RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 NEMFO60524 1076 aa12.94□□□□□ -0.34
CPNE1-222ENST00000473373 ATP4AP20648 1035 aa12.94□□□□□ -0.34
CPNE1-222ENST00000473373 RBM25P49756 843 aaKnown RBP12.94□□□□□ -0.34
CPNE1-222ENST00000473373 PSMC5P62195 406 aa12.94□□□□□ -0.34
CPNE1-222ENST00000473373 UGCGQ16739 394 aa12.94□□□□□ -0.34
CPNE1-222ENST00000473373 KIZQ2M2Z5 673 aa12.94□□□□□ -0.34
CPNE1-222ENST00000473373 TMEM266Q2M3C6 531 aa12.94□□□□□ -0.34
CPNE1-222ENST00000473373 XKR3Q5GH77 459 aa12.94□□□□□ -0.34
CPNE1-222ENST00000473373 ETNPPLQ8TBG4 499 aa12.94□□□□□ -0.34
CPNE1-222ENST00000473373 NLRP7Q8WX94 980 aa12.94□□□□□ -0.34
CPNE1-222ENST00000473373 OSMRQ99650 979 aa12.94□□□□□ -0.34
CPNE1-222ENST00000473373 OSBPL7Q9BZF2 842 aa12.94□□□□□ -0.34
CPNE1-222ENST00000473373 KIAA1671Q9BY89 1806 aa12.94□□□□□ -0.34
CPNE1-222ENST00000473373 MUC3AQ02505 3323 aa12.93□□□□□ -0.34
CPNE1-222ENST00000473373 TBX3O15119 743 aa12.93□□□□□ -0.34
CPNE1-222ENST00000473373 GPR182O15218 404 aa12.93□□□□□ -0.34
CPNE1-222ENST00000473373 C22orf31O95567 290 aa12.93□□□□□ -0.34
CPNE1-222ENST00000473373 STAG3L1P0CL83 205 aa12.93□□□□□ -0.34
CPNE1-222ENST00000473373 BMP1P13497 986 aa12.93□□□□□ -0.34
CPNE1-222ENST00000473373 MCM7P33993 719 aa12.93□□□□□ -0.34
CPNE1-222ENST00000473373 TXKP42681 527 aa12.93□□□□□ -0.34
CPNE1-222ENST00000473373 QARSP47897 775 aaKnown RBP12.93□□□□□ -0.34
CPNE1-222ENST00000473373 KCNQ1P51787 676 aa12.93□□□□□ -0.34
CPNE1-222ENST00000473373 SPOUT1Q5T280 376 aaKnown RBP12.93□□□□□ -0.34
CPNE1-222ENST00000473373 FBXO22Q8NEZ5 403 aa12.93□□□□□ -0.34
CPNE1-222ENST00000473373 ZNF668Q96K58 619 aaPredicted RBP12.93□□□□□ -0.34
CPNE1-222ENST00000473373 MBOAT7Q96N66 472 aa12.93□□□□□ -0.34
CPNE1-222ENST00000473373 PADI3Q9ULW8 664 aa12.93□□□□□ -0.34
CPNE1-222ENST00000473373 NOL7Q9UMY1 257 aaKnown RBP12.93□□□□□ -0.34
CPNE1-222ENST00000473373 PCDHA12Q9UN75 941 aa12.93□□□□□ -0.34
CPNE1-222ENST00000473373 SQORQ9Y6N5 450 aa12.93□□□□□ -0.34
CPNE1-222ENST00000473373 PRRC2BQ5JSZ5 2229 aaKnown RBP12.92□□□□□ -0.34
CPNE1-222ENST00000473373 LINC01553A4QN01 128 aa12.92□□□□□ -0.34
CPNE1-222ENST00000473373 EDIL3O43854 480 aa12.92□□□□□ -0.34
CPNE1-222ENST00000473373 ZNF862O60290 1169 aa12.92□□□□□ -0.34
CPNE1-222ENST00000473373 P4HBP07237 508 aaKnown RBP12.92□□□□□ -0.34
CPNE1-222ENST00000473373 ZSCAN20P17040 1043 aaPredicted RBP12.92□□□□□ -0.34
CPNE1-222ENST00000473373 PLA2G5P39877 138 aa12.92□□□□□ -0.34
CPNE1-222ENST00000473373 CRYBB1P53674 252 aaPredicted RBP12.92□□□□□ -0.34
CPNE1-222ENST00000473373 POLGP54098 1239 aaPredicted RBP12.92□□□□□ -0.34
CPNE1-222ENST00000473373 NLRP11P59045 1033 aaKnown RBP12.92□□□□□ -0.34
CPNE1-222ENST00000473373 CYP4A11Q02928 519 aa12.92□□□□□ -0.34
CPNE1-222ENST00000473373 PPP2R5CQ13362 524 aa12.92□□□□□ -0.34
CPNE1-222ENST00000473373 FNDC1Q4ZHG4 1894 aaPredicted RBP12.92□□□□□ -0.34
CPNE1-222ENST00000473373 EARS2Q5JPH6 523 aaKnown RBP12.92□□□□□ -0.34
CPNE1-222ENST00000473373 MCTP1Q6DN14 999 aa12.92□□□□□ -0.34
CPNE1-222ENST00000473373 OTUD6AQ7L8S5 288 aa12.92□□□□□ -0.34
CPNE1-222ENST00000473373 TPH2Q8IWU9 490 aa12.92□□□□□ -0.34
CPNE1-222ENST00000473373 KIAA0319LQ8IZA0 1049 aa12.92□□□□□ -0.34
CPNE1-222ENST00000473373 FIBCD1Q8N539 461 aa12.92□□□□□ -0.34
CPNE1-222ENST00000473373 GDPD5Q8WTR4 605 aa12.92□□□□□ -0.34
CPNE1-222ENST00000473373 TOP1MTQ969P6 601 aa12.92□□□□□ -0.34
CPNE1-222ENST00000473373 FAM122AQ96E09 287 aa12.92□□□□□ -0.34
CPNE1-222ENST00000473373 JPH2Q9BR39 696 aaPredicted RBP12.92□□□□□ -0.34
CPNE1-222ENST00000473373 SH2D3AQ9BRG2 576 aa12.92□□□□□ -0.34
CPNE1-222ENST00000473373 AGO3Q9H9G7 860 aaKnown RBP12.92□□□□□ -0.34
CPNE1-222ENST00000473373 KCNMB3Q9NPA1 279 aa12.92□□□□□ -0.34
CPNE1-222ENST00000473373 KDM3AQ9Y4C1 1321 aa12.91□□□□□ -0.34
CPNE1-222ENST00000473373 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.91□□□□□ -0.34
CPNE1-222ENST00000473373 H3BQV1 296 aa12.91□□□□□ -0.34
CPNE1-222ENST00000473373 EML1O00423 815 aa12.91□□□□□ -0.34
CPNE1-222ENST00000473373 ENPP3O14638 875 aa12.91□□□□□ -0.34
CPNE1-222ENST00000473373 CTNNB1P35222 781 aa12.91□□□□□ -0.34
CPNE1-222ENST00000473373 MCM2P49736 904 aa12.91□□□□□ -0.34
CPNE1-222ENST00000473373 ST3GAL1Q11201 340 aa12.91□□□□□ -0.34
CPNE1-222ENST00000473373 BTG3Q14201 252 aaPredicted RBP12.91□□□□□ -0.34
CPNE1-222ENST00000473373 PAN2Q504Q3 1202 aaKnown RBP12.91□□□□□ -0.34
CPNE1-222ENST00000473373 PLA2G4FQ68DD2 849 aa12.91□□□□□ -0.34
CPNE1-222ENST00000473373 SLC7A3Q8WY07 619 aa12.91□□□□□ -0.34
CPNE1-222ENST00000473373 DYDC2Q96IM9 177 aa12.91□□□□□ -0.34
CPNE1-222ENST00000473373 CEP170P1Q96L14 293 aa12.91□□□□□ -0.34
CPNE1-222ENST00000473373 SAMD11Q96NU1 681 aa12.91□□□□□ -0.34
CPNE1-222ENST00000473373 KIF2CQ99661 725 aa12.91□□□□□ -0.34
CPNE1-222ENST00000473373 LXNQ9BS40 222 aa12.91□□□□□ -0.34
CPNE1-222ENST00000473373 TTC12Q9H892 705 aaPredicted RBP12.91□□□□□ -0.34
CPNE1-222ENST00000473373 BMP2KQ9NSY1 1161 aaPredicted RBP12.91□□□□□ -0.34
CPNE1-222ENST00000473373 NOC2LQ9Y3T9 749 aaKnown RBP12.91□□□□□ -0.34
CPNE1-222ENST00000473373 PCDHB7Q9Y5E2 793 aa12.91□□□□□ -0.34
CPNE1-222ENST00000473373 TCF20Q9UGU0 1960 aaKnown RBP12.9□□□□□ -0.34
CPNE1-222ENST00000473373 TMEM150BA6NC51 233 aa12.9□□□□□ -0.34
CPNE1-222ENST00000473373 ZBTB42B2RXF5 422 aa12.9□□□□□ -0.34
CPNE1-222ENST00000473373 ARHGEF15O94989 841 aa12.9□□□□□ -0.34
CPNE1-222ENST00000473373 CSPG5O95196 566 aa12.9□□□□□ -0.34
CPNE1-222ENST00000473373 CTTNQ14247 550 aaKnown RBP12.9□□□□□ -0.34
CPNE1-222ENST00000473373 EPHA7Q15375 998 aa12.9□□□□□ -0.34
CPNE1-222ENST00000473373 XKR9Q5GH70 373 aa12.9□□□□□ -0.34
CPNE1-222ENST00000473373 RHPN2Q8IUC4 686 aa12.9□□□□□ -0.34
CPNE1-222ENST00000473373 NPAS4Q8IUM7 802 aa12.9□□□□□ -0.34
CPNE1-222ENST00000473373 EXOC8Q8IYI6 725 aa12.9□□□□□ -0.34
CPNE1-222ENST00000473373 ZNF710Q8N1W2 664 aa12.9□□□□□ -0.34
CPNE1-222ENST00000473373 NLRP4Q96MN2 994 aa12.9□□□□□ -0.34
CPNE1-222ENST00000473373 ADAM2Q99965 735 aa12.9□□□□□ -0.34
CPNE1-222ENST00000473373 C17orf80Q9BSJ5 609 aa12.9□□□□□ -0.34
CPNE1-222ENST00000473373 FOXP1Q9H334 677 aaPredicted RBP12.9□□□□□ -0.34
CPNE1-222ENST00000473373 CDHR5Q9HBB8 845 aa12.9□□□□□ -0.34
CPNE1-222ENST00000473373 VAV3Q9UKW4 847 aa12.9□□□□□ -0.34
CPNE1-222ENST00000473373 ST3GAL5Q9UNP4 418 aa12.9□□□□□ -0.34
CPNE1-222ENST00000473373 BDP1A6H8Y1 2624 aa12.9□□□□□ -0.35
CPNE1-222ENST00000473373 ADGRA3Q8IWK6 1321 aa12.89□□□□□ -0.35
CPNE1-222ENST00000473373 MYH11P35749 1972 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms