RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 HOXA7P31268 230 aaPredicted RBP16.47■□□□□ 0.23
UBXN11-213ENST00000472155 CASP8Q14790 479 aa16.47■□□□□ 0.23
UBXN11-213ENST00000472155 UTP14CQ5TAP6 766 aaKnown RBP16.47■□□□□ 0.23
UBXN11-213ENST00000472155 PRPF38AQ8NAV1 312 aaKnown RBP16.47■□□□□ 0.23
UBXN11-213ENST00000472155 SYTL5Q8TDW5 730 aaPredicted RBP16.47■□□□□ 0.23
UBXN11-213ENST00000472155 SYN2Q92777 582 aaPredicted RBP16.47■□□□□ 0.23
UBXN11-213ENST00000472155 ZKSCAN4Q969J2 545 aaPredicted RBP16.47■□□□□ 0.23
UBXN11-213ENST00000472155 SPAG5Q96R06 1193 aa16.47■□□□□ 0.23
UBXN11-213ENST00000472155 NACC1Q96RE7 527 aa16.47■□□□□ 0.23
UBXN11-213ENST00000472155 GPRC5CQ9NQ84 441 aa16.47■□□□□ 0.23
UBXN11-213ENST00000472155 ZHX2Q9Y6X8 837 aa16.47■□□□□ 0.23
UBXN11-213ENST00000472155 ATP8B1O43520 1251 aa16.46■□□□□ 0.23
UBXN11-213ENST00000472155 EPB41P11171 864 aaKnown RBP16.46■□□□□ 0.23
UBXN11-213ENST00000472155 MYCLP12524 364 aaPredicted RBP16.46■□□□□ 0.23
UBXN11-213ENST00000472155 VCAM1P19320 739 aa16.46■□□□□ 0.23
UBXN11-213ENST00000472155 RPS6P62753 249 aaKnown RBP16.46■□□□□ 0.23
UBXN11-213ENST00000472155 TKFCQ3LXA3 575 aa16.46■□□□□ 0.23
UBXN11-213ENST00000472155 IQCEQ6IPM2 695 aa16.46■□□□□ 0.23
UBXN11-213ENST00000472155 FAM186BQ8IYM0 893 aa16.46■□□□□ 0.23
UBXN11-213ENST00000472155 TAOK3Q9H2K8 898 aa16.46■□□□□ 0.23
UBXN11-213ENST00000472155 PCIF1Q9H4Z3 704 aa16.46■□□□□ 0.23
UBXN11-213ENST00000472155 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.46■□□□□ 0.232e-6■■■■■ 140.2
UBXN11-213ENST00000472155 AGPAT3Q9NRZ7 376 aa16.46■□□□□ 0.23
UBXN11-213ENST00000472155 SAMM50Q9Y512 469 aa16.46■□□□□ 0.23
UBXN11-213ENST00000472155 GJA3Q9Y6H8 435 aa16.46■□□□□ 0.23
UBXN11-213ENST00000472155 ERICH4A6NGS2 130 aa16.46■□□□□ 0.22
UBXN11-213ENST00000472155 TULP1O00294 542 aaPredicted RBP16.46■□□□□ 0.22
UBXN11-213ENST00000472155 WDR93Q6P2C0 686 aa16.46■□□□□ 0.22
UBXN11-213ENST00000472155 MIER3Q7Z3K6 550 aa16.46■□□□□ 0.22
UBXN11-213ENST00000472155 RPTORQ8N122 1335 aa16.45■□□□□ 0.22
UBXN11-213ENST00000472155 ARHGEF35A5YM69 484 aa16.45■□□□□ 0.22
UBXN11-213ENST00000472155 POTEB2H3BUK9 544 aa16.45■□□□□ 0.22
UBXN11-213ENST00000472155 SORBS3O60504 671 aa16.45■□□□□ 0.22
UBXN11-213ENST00000472155 PHACTR2O75167 634 aa16.45■□□□□ 0.22
UBXN11-213ENST00000472155 ZNF131P52739 623 aa16.45■□□□□ 0.22
UBXN11-213ENST00000472155 DLG4P78352 724 aa16.45■□□□□ 0.22
UBXN11-213ENST00000472155 PADI6Q6TGC4 694 aa16.45■□□□□ 0.22
UBXN11-213ENST00000472155 MICALL2Q8IY33 904 aa16.45■□□□□ 0.22
UBXN11-213ENST00000472155 SPATA4Q8NEY3 305 aa16.45■□□□□ 0.22
UBXN11-213ENST00000472155 JDP2Q8WYK2 163 aa16.45■□□□□ 0.22
UBXN11-213ENST00000472155 NOX5Q96PH1 765 aa16.45■□□□□ 0.22
UBXN11-213ENST00000472155 SLC38A10Q9HBR0 1119 aa16.45■□□□□ 0.22
UBXN11-213ENST00000472155 HACL1Q9UJ83 578 aa16.45■□□□□ 0.22
UBXN11-213ENST00000472155 GAP43P17677 238 aa16.45■□□□□ 0.22
UBXN11-213ENST00000472155 GMPSP49915 693 aaPredicted RBP16.45■□□□□ 0.22
UBXN11-213ENST00000472155 NAB2Q15742 525 aa16.45■□□□□ 0.22
UBXN11-213ENST00000472155 OLIG1Q8TAK6 271 aa16.45■□□□□ 0.22
UBXN11-213ENST00000472155 ATG4CQ96DT6 458 aa16.45■□□□□ 0.22
UBXN11-213ENST00000472155 GFPT2O94808 682 aa16.44■□□□□ 0.22
UBXN11-213ENST00000472155 DLK2Q6UY11 383 aa16.44■□□□□ 0.22
UBXN11-213ENST00000472155 NSMFQ6X4W1 530 aa16.44■□□□□ 0.22
UBXN11-213ENST00000472155 HDXQ7Z353 690 aa16.44■□□□□ 0.22
UBXN11-213ENST00000472155 ALS2CR12Q96Q35 445 aa16.44■□□□□ 0.22
UBXN11-213ENST00000472155 RPAP3Q9H6T3 665 aaPredicted RBP16.44■□□□□ 0.22
UBXN11-213ENST00000472155 AGO4Q9HCK5 861 aaKnown RBP16.44■□□□□ 0.22
UBXN11-213ENST00000472155 PLCB1Q9NQ66 1216 aa16.44■□□□□ 0.22
UBXN11-213ENST00000472155 RBM12Q9NTZ6 932 aaKnown RBP16.44■□□□□ 0.22
UBXN11-213ENST00000472155 GRID2IPA4D2P6 1211 aa16.44■□□□□ 0.22
UBXN11-213ENST00000472155 RPL13P26373 211 aaKnown RBP16.44■□□□□ 0.22
UBXN11-213ENST00000472155 NPEPPSP55786 919 aa16.44■□□□□ 0.22
UBXN11-213ENST00000472155 SOX10P56693 466 aa16.44■□□□□ 0.22
UBXN11-213ENST00000472155 SETQ01105 290 aaPredicted RBP16.44■□□□□ 0.22
UBXN11-213ENST00000472155 DALRD3Q5D0E6 543 aaKnown RBP16.44■□□□□ 0.22
UBXN11-213ENST00000472155 PLA2G4FQ68DD2 849 aa16.44■□□□□ 0.22
UBXN11-213ENST00000472155 GBP6Q6ZN66 633 aa16.44■□□□□ 0.22
UBXN11-213ENST00000472155 RIN2Q8WYP3 895 aaPredicted RBP16.44■□□□□ 0.22
UBXN11-213ENST00000472155 ELMO3Q96BJ8 720 aa16.44■□□□□ 0.22
UBXN11-213ENST00000472155 DEFB129Q9H1M3 183 aa16.44■□□□□ 0.22
UBXN11-213ENST00000472155 HYOU1Q9Y4L1 999 aa16.44■□□□□ 0.22
UBXN11-213ENST00000472155 STK24Q9Y6E0 443 aa16.44■□□□□ 0.22
UBXN11-213ENST00000472155 EIF3DO15371 548 aaKnown RBP eCLIP16.43■□□□□ 0.22
UBXN11-213ENST00000472155 PEX10O60683 326 aa16.43■□□□□ 0.22
UBXN11-213ENST00000472155 JAM2P57087 298 aa16.43■□□□□ 0.22
UBXN11-213ENST00000472155 CKAP4Q07065 602 aaKnown RBP16.43■□□□□ 0.22
UBXN11-213ENST00000472155 MTMR1Q13613 665 aa16.43■□□□□ 0.22
UBXN11-213ENST00000472155 ZSCAN5CA6NGD5 496 aaPredicted RBP16.43■□□□□ 0.22
UBXN11-213ENST00000472155 K7ENM7 598 aa16.43■□□□□ 0.22
UBXN11-213ENST00000472155 WDR46O15213 610 aaKnown RBP16.43■□□□□ 0.22
UBXN11-213ENST00000472155 SLC16A3O15427 465 aaKnown RBP16.43■□□□□ 0.22
UBXN11-213ENST00000472155 ERLIN1O75477 346 aa16.43■□□□□ 0.22
UBXN11-213ENST00000472155 CCNE2O96020 404 aa16.43■□□□□ 0.22
UBXN11-213ENST00000472155 PSMC2P35998 433 aaKnown RBP16.43■□□□□ 0.22
UBXN11-213ENST00000472155 BAG6P46379 1132 aa16.43■□□□□ 0.22
UBXN11-213ENST00000472155 TRAF1Q13077 416 aa16.43■□□□□ 0.22
UBXN11-213ENST00000472155 PGM5Q15124 567 aa16.43■□□□□ 0.22
UBXN11-213ENST00000472155 PROCA1Q8NCQ7 364 aaPredicted RBP16.43■□□□□ 0.22
UBXN11-213ENST00000472155 RIT2Q99578 217 aa16.43■□□□□ 0.22
UBXN11-213ENST00000472155 CBWD1Q9BRT8 395 aa16.43■□□□□ 0.22
UBXN11-213ENST00000472155 KIFC3Q9BVG8 833 aa16.43■□□□□ 0.22
UBXN11-213ENST00000472155 KIAA1683Q9H0B3 1180 aa16.43■□□□□ 0.22
UBXN11-213ENST00000472155 GBP3Q9H0R5 595 aa16.43■□□□□ 0.22
UBXN11-213ENST00000472155 NUCKS1Q9H1E3 243 aaKnown RBP16.43■□□□□ 0.22
UBXN11-213ENST00000472155 EHMT1Q9H9B1 1298 aa16.43■□□□□ 0.22
UBXN11-213ENST00000472155 NAGPAQ9UK23 515 aa16.43■□□□□ 0.22
UBXN11-213ENST00000472155 UBIAD1Q9Y5Z9 338 aa16.43■□□□□ 0.22
UBXN11-213ENST00000472155 TMCO5BA8MYB1 307 aa16.42■□□□□ 0.22
UBXN11-213ENST00000472155 PPP1R37O75864 691 aa16.42■□□□□ 0.22
UBXN11-213ENST00000472155 TNNT3P45378 269 aaPredicted RBP16.42■□□□□ 0.22
UBXN11-213ENST00000472155 FMO5P49326 533 aa16.42■□□□□ 0.22
UBXN11-213ENST00000472155 RARRES1P49788 294 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms