RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, human

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-223	ENST00000472807	TDP2	O95551	362 aa		10.06	□□□□□ -0.8
CHEK2-223	ENST00000472807	LINC00271	P0C7V0	271 aa		10.06	□□□□□ -0.8
CHEK2-223	ENST00000472807	CYP3A7	P24462	503 aa		10.06	□□□□□ -0.8
CHEK2-223	ENST00000472807	SARS	P49591	514 aa	Known RBP	10.06	□□□□□ -0.8
CHEK2-223	ENST00000472807	CLCN3	P51790	818 aa		10.06	□□□□□ -0.8
CHEK2-223	ENST00000472807	CRYBB1	P53674	252 aa	Predicted RBP	10.06	□□□□□ -0.8
CHEK2-223	ENST00000472807	ANAPC15	P60006	121 aa		10.06	□□□□□ -0.8
CHEK2-223	ENST00000472807	SCRN1	Q12765	414 aa		10.06	□□□□□ -0.8
CHEK2-223	ENST00000472807	NONO	Q15233	471 aa	Known RBP eCLIP	10.06	□□□□□ -0.8
CHEK2-223	ENST00000472807	ANKRD1	Q15327	319 aa		10.06	□□□□□ -0.8
CHEK2-223	ENST00000472807	LEXM	Q3ZCV2	418 aa		10.06	□□□□□ -0.8
CHEK2-223	ENST00000472807	PAN2	Q504Q3	1202 aa	Known RBP	10.06	□□□□□ -0.8
CHEK2-223	ENST00000472807	TCEAL5	Q5H9L2	206 aa		10.06	□□□□□ -0.8
CHEK2-223	ENST00000472807	ERICH6B	Q5W0A0	696 aa		10.06	□□□□□ -0.8
CHEK2-223	ENST00000472807	MOXD1	Q6UVY6	613 aa		10.06	□□□□□ -0.8
CHEK2-223	ENST00000472807	MIER3	Q7Z3K6	550 aa		10.06	□□□□□ -0.8
CHEK2-223	ENST00000472807	KRT25	Q7Z3Z0	450 aa		10.06	□□□□□ -0.8
CHEK2-223	ENST00000472807	RTN4RL1	Q86UN2	441 aa	Predicted RBP	10.06	□□□□□ -0.8
CHEK2-223	ENST00000472807	CRIPAK	Q8N1N5	446 aa		10.06	□□□□□ -0.8
CHEK2-223	ENST00000472807	ZNF710	Q8N1W2	664 aa		10.06	□□□□□ -0.8
CHEK2-223	ENST00000472807	TMEM40	Q8WWA1	233 aa		10.06	□□□□□ -0.8
CHEK2-223	ENST00000472807	SCLT1	Q96NL6	688 aa		10.06	□□□□□ -0.8
CHEK2-223	ENST00000472807	AIFM3	Q96NN9	605 aa		10.06	□□□□□ -0.8
CHEK2-223	ENST00000472807	UNC45A	Q9H3U1	944 aa		10.06	□□□□□ -0.8
CHEK2-223	ENST00000472807	ERVK-5	Q9HDB9	667 aa		10.06	□□□□□ -0.8
CHEK2-223	ENST00000472807	ST3GAL5	Q9UNP4	418 aa		10.06	□□□□□ -0.8
CHEK2-223	ENST00000472807	NOC2L	Q9Y3T9	749 aa	Known RBP	10.06	□□□□□ -0.8
CHEK2-223	ENST00000472807	PCDHB7	Q9Y5E2	793 aa		10.06	□□□□□ -0.8
CHEK2-223	ENST00000472807	MRPL42	Q9Y6G3	142 aa	Known RBP	10.06	□□□□□ -0.8
CHEK2-223	ENST00000472807	ATG2A	Q2TAZ0	1938 aa		10.05	□□□□□ -0.8
CHEK2-223	ENST00000472807	KIAA1671	Q9BY89	1806 aa		10.05	□□□□□ -0.8
CHEK2-223	ENST00000472807	CCDC194	A0A1B0GVG4	234 aa		10.05	□□□□□ -0.8
CHEK2-223	ENST00000472807		M0R2N6	131 aa		10.05	□□□□□ -0.8
CHEK2-223	ENST00000472807	GRM6	O15303	877 aa		10.05	□□□□□ -0.8
CHEK2-223	ENST00000472807	NCK2	O43639	380 aa		10.05	□□□□□ -0.8
CHEK2-223	ENST00000472807	MGEA5	O60502	916 aa		10.05	□□□□□ -0.8
CHEK2-223	ENST00000472807	EIF5B	O60841	1220 aa	Known RBP	10.05	□□□□□ -0.8
CHEK2-223	ENST00000472807	GPR32	O75388	356 aa		10.05	□□□□□ -0.8
CHEK2-223	ENST00000472807	PSMD10	O75832	226 aa		10.05	□□□□□ -0.8
CHEK2-223	ENST00000472807	CSPG5	O95196	566 aa		10.05	□□□□□ -0.8
CHEK2-223	ENST00000472807	MMP1	P03956	469 aa		10.05	□□□□□ -0.8
CHEK2-223	ENST00000472807	TBC1D8B	Q0IIM8	1120 aa		10.05	□□□□□ -0.8
CHEK2-223	ENST00000472807	UGCG	Q16739	394 aa		10.05	□□□□□ -0.8
CHEK2-223	ENST00000472807	INF2	Q27J81	1249 aa		10.05	□□□□□ -0.8
CHEK2-223	ENST00000472807	PUS10	Q3MIT2	529 aa	Known RBP	10.05	□□□□□ -0.8
CHEK2-223	ENST00000472807	NAALADL2	Q58DX5	795 aa		10.05	□□□□□ -0.8
CHEK2-223	ENST00000472807	EFCAB12	Q6NXP0	572 aa		10.05	□□□□□ -0.8
CHEK2-223	ENST00000472807	EP400NL	Q6ZTU2	488 aa		10.05	□□□□□ -0.8
CHEK2-223	ENST00000472807	SLC24A5	Q71RS6	500 aa		10.05	□□□□□ -0.8
CHEK2-223	ENST00000472807	WASF1	Q92558	559 aa		10.05	□□□□□ -0.8
CHEK2-223	ENST00000472807	P2RX5	Q93086	422 aa		10.05	□□□□□ -0.8
CHEK2-223	ENST00000472807	GJA10	Q969M2	543 aa		10.05	□□□□□ -0.8
CHEK2-223	ENST00000472807	PPP2R3C	Q969Q6	453 aa		10.05	□□□□□ -0.8
CHEK2-223	ENST00000472807	PABPC5	Q96DU9	382 aa	Known RBP	10.05	□□□□□ -0.8
CHEK2-223	ENST00000472807	ADAM2	Q99965	735 aa		10.05	□□□□□ -0.8
CHEK2-223	ENST00000472807	CDHR5	Q9HBB8	845 aa		10.05	□□□□□ -0.8
CHEK2-223	ENST00000472807	RGS18	Q9NS28	235 aa		10.05	□□□□□ -0.8
CHEK2-223	ENST00000472807	DDX25	Q9UHL0	483 aa	Known RBP	10.05	□□□□□ -0.8
CHEK2-223	ENST00000472807	KCNJ14	Q9UNX9	436 aa		10.05	□□□□□ -0.8
CHEK2-223	ENST00000472807	TRIO	O75962	3097 aa		10.04	□□□□□ -0.8
CHEK2-223	ENST00000472807	TBKBP1	A7MCY6	615 aa		10.04	□□□□□ -0.8
CHEK2-223	ENST00000472807	EDIL3	O43854	480 aa		10.04	□□□□□ -0.8
CHEK2-223	ENST00000472807	ZNF862	O60290	1169 aa		10.04	□□□□□ -0.8
CHEK2-223	ENST00000472807	PFKFB2	O60825	505 aa		10.04	□□□□□ -0.8
CHEK2-223	ENST00000472807	GCFC2	P16383	781 aa	Known RBP	10.04	□□□□□ -0.8
CHEK2-223	ENST00000472807	NLRP11	P59045	1033 aa	Known RBP	10.04	□□□□□ -0.8
CHEK2-223	ENST00000472807	NPY5R	Q15761	445 aa		10.04	□□□□□ -0.8
CHEK2-223	ENST00000472807	LETM2	Q2VYF4	491 aa		10.04	□□□□□ -0.8
CHEK2-223	ENST00000472807	XKR3	Q5GH77	459 aa		10.04	□□□□□ -0.8
CHEK2-223	ENST00000472807	PTCRA	Q6ISU1	281 aa	Predicted RBP	10.04	□□□□□ -0.8
CHEK2-223	ENST00000472807	FAM228A	Q86W67	206 aa		10.04	□□□□□ -0.8
CHEK2-223	ENST00000472807	LRRC71	Q8N4P6	559 aa		10.04	□□□□□ -0.8
CHEK2-223	ENST00000472807	ETNPPL	Q8TBG4	499 aa		10.04	□□□□□ -0.8
CHEK2-223	ENST00000472807	NLRP7	Q8WX94	980 aa		10.04	□□□□□ -0.8
CHEK2-223	ENST00000472807	MBOAT7	Q96N66	472 aa		10.04	□□□□□ -0.8
CHEK2-223	ENST00000472807	NAP1L4	Q99733	375 aa	Known RBP	10.04	□□□□□ -0.8
CHEK2-223	ENST00000472807	PHF20	Q9BVI0	1012 aa		10.04	□□□□□ -0.8
CHEK2-223	ENST00000472807	C1QTNF1	Q9BXJ1	281 aa		10.04	□□□□□ -0.8
CHEK2-223	ENST00000472807	ALG13	Q9NP73	1137 aa	Known RBP	10.04	□□□□□ -0.8
CHEK2-223	ENST00000472807	AAAS	Q9NRG9	546 aa		10.04	□□□□□ -0.8
CHEK2-223	ENST00000472807	CLDND1	Q9NY35	253 aa		10.04	□□□□□ -0.8
CHEK2-223	ENST00000472807	SEPT9	Q9UHD8	586 aa	Predicted RBP	10.04	□□□□□ -0.8
CHEK2-223	ENST00000472807	TPCN1	Q9ULQ1	816 aa		10.04	□□□□□ -0.8
CHEK2-223	ENST00000472807	PLAGL2	Q9UPG8	496 aa		10.04	□□□□□ -0.8
CHEK2-223	ENST00000472807	FAM50B	Q9Y247	325 aa		10.04	□□□□□ -0.8
CHEK2-223	ENST00000472807	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	10.04	□□□□□ -0.8
CHEK2-223	ENST00000472807		C9IYK1	514 aa		10.03	□□□□□ -0.8
CHEK2-223	ENST00000472807		H3BQ06	376 aa	Predicted RBP	10.03	□□□□□ -0.8
CHEK2-223	ENST00000472807	HOXA2	O43364	376 aa		10.03	□□□□□ -0.8
CHEK2-223	ENST00000472807	SLC37A4	O43826	429 aa		10.03	□□□□□ -0.8
CHEK2-223	ENST00000472807	ITGB1	P05556	798 aa		10.03	□□□□□ -0.8
CHEK2-223	ENST00000472807	ZSCAN20	P17040	1043 aa	Predicted RBP	10.03	□□□□□ -0.8
CHEK2-223	ENST00000472807	EIF4B	P23588	611 aa	Known RBP	10.03	□□□□□ -0.8
CHEK2-223	ENST00000472807	GATM	P50440	423 aa		10.03	□□□□□ -0.8
CHEK2-223	ENST00000472807	DNM2	P50570	870 aa		10.03	□□□□□ -0.8
CHEK2-223	ENST00000472807	GPC3	P51654	580 aa		10.03	□□□□□ -0.8
CHEK2-223	ENST00000472807	AK2	P54819	239 aa		10.03	□□□□□ -0.8
CHEK2-223	ENST00000472807	COL19A1	Q14993	1142 aa		10.03	□□□□□ -0.8
CHEK2-223	ENST00000472807	MTERF2	Q49AM1	385 aa		10.03	□□□□□ -0.8
CHEK2-223	ENST00000472807	SPOUT1	Q5T280	376 aa	Known RBP	10.03	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms