405 DRP2Q13474 957 aa21.16■□□□□ 0.98
CCDC88B-206ENST00000473405 PUS10Q3MIT2 529 aaKnown RBP21.16■□□□□ 0.98
CCDC88B-206ENST00000473405 EP400NLQ6ZTU2 488 aa21.16■□□□□ 0.98
CCDC88B-206ENST00000473405 ZNF668Q96K58 619 aaPredicted RBP21.16■□□□□ 0.98
CCDC88B-206ENST00000473405 C1QTNF1Q9BXJ1 281 aa21.16■□□□□ 0.98
CCDC88B-206ENST00000473405 NIFKQ9BYG3 293 aaKnown RBP21.16■□□□□ 0.98
CCDC88B-206ENST00000473405 SEPT9Q9UHD8 586 aaPredicted RBP21.16■□□□□ 0.98
CCDC88B-206ENST00000473405 VAV3Q9UKW4 847 aa21.16■□□□□ 0.98
CCDC88B-206ENST00000473405 TBX10O75333 385 aa21.15■□□□□ 0.98
CCDC88B-206ENST00000473405 IRS1P35568 1242 aa21.15■□□□□ 0.98
CCDC88B-206ENST00000473405 AK2P54819 239 aa21.15■□□□□ 0.98
CCDC88B-206ENST00000473405 LETM2Q2VYF4 491 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms