RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 OATP04181 439 aa17.26■□□□□ 0.35
VTI1A-203ENST00000472892 JAK3P52333 1124 aa17.26■□□□□ 0.35
VTI1A-203ENST00000472892 FAM189BP81408 668 aa17.26■□□□□ 0.35
VTI1A-203ENST00000472892 SCRN1Q12765 414 aa17.26■□□□□ 0.35
VTI1A-203ENST00000472892 NAALADL2Q58DX5 795 aa17.26■□□□□ 0.35
VTI1A-203ENST00000472892 ERICH6BQ5W0A0 696 aa17.26■□□□□ 0.35
VTI1A-203ENST00000472892 EFCAB12Q6NXP0 572 aa17.26■□□□□ 0.35
VTI1A-203ENST00000472892 B3GNT9Q6UX72 402 aa17.26■□□□□ 0.35
VTI1A-203ENST00000472892 SLC24A5Q71RS6 500 aa17.26■□□□□ 0.35
VTI1A-203ENST00000472892 ZNF710Q8N1W2 664 aa17.26■□□□□ 0.35
VTI1A-203ENST00000472892 RDM1Q8NG50 284 aa17.26■□□□□ 0.35
VTI1A-203ENST00000472892 PABPC5Q96DU9 382 aaKnown RBP17.26■□□□□ 0.35
VTI1A-203ENST00000472892 OSMRQ99650 979 aa17.26■□□□□ 0.35
VTI1A-203ENST00000472892 ADAM2Q99965 735 aa17.26■□□□□ 0.35
VTI1A-203ENST00000472892 LRFN2Q9ULH4 789 aa17.26■□□□□ 0.35
VTI1A-203ENST00000472892 PLAGL2Q9UPG8 496 aa17.26■□□□□ 0.35
VTI1A-203ENST00000472892 NLRC5Q86WI3 1866 aa17.26■□□□□ 0.35
VTI1A-203ENST00000472892 BRWD1Q9NSI6 2320 aa17.25■□□□□ 0.35
VTI1A-203ENST00000472892 C9IYK1 514 aa17.25■□□□□ 0.35
VTI1A-203ENST00000472892 CHMP2AO43633 222 aa17.25■□□□□ 0.35
VTI1A-203ENST00000472892 NCK2O43639 380 aa17.25■□□□□ 0.35
VTI1A-203ENST00000472892 PFKFB2O60825 505 aa17.25■□□□□ 0.35
VTI1A-203ENST00000472892 CDKL5O76039 1030 aa17.25■□□□□ 0.35
VTI1A-203ENST00000472892 TDP2O95551 362 aa17.25■□□□□ 0.35
VTI1A-203ENST00000472892 TMOD1P28289 359 aa17.25■□□□□ 0.35
VTI1A-203ENST00000472892 ANAPC15P60006 121 aa17.25■□□□□ 0.35
VTI1A-203ENST00000472892 PRKCEQ02156 737 aa17.25■□□□□ 0.35
VTI1A-203ENST00000472892 CAMK1Q14012 370 aa17.25■□□□□ 0.35
VTI1A-203ENST00000472892 NONOQ15233 471 aaKnown RBP eCLIP17.25■□□□□ 0.35
VTI1A-203ENST00000472892 UGCGQ16739 394 aa17.25■□□□□ 0.35
VTI1A-203ENST00000472892 PUS10Q3MIT2 529 aaKnown RBP17.25■□□□□ 0.35
VTI1A-203ENST00000472892 FAM228AQ86W67 206 aa17.25■□□□□ 0.35
VTI1A-203ENST00000472892 ETNPPLQ8TBG4 499 aa17.25■□□□□ 0.35
VTI1A-203ENST00000472892 PPP1R16BQ96T49 567 aa17.25■□□□□ 0.35
VTI1A-203ENST00000472892 PHF20Q9BVI0 1012 aa17.25■□□□□ 0.35
VTI1A-203ENST00000472892 NIFKQ9BYG3 293 aaKnown RBP17.25■□□□□ 0.35
VTI1A-203ENST00000472892 SLKQ9H2G2 1235 aaPredicted RBP17.25■□□□□ 0.35
VTI1A-203ENST00000472892 ADAMTS10Q9H324 1103 aa17.25■□□□□ 0.35
VTI1A-203ENST00000472892 ALG13Q9NP73 1137 aaKnown RBP17.25■□□□□ 0.35
VTI1A-203ENST00000472892 TPCN1Q9ULQ1 816 aa17.25■□□□□ 0.35
VTI1A-203ENST00000472892 LOXHD1Q8IVV2 1947 aa17.25■□□□□ 0.35
VTI1A-203ENST00000472892 DENND3A2RUS2 1198 aa17.24■□□□□ 0.35
VTI1A-203ENST00000472892 GRXCR2A6NFK2 248 aa17.24■□□□□ 0.35
VTI1A-203ENST00000472892 STBD1O95210 358 aa17.24■□□□□ 0.35
VTI1A-203ENST00000472892 MMP1P03956 469 aa17.24■□□□□ 0.35
VTI1A-203ENST00000472892 GATMP50440 423 aa17.24■□□□□ 0.35
VTI1A-203ENST00000472892 CLCN3P51790 818 aa17.24■□□□□ 0.35
VTI1A-203ENST00000472892 NLRP11P59045 1033 aaKnown RBP17.24■□□□□ 0.35
VTI1A-203ENST00000472892 DSC3Q14574 896 aa17.24■□□□□ 0.35
VTI1A-203ENST00000472892 TARBP2Q15633 366 aaKnown RBP17.24■□□□□ 0.35
VTI1A-203ENST00000472892 CTC1Q2NKJ3 1217 aa17.24■□□□□ 0.35
VTI1A-203ENST00000472892 PAN2Q504Q3 1202 aaKnown RBP17.24■□□□□ 0.35
VTI1A-203ENST00000472892 MIER3Q7Z3K6 550 aa17.24■□□□□ 0.35
VTI1A-203ENST00000472892 KRT25Q7Z3Z0 450 aa17.24■□□□□ 0.35
VTI1A-203ENST00000472892 SPPL3Q8TCT6 385 aa17.24■□□□□ 0.35
VTI1A-203ENST00000472892 MAP7D2Q96T17 732 aa17.24■□□□□ 0.35
VTI1A-203ENST00000472892 KCNJ14Q9UNX9 436 aa17.24■□□□□ 0.35
VTI1A-203ENST00000472892 MYH9P35579 1960 aaKnown RBP17.24■□□□□ 0.35
VTI1A-203ENST00000472892 STK36Q9NRP7 1315 aa17.23■□□□□ 0.35
VTI1A-203ENST00000472892 EVPLQ92817 2033 aa17.23■□□□□ 0.35
VTI1A-203ENST00000472892 ITGB1P05556 798 aa17.23■□□□□ 0.35
VTI1A-203ENST00000472892 EIF4BP23588 611 aaKnown RBP17.23■□□□□ 0.35
VTI1A-203ENST00000472892 INF2Q27J81 1249 aa17.23■□□□□ 0.35
VTI1A-203ENST00000472892 FAM102BQ5T8I3 360 aa17.23■□□□□ 0.35
VTI1A-203ENST00000472892 PTCRAQ6ISU1 281 aaPredicted RBP17.23■□□□□ 0.35
VTI1A-203ENST00000472892 FAM178BQ8IXR5 827 aa17.23■□□□□ 0.35
VTI1A-203ENST00000472892 LRRC71Q8N4P6 559 aa17.23■□□□□ 0.35
VTI1A-203ENST00000472892 KLHL23Q8NBE8 558 aa17.23■□□□□ 0.35
VTI1A-203ENST00000472892 CEP89Q96ST8 783 aa17.23■□□□□ 0.35
VTI1A-203ENST00000472892 C1QTNF1Q9BXJ1 281 aa17.23■□□□□ 0.35
VTI1A-203ENST00000472892 ELAC1Q9H777 363 aaKnown RBP17.23■□□□□ 0.35
VTI1A-203ENST00000472892 CD320Q9NPF0 282 aa17.23■□□□□ 0.35
VTI1A-203ENST00000472892 DDX25Q9UHL0 483 aaKnown RBP17.23■□□□□ 0.35
VTI1A-203ENST00000472892 AKT3Q9Y243 479 aa17.23■□□□□ 0.35
VTI1A-203ENST00000472892 H3BQ06 376 aaPredicted RBP17.22■□□□□ 0.35
VTI1A-203ENST00000472892 IL9P15248 144 aa17.22■□□□□ 0.35
VTI1A-203ENST00000472892 DNAJB1P25685 340 aa17.22■□□□□ 0.35
VTI1A-203ENST00000472892 LTBRP36941 435 aa17.22■□□□□ 0.35
VTI1A-203ENST00000472892 HYAL1Q12794 435 aa17.22■□□□□ 0.35
VTI1A-203ENST00000472892 XKR3Q5GH77 459 aa17.22■□□□□ 0.35
VTI1A-203ENST00000472892 TMEM161AQ9NX61 479 aa17.22■□□□□ 0.35
VTI1A-203ENST00000472892 CLDND1Q9NY35 253 aa17.22■□□□□ 0.35
VTI1A-203ENST00000472892 IGKV6-21A0A0C4DH24 114 aa17.21■□□□□ 0.35
VTI1A-203ENST00000472892 CTDNEP1O95476 244 aa17.21■□□□□ 0.35
VTI1A-203ENST00000472892 XBP1P17861 261 aa17.21■□□□□ 0.35
VTI1A-203ENST00000472892 GPC3P51654 580 aa17.21■□□□□ 0.35
VTI1A-203ENST00000472892 TBC1D8BQ0IIM8 1120 aa17.21■□□□□ 0.35
VTI1A-203ENST00000472892 ANKRD1Q15327 319 aa17.21■□□□□ 0.35
VTI1A-203ENST00000472892 LETM2Q2VYF4 491 aa17.21■□□□□ 0.35
VTI1A-203ENST00000472892 PPP4R3AQ6IN85 833 aa17.21■□□□□ 0.35
VTI1A-203ENST00000472892 EPHX3Q9H6B9 360 aa17.21■□□□□ 0.35
VTI1A-203ENST00000472892 ATP6V0A4Q9HBG4 840 aa17.21■□□□□ 0.35
VTI1A-203ENST00000472892 KCNMB3Q9NPA1 279 aa17.21■□□□□ 0.35
VTI1A-203ENST00000472892 CCDC194A0A1B0GVG4 234 aa17.2■□□□□ 0.34
VTI1A-203ENST00000472892 TBKBP1A7MCY6 615 aa17.2■□□□□ 0.34
VTI1A-203ENST00000472892 SLC37A4O43826 429 aa17.2■□□□□ 0.34
VTI1A-203ENST00000472892 DARSP14868 501 aaKnown RBP17.2■□□□□ 0.34
VTI1A-203ENST00000472892 IBSPP21815 317 aaPredicted RBP17.2■□□□□ 0.34
VTI1A-203ENST00000472892 AK2P54819 239 aa17.2■□□□□ 0.34
VTI1A-203ENST00000472892 CDC42EP1Q00587 391 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms